Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776038

Identifier: 119776038

GI number: 119776038

Start: 3454079

End: 3455068

Strand: Reverse

Name: 119776038

Synonym: Sama_2906

Alternate gene names: NA

Gene position: 3455068-3454079 (Counterclockwise)

Preceding gene: 119776039

Following gene: 119776037

Centisome position: 80.24

GC content: 53.84

Gene sequence:

>990_bases
ATGACCACCGCCAGACGCCAATTGATAGATGCTGAATCTACGCCTTTCTACCATGTGATAAATCGCTGTGTCCGACGGGC
GTTTTTGTGTGGCGAGGATGCGCTGTCGGGGCGCAGCTATGAGCACAGGCGTGACTGGATAGTGGATAAAATCAAGCAGT
TGTCCTCGGTGTTCTGTATCGATGTCTGCGCCTATGCGGTGATGTCCAACCACTATCATCTGGTGCTGAAAATTAATCTG
GCAACTCAAAAGCGCTTGTCACACTTTGAGGTCATTGAGCGGTGGACGCAGCTTTTCTTTGGTCATCCTGTCGCGGCTAA
GTTTCTCAAGGGTGACAGTCTCGAGGAAGGCGAGCGCCTTTTGCTGGATAGTCTGATTGGTGAGTGGCAGGAGCGGCTTG
GCAGTATCAGTTGGTTCATGCGCTGCCTCAACGAGGAGATTGCCCGCAAAGCCAATCGGGAAGATGGCTGCAAAGGTGTA
TTCTGGGAAGGGCGCTTTAAATCTCAGGCGCTGCTGGATGAGCAGGCACTGCTGGCCTGCATGATGTATGTGGACTTAAA
CCCCATTCGTGCCGGTATTGCCGACTCGCTGCAAGGCTCAGATTACACCTCGATTCAGGAGCGAATTGAAGAACTTGCAA
GTCCCCAGTCTGCTCCTGTTGCGCTCAAACCACTGCTGGCGTTTGATGGCGCCGCCATCGCTACCGAGCAATGCGGCATC
CCGTTCCACTTTGCCGATTACCTGGAGCTGATTGACTGGACCGGGCGCGCGGTGCGGGAAGACAAACGTGGTTTTATCGC
CACCACAAGGCCAAAGCTGCTTGCTGAACTTGGGATCAGTGATGATGCCTGGATAACCTCAGCCAAGGAATTTCGCCGCC
AATACAGTGGTATCAGCGGCCGCTGGGATGCCATGTGCGCCATGAAAGCCAAATGTGGCGGCAAATGGTGTAGAGGAAAG
CAGCAAAGCGCGTCGATACATCCAGACTAA

Upstream 100 bases:

>100_bases
CATCCGAAACAAACAAAACAGGACAGCCAGATCTTTTTGATGTTCGATAACCCCTCGACTAGGCTTTGATCTATCCCCTT
CTCGCCAGTCGAGGCTTACC

Downstream 100 bases:

>100_bases
TCAAGCCTGGTATATTCCACGTTTCCCCTGCTGGCTCGAACCAGAATTTGGCATGGCCGAAAGGCCCCATTTTGCCTCAA
ATGGATCTCTTGAAGCTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MTTARRQLIDAESTPFYHVINRCVRRAFLCGEDALSGRSYEHRRDWIVDKIKQLSSVFCIDVCAYAVMSNHYHLVLKINL
ATQKRLSHFEVIERWTQLFFGHPVAAKFLKGDSLEEGERLLLDSLIGEWQERLGSISWFMRCLNEEIARKANREDGCKGV
FWEGRFKSQALLDEQALLACMMYVDLNPIRAGIADSLQGSDYTSIQERIEELASPQSAPVALKPLLAFDGAAIATEQCGI
PFHFADYLELIDWTGRAVREDKRGFIATTRPKLLAELGISDDAWITSAKEFRRQYSGISGRWDAMCAMKAKCGGKWCRGK
QQSASIHPD

Sequences:

>Translated_329_residues
MTTARRQLIDAESTPFYHVINRCVRRAFLCGEDALSGRSYEHRRDWIVDKIKQLSSVFCIDVCAYAVMSNHYHLVLKINL
ATQKRLSHFEVIERWTQLFFGHPVAAKFLKGDSLEEGERLLLDSLIGEWQERLGSISWFMRCLNEEIARKANREDGCKGV
FWEGRFKSQALLDEQALLACMMYVDLNPIRAGIADSLQGSDYTSIQERIEELASPQSAPVALKPLLAFDGAAIATEQCGI
PFHFADYLELIDWTGRAVREDKRGFIATTRPKLLAELGISDDAWITSAKEFRRQYSGISGRWDAMCAMKAKCGGKWCRGK
QQSASIHPD
>Mature_328_residues
TTARRQLIDAESTPFYHVINRCVRRAFLCGEDALSGRSYEHRRDWIVDKIKQLSSVFCIDVCAYAVMSNHYHLVLKINLA
TQKRLSHFEVIERWTQLFFGHPVAAKFLKGDSLEEGERLLLDSLIGEWQERLGSISWFMRCLNEEIARKANREDGCKGVF
WEGRFKSQALLDEQALLACMMYVDLNPIRAGIADSLQGSDYTSIQERIEELASPQSAPVALKPLLAFDGAAIATEQCGIP
FHFADYLELIDWTGRAVREDKRGFIATTRPKLLAELGISDDAWITSAKEFRRQYSGISGRWDAMCAMKAKCGGKWCRGKQ
QSASIHPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37336; Mature: 37205

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTARRQLIDAESTPFYHVINRCVRRAFLCGEDALSGRSYEHRRDWIVDKIKQLSSVFCI
CCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH
DVCAYAVMSNHYHLVLKINLATQKRLSHFEVIERWTQLFFGHPVAAKFLKGDSLEEGERL
HHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHH
LLDSLIGEWQERLGSISWFMRCLNEEIARKANREDGCKGVFWEGRFKSQALLDEQALLAC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHH
MMYVDLNPIRAGIADSLQGSDYTSIQERIEELASPQSAPVALKPLLAFDGAAIATEQCGI
HHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHCCC
PFHFADYLELIDWTGRAVREDKRGFIATTRPKLLAELGISDDAWITSAKEFRRQYSGISG
CHHHHHHHHHHHHCCHHHHHHCCCCEEECCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
RWDAMCAMKAKCGGKWCRGKQQSASIHPD
CHHHHHHHHHHCCCHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TTARRQLIDAESTPFYHVINRCVRRAFLCGEDALSGRSYEHRRDWIVDKIKQLSSVFCI
CCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH
DVCAYAVMSNHYHLVLKINLATQKRLSHFEVIERWTQLFFGHPVAAKFLKGDSLEEGERL
HHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHH
LLDSLIGEWQERLGSISWFMRCLNEEIARKANREDGCKGVFWEGRFKSQALLDEQALLAC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHH
MMYVDLNPIRAGIADSLQGSDYTSIQERIEELASPQSAPVALKPLLAFDGAAIATEQCGI
HHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHCCC
PFHFADYLELIDWTGRAVREDKRGFIATTRPKLLAELGISDDAWITSAKEFRRQYSGISG
CHHHHHHHHHHHHCCHHHHHHCCCCEEECCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
RWDAMCAMKAKCGGKWCRGKQQSASIHPD
CHHHHHHHHHHCCCHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA