Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776434

Identifier: 119776434

GI number: 119776434

Start: 3928981

End: 3929283

Strand: Direct

Name: 119776434

Synonym: Sama_3302

Alternate gene names: NA

Gene position: 3928981-3929283 (Clockwise)

Preceding gene: 119776432

Following gene: 119776435

Centisome position: 91.24

GC content: 60.73

Gene sequence:

>303_bases
ATGACACACCGGTTTTTGCTGACACTCTTGTTTGGCGCCTGTCTGCACCTGGCAACGCCCATACCTGTCCTGGCCAAGGC
CTATGCCCAGATGAACAATCAGGGACAGCAGCAGTCGCTCAAAGTCACCAGTGGCGATCAGGCCGCCGGTATGGCCGCCA
GCCGCTATCCCGGGCGGGTGCTCAAGGTCAGCCGCAGCCAGGTGGGTGGCAACCCCGGCTACCGGGTCAAGATGGTCAGC
GACGACGGTAAAGTCTTTTACGTATCTGTGGATGCCCGTACCGGACGGGTTGGGAGAGACTGA

Upstream 100 bases:

>100_bases
TCCTGCTACAGGCTTACTGCGAGTTAAGTTGCTGTTCGTACTTTCCTTTACCGCAGGGGATCTTTTACACTGGCACCATT
GATACGCAGAGAGAAAAGAC

Downstream 100 bases:

>100_bases
CAATGCGCCTGTTACTGGTTGAAGACGATGCGGCCCTGGCCGCCAATTTGGGGGATCACCTCAGAGAAAACCTCTACAGC
GTGGATGTGGCCGCCGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MTHRFLLTLLFGACLHLATPIPVLAKAYAQMNNQGQQQSLKVTSGDQAAGMAASRYPGRVLKVSRSQVGGNPGYRVKMVS
DDGKVFYVSVDARTGRVGRD

Sequences:

>Translated_100_residues
MTHRFLLTLLFGACLHLATPIPVLAKAYAQMNNQGQQQSLKVTSGDQAAGMAASRYPGRVLKVSRSQVGGNPGYRVKMVS
DDGKVFYVSVDARTGRVGRD
>Mature_99_residues
THRFLLTLLFGACLHLATPIPVLAKAYAQMNNQGQQQSLKVTSGDQAAGMAASRYPGRVLKVSRSQVGGNPGYRVKMVSD
DGKVFYVSVDARTGRVGRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10784; Mature: 10652

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHRFLLTLLFGACLHLATPIPVLAKAYAQMNNQGQQQSLKVTSGDQAAGMAASRYPGRV
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCEE
LKVSRSQVGGNPGYRVKMVSDDGKVFYVSVDARTGRVGRD
EEEECHHCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
THRFLLTLLFGACLHLATPIPVLAKAYAQMNNQGQQQSLKVTSGDQAAGMAASRYPGRV
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCEE
LKVSRSQVGGNPGYRVKMVSDDGKVFYVSVDARTGRVGRD
EEEECHHCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA