Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776101

Identifier: 119776101

GI number: 119776101

Start: 3535165

End: 3535839

Strand: Reverse

Name: 119776101

Synonym: Sama_2969

Alternate gene names: NA

Gene position: 3535839-3535165 (Counterclockwise)

Preceding gene: 119776103

Following gene: 119776098

Centisome position: 82.11

GC content: 53.93

Gene sequence:

>675_bases
GTGACGGAACTGCATCATCCCCTGAATGACTTTATTGAATACCCACCCGAAGAAATGCGTCGCCGCGCAGAGGCCAATCT
TATCGAGCTTCGCCGACGTCACTCCATTCGCAAGTTTTCAGACAAGCCGGTGGCCAGAGAAATCATTGAGCAATGCATAT
TGGCAGCAGCTTCGGCGCCAAGCGGTGCCAATCATCAGCCCTGGCATTTTGTGGCAATTTCCAGTCCCGATGTGAAGGCA
GCAATTCGTTGTGAAGCGGAGGCGCTGGAGCAAAGTTTTTATCAGGGACGGGCAGGGGAAGAGTGGCTGGACGCTTTAAA
GCCCCTGGGCACCAACGCGAATAAGGCCTATTTGGAACGAGCCCCCTGGTTGATTGCCGTGTTCAGCCAAAAGCGCGGCG
GTGTGGATGAAGGCGATAATAAGACAAACTACTATGTGCATGAATCCGTTGGTATTGCTACCGGCTTTTTGATTCAGGCA
CTGCACCATGCGGGCCTTGGCACCCTGACCCATACCCCAAAACCCATGAGCTTTTTGAGCAAAATTTGCGGCCGTGACAA
CGATGTGGACCGGCCCTACATGCTGATTGTGGCCGGGTATCCCGACCAGGATGCCACTGTCCCCGACCATGCCCTGAAAA
AGAAATCCCTGGAGCAGGTGGCTTCGTTTCTCTAG

Upstream 100 bases:

>100_bases
ATAATTTTACCTACACCTGTTCGGTAAAGGTTTTGCTGTGACTGCTCATGCTTCCTGATAAGGTGGATGCCTGAAGAATA
TGGCAAAAGGAGTCTGACCC

Downstream 100 bases:

>100_bases
TTGGCTGTTTTTCAATAACTATTGGTGCAGCCGGTTGTTGTACTCTTGGTGCCGGCTTTGGCGGCCTTAACCCATGCAGA
CATGGGTTAAGGTGGGCGGG

Product: nitroreductase

Products: NA

Alternate protein names: Oxidoreductase; Nitroreductase Family Protein; NAD(P)H-Flavin Oxidoreductase; NADH Oxidase

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MTELHHPLNDFIEYPPEEMRRRAEANLIELRRRHSIRKFSDKPVAREIIEQCILAAASAPSGANHQPWHFVAISSPDVKA
AIRCEAEALEQSFYQGRAGEEWLDALKPLGTNANKAYLERAPWLIAVFSQKRGGVDEGDNKTNYYVHESVGIATGFLIQA
LHHAGLGTLTHTPKPMSFLSKICGRDNDVDRPYMLIVAGYPDQDATVPDHALKKKSLEQVASFL

Sequences:

>Translated_224_residues
MTELHHPLNDFIEYPPEEMRRRAEANLIELRRRHSIRKFSDKPVAREIIEQCILAAASAPSGANHQPWHFVAISSPDVKA
AIRCEAEALEQSFYQGRAGEEWLDALKPLGTNANKAYLERAPWLIAVFSQKRGGVDEGDNKTNYYVHESVGIATGFLIQA
LHHAGLGTLTHTPKPMSFLSKICGRDNDVDRPYMLIVAGYPDQDATVPDHALKKKSLEQVASFL
>Mature_223_residues
TELHHPLNDFIEYPPEEMRRRAEANLIELRRRHSIRKFSDKPVAREIIEQCILAAASAPSGANHQPWHFVAISSPDVKAA
IRCEAEALEQSFYQGRAGEEWLDALKPLGTNANKAYLERAPWLIAVFSQKRGGVDEGDNKTNYYVHESVGIATGFLIQAL
HHAGLGTLTHTPKPMSFLSKICGRDNDVDRPYMLIVAGYPDQDATVPDHALKKKSLEQVASFL

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI42794271, Length=208, Percent_Identity=42.3076923076923, Blast_Score=146, Evalue=2e-35,
Organism=Homo sapiens, GI257743489, Length=152, Percent_Identity=42.1052631578947, Blast_Score=114, Evalue=5e-26,
Organism=Homo sapiens, GI257743486, Length=158, Percent_Identity=41.1392405063291, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI71980980, Length=197, Percent_Identity=30.4568527918782, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI281366032, Length=206, Percent_Identity=37.8640776699029, Blast_Score=121, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24662475, Length=190, Percent_Identity=38.9473684210526, Blast_Score=120, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25056; Mature: 24924

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELHHPLNDFIEYPPEEMRRRAEANLIELRRRHSIRKFSDKPVAREIIEQCILAAASAP
CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
SGANHQPWHFVAISSPDVKAAIRCEAEALEQSFYQGRAGEEWLDALKPLGTNANKAYLER
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHH
APWLIAVFSQKRGGVDEGDNKTNYYVHESVGIATGFLIQALHHAGLGTLTHTPKPMSFLS
CCEEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
KICGRDNDVDRPYMLIVAGYPDQDATVPDHALKKKSLEQVASFL
HHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TELHHPLNDFIEYPPEEMRRRAEANLIELRRRHSIRKFSDKPVAREIIEQCILAAASAP
CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
SGANHQPWHFVAISSPDVKAAIRCEAEALEQSFYQGRAGEEWLDALKPLGTNANKAYLER
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHH
APWLIAVFSQKRGGVDEGDNKTNYYVHESVGIATGFLIQALHHAGLGTLTHTPKPMSFLS
CCEEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
KICGRDNDVDRPYMLIVAGYPDQDATVPDHALKKKSLEQVASFL
HHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA