Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is pgtC [H]

Identifier: 119776373

GI number: 119776373

Start: 3835051

End: 3836310

Strand: Direct

Name: pgtC [H]

Synonym: Sama_3241

Alternate gene names: 119776373

Gene position: 3835051-3836310 (Clockwise)

Preceding gene: 119776368

Following gene: 119776374

Centisome position: 89.06

GC content: 56.83

Gene sequence:

>1260_bases
ATGACACAAAAAAAACTGCTCGCCCTACTGTTGATGCTCTGGCTTGGCTGGCCAAATACCGGCCAGGCGAAAGAGAATTG
CCTGGTGATCCTCACCTCTTTCTCCGAGCTGCCATTTAAAGGATTGGTGGATAAGTTCTCGGCCAAAGAGCAGTGCGAAG
TGCGGGTGATATACCGCCGCACCCTGCCTGCCATCCGGCTGCTGACCGACGAGAACCAACCCCGCATCGATTTGGTGGTG
TCATCCTCCCCCACTCTGTTCCAGACCCTGCATCAACAACACCTGCTGGCACCTTTAGGGGAACTGCCCGCGGCCCCCGC
CTGGCTTAAACGCCACAGTCTGCCAGCTTCCGACTATGTGCTGCCGGTGGCCTATTCAGGGATTGGGCTGATGTTCAACC
GCGACTACTTGAATAAACACGGCCTGCCACAACCCCGCAGTTGGCAGGATCTGGCCCAGCCCGGGTTTAACGGCCATGTG
ATGATGAGTTCGCCCAGCCATTCCGGCACTACCCATATGATGGTGGAAAACATATTGCAATCAGAAGGGTGGGACGCGGG
ATGGGGACTGTTGATGCGCATAGGTGGTAACCTCGCCTCGTTGTCGGCCCGCAGTTTTGGGGTCAGCGATGCCATCAGCC
GTGGCTTGGTGGGCGCAGGGCCCGTGATAGATAACTATGCCAGTGTGGCCCGCAGCCATTTTGATTATGTGGGCTTTACC
TATTTGCCCGATACCGTGATTCTGCCCACCTACTGCGGCCTCACCGCCAAGGCTGAACACGCCGCCAAAGCCCGAGAGTT
TTTAAGCTTTTTACTGTCGCCCGAGGGGCAGGCTATTCTCACCGAGCCCGAATTTGCCAAAACGCCACTGAGTGACGGCA
AGCTGGCCAACAGCACTGCCTTTGTTATCGAAAAACAGCAACTTTTTATACGCAACAACGTGATTAAGGCGCTGTTTGAA
CAGGCCATCGCCCAGCAACTGCCCAAGCTTCGCTATACCTGGCTTGCCATCATCAAGGCACAGGGTGCCATGAAAGATAC
GCCGAAAAACCATGAGGTACTGACCCAGGCCATTGCCCTTGCCAGTAGGGTGCCCATCAGCGAGGCCGAAGCCATGTCGC
CCGATTTGCAGACGGTATTTGCCGACTACGAGCAACAGCCCTCGGCGCAGATGGAGCGCACCATGCAGGATTGGCGCATG
CAGGTGGCACAGCAGCTTGAGCAGGCCATGGCACTGGTTCGCACCCTGGAGTACCCCTGA

Upstream 100 bases:

>100_bases
CACCCTTGAAGACAGATTGTTGGAAAATAGGCCAACCTTGAGTCATAACCGACTCATCAGGTTGTAAAAAACGTTAAAAA
TTGATTAAAAAGTTTGAGCC

Downstream 100 bases:

>100_bases
TGTCCAAGTCTCACTCACCCCTTGGCAGAAGGCTCTTTATTGCCTTTTCGGCCATGTTGGGGCTGACACTGTTGGTCGGC
CTGACCAGCCTGCTGATGTG

Product: phosphoglycerate transport regulatory protein PgtC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MTQKKLLALLLMLWLGWPNTGQAKENCLVILTSFSELPFKGLVDKFSAKEQCEVRVIYRRTLPAIRLLTDENQPRIDLVV
SSSPTLFQTLHQQHLLAPLGELPAAPAWLKRHSLPASDYVLPVAYSGIGLMFNRDYLNKHGLPQPRSWQDLAQPGFNGHV
MMSSPSHSGTTHMMVENILQSEGWDAGWGLLMRIGGNLASLSARSFGVSDAISRGLVGAGPVIDNYASVARSHFDYVGFT
YLPDTVILPTYCGLTAKAEHAAKAREFLSFLLSPEGQAILTEPEFAKTPLSDGKLANSTAFVIEKQQLFIRNNVIKALFE
QAIAQQLPKLRYTWLAIIKAQGAMKDTPKNHEVLTQAIALASRVPISEAEAMSPDLQTVFADYEQQPSAQMERTMQDWRM
QVAQQLEQAMALVRTLEYP

Sequences:

>Translated_419_residues
MTQKKLLALLLMLWLGWPNTGQAKENCLVILTSFSELPFKGLVDKFSAKEQCEVRVIYRRTLPAIRLLTDENQPRIDLVV
SSSPTLFQTLHQQHLLAPLGELPAAPAWLKRHSLPASDYVLPVAYSGIGLMFNRDYLNKHGLPQPRSWQDLAQPGFNGHV
MMSSPSHSGTTHMMVENILQSEGWDAGWGLLMRIGGNLASLSARSFGVSDAISRGLVGAGPVIDNYASVARSHFDYVGFT
YLPDTVILPTYCGLTAKAEHAAKAREFLSFLLSPEGQAILTEPEFAKTPLSDGKLANSTAFVIEKQQLFIRNNVIKALFE
QAIAQQLPKLRYTWLAIIKAQGAMKDTPKNHEVLTQAIALASRVPISEAEAMSPDLQTVFADYEQQPSAQMERTMQDWRM
QVAQQLEQAMALVRTLEYP
>Mature_418_residues
TQKKLLALLLMLWLGWPNTGQAKENCLVILTSFSELPFKGLVDKFSAKEQCEVRVIYRRTLPAIRLLTDENQPRIDLVVS
SSPTLFQTLHQQHLLAPLGELPAAPAWLKRHSLPASDYVLPVAYSGIGLMFNRDYLNKHGLPQPRSWQDLAQPGFNGHVM
MSSPSHSGTTHMMVENILQSEGWDAGWGLLMRIGGNLASLSARSFGVSDAISRGLVGAGPVIDNYASVARSHFDYVGFTY
LPDTVILPTYCGLTAKAEHAAKAREFLSFLLSPEGQAILTEPEFAKTPLSDGKLANSTAFVIEKQQLFIRNNVIKALFEQ
AIAQQLPKLRYTWLAIIKAQGAMKDTPKNHEVLTQAIALASRVPISEAEAMSPDLQTVFADYEQQPSAQMERTMQDWRMQ
VAQQLEQAMALVRTLEYP

Specific function: Required for pgtP expression, it may act jointly with the pgtA/pgtB signaling proteins [H]

COG id: COG1840

COG function: function code P; ABC-type Fe3+ transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46531; Mature: 46400

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQKKLLALLLMLWLGWPNTGQAKENCLVILTSFSELPFKGLVDKFSAKEQCEVRVIYRR
CCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCEEEEEHH
TLPAIRLLTDENQPRIDLVVSSSPTLFQTLHQQHLLAPLGELPAAPAWLKRHSLPASDYV
CCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCE
LPVAYSGIGLMFNRDYLNKHGLPQPRSWQDLAQPGFNGHVMMSSPSHSGTTHMMVENILQ
EEEEECCEEEEEECHHHHHCCCCCCCCHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHH
SEGWDAGWGLLMRIGGNLASLSARSFGVSDAISRGLVGAGPVIDNYASVARSHFDYVGFT
HCCCCHHHHHHHHHCCCHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEE
YLPDTVILPTYCGLTAKAEHAAKAREFLSFLLSPEGQAILTEPEFAKTPLSDGKLANSTA
ECCCCEEHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHCCCCCCCCCCCCEE
FVIEKQQLFIRNNVIKALFEQAIAQQLPKLRYTWLAIIKAQGAMKDTPKNHEVLTQAIAL
EEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
ASRVPISEAEAMSPDLQTVFADYEQQPSAQMERTMQDWRMQVAQQLEQAMALVRTLEYP
HHCCCCCHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQKKLLALLLMLWLGWPNTGQAKENCLVILTSFSELPFKGLVDKFSAKEQCEVRVIYRR
CHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCEEEEEHH
TLPAIRLLTDENQPRIDLVVSSSPTLFQTLHQQHLLAPLGELPAAPAWLKRHSLPASDYV
CCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCE
LPVAYSGIGLMFNRDYLNKHGLPQPRSWQDLAQPGFNGHVMMSSPSHSGTTHMMVENILQ
EEEEECCEEEEEECHHHHHCCCCCCCCHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHH
SEGWDAGWGLLMRIGGNLASLSARSFGVSDAISRGLVGAGPVIDNYASVARSHFDYVGFT
HCCCCHHHHHHHHHCCCHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEE
YLPDTVILPTYCGLTAKAEHAAKAREFLSFLLSPEGQAILTEPEFAKTPLSDGKLANSTA
ECCCCEEHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHCCCCCCCCCCCCEE
FVIEKQQLFIRNNVIKALFEQAIAQQLPKLRYTWLAIIKAQGAMKDTPKNHEVLTQAIAL
EEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
ASRVPISEAEAMSPDLQTVFADYEQQPSAQMERTMQDWRMQVAQQLEQAMALVRTLEYP
HHCCCCCHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]