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The map label for this gene is 119776039

Identifier: 119776039

GI number: 119776039

Start: 3455692

End: 3456714

Strand: Reverse

Name: 119776039

Synonym: Sama_2907

Alternate gene names: NA

Gene position: 3456714-3455692 (Counterclockwise)

Preceding gene: 119776040

Following gene: 119776038

Centisome position: 80.27

GC content: 44.67

Gene sequence:

>1023_bases
TTGCTAATTCAGGCTAACCATATGAACGGCCGGGTGTACGATTATAACCTGGGCCGCTTCATGAGCGTGGATCCGCTGAT
CCAGAGTCCCACCTCGACCCAGAGTGTGAACCCCTATTCGTACATAATGAACAACCCGCTGGCGGGGACGGATCCGACTG
GGTATGCCTGTGAGGCAGCAACTGGTTCGCATATTTGTAAATCGGAAGTTAAGGCTACAGTGACAAAAGAAGGTACTACG
GCAAAAGTGCACTTAACTGGCGGAACAGCGAAACAGCAACGAGCCGTTGCCAATACCATTGTCAATGGCGCTAAAACTGC
ACAGGCAACCGGAAGTTCGCTGGCAAGTGGCATTCTCTCTGAAGTTGGTAGTATGCTGTGGAATACAAAGCAGACCATGG
GAAGCACAACTAATAGTAATAGCGATAATACTGCCGGAGAAGTAGCCACCGCAGCTGGTGCAGCCTCAGTATCGCTTTCT
GTGCTAGAGCATACTACAGATGGAAAAGCACTAGTGCCCCCAATAGGAGATTATGATTCAACCGGTCAATCACGGGTAAT
GGGAAAGCTTGAAAAAGTTAAACCTGGAAAAATCAATCAAATACCATTAAAAGAAATAACAAAATATGCTAGTCGATTAG
GTGGTGCGCTTGGTGCTGTGGCTGTTATGGCTTCCTATAAAGCTAATATAGCTGCTTTAGAAAAAGGAGATATTAGTGAC
TCAGAACTGAAAGGTAAGCTTTTTGCCGATGCAGTAGTTGCCCTAATTGCTTTTCGAGGGGGCAAGGGAGGGGCTATTGT
CGGTGGAGCTTATTTTGTAGCTGACTACGTTTTTTCAAAAGACGATGTGAATGGTTGGATCATGATTAAAAGAGAGAGCG
TAAGTGCAATGGAAAATACTCAATCATCTATATCCGATAGCACTCGTGAATTGAAAGCGATTAGGCGAGAGTATGAAAAT
AATCCTAAGAGTGTCATTTATAGTTCGTTAGGCATTGATAATATCAATTTTGGTGGTGAGTGA

Upstream 100 bases:

>100_bases
TTGTTTGATGATGGCAGCGTTGTTCAATCCGCAAACACCAACAGGCCTCGCTATCGGGGTAGATTCGTTTGAACAGGGTT
ACTTGAAAATGTGAATATGA

Downstream 100 bases:

>100_bases
AAAATGAGAATTCTACAAGATTTCTTAGTAGGCGGGTATGCTTACTATCGGAAGAAAAGGTTCAGTCACGATAGTGCCGT
GACTATGCTTACTTTGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Rhs Family Protein; Rhs Family Protein-Like; YD Repeat Protein; RHS Repeat Family; Integrins Alpha Chain; RHS Repeat-Associated Core Domain Protein; FG-GAP Repeat Protein

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MLIQANHMNGRVYDYNLGRFMSVDPLIQSPTSTQSVNPYSYIMNNPLAGTDPTGYACEAATGSHICKSEVKATVTKEGTT
AKVHLTGGTAKQQRAVANTIVNGAKTAQATGSSLASGILSEVGSMLWNTKQTMGSTTNSNSDNTAGEVATAAGAASVSLS
VLEHTTDGKALVPPIGDYDSTGQSRVMGKLEKVKPGKINQIPLKEITKYASRLGGALGAVAVMASYKANIAALEKGDISD
SELKGKLFADAVVALIAFRGGKGGAIVGGAYFVADYVFSKDDVNGWIMIKRESVSAMENTQSSISDSTRELKAIRREYEN
NPKSVIYSSLGIDNINFGGE

Sequences:

>Translated_340_residues
MLIQANHMNGRVYDYNLGRFMSVDPLIQSPTSTQSVNPYSYIMNNPLAGTDPTGYACEAATGSHICKSEVKATVTKEGTT
AKVHLTGGTAKQQRAVANTIVNGAKTAQATGSSLASGILSEVGSMLWNTKQTMGSTTNSNSDNTAGEVATAAGAASVSLS
VLEHTTDGKALVPPIGDYDSTGQSRVMGKLEKVKPGKINQIPLKEITKYASRLGGALGAVAVMASYKANIAALEKGDISD
SELKGKLFADAVVALIAFRGGKGGAIVGGAYFVADYVFSKDDVNGWIMIKRESVSAMENTQSSISDSTRELKAIRREYEN
NPKSVIYSSLGIDNINFGGE
>Mature_340_residues
MLIQANHMNGRVYDYNLGRFMSVDPLIQSPTSTQSVNPYSYIMNNPLAGTDPTGYACEAATGSHICKSEVKATVTKEGTT
AKVHLTGGTAKQQRAVANTIVNGAKTAQATGSSLASGILSEVGSMLWNTKQTMGSTTNSNSDNTAGEVATAAGAASVSLS
VLEHTTDGKALVPPIGDYDSTGQSRVMGKLEKVKPGKINQIPLKEITKYASRLGGALGAVAVMASYKANIAALEKGDISD
SELKGKLFADAVVALIAFRGGKGGAIVGGAYFVADYVFSKDDVNGWIMIKRESVSAMENTQSSISDSTRELKAIRREYEN
NPKSVIYSSLGIDNINFGGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35654; Mature: 35654

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIQANHMNGRVYDYNLGRFMSVDPLIQSPTSTQSVNPYSYIMNNPLAGTDPTGYACEAA
CEEEECCCCCEEEEECCCCEEECCHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCEECCC
TGSHICKSEVKATVTKEGTTAKVHLTGGTAKQQRAVANTIVNGAKTAQATGSSLASGILS
CCCHHHHHHHHEEEECCCCEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EVGSMLWNTKQTMGSTTNSNSDNTAGEVATAAGAASVSLSVLEHTTDGKALVPPIGDYDS
HHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHCCHHHEEEEEEEECCCCCEECCCCCCCCC
TGQSRVMGKLEKVKPGKINQIPLKEITKYASRLGGALGAVAVMASYKANIAALEKGDISD
CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEECCCCCH
SELKGKLFADAVVALIAFRGGKGGAIVGGAYFVADYVFSKDDVNGWIMIKRESVSAMENT
HHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHH
QSSISDSTRELKAIRREYENNPKSVIYSSLGIDNINFGGE
HHHHHHHHHHHHHHHHHHCCCCHHEEEHHCCCCCCCCCCC
>Mature Secondary Structure
MLIQANHMNGRVYDYNLGRFMSVDPLIQSPTSTQSVNPYSYIMNNPLAGTDPTGYACEAA
CEEEECCCCCEEEEECCCCEEECCHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCEECCC
TGSHICKSEVKATVTKEGTTAKVHLTGGTAKQQRAVANTIVNGAKTAQATGSSLASGILS
CCCHHHHHHHHEEEECCCCEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EVGSMLWNTKQTMGSTTNSNSDNTAGEVATAAGAASVSLSVLEHTTDGKALVPPIGDYDS
HHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHCCHHHEEEEEEEECCCCCEECCCCCCCCC
TGQSRVMGKLEKVKPGKINQIPLKEITKYASRLGGALGAVAVMASYKANIAALEKGDISD
CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEECCCCCH
SELKGKLFADAVVALIAFRGGKGGAIVGGAYFVADYVFSKDDVNGWIMIKRESVSAMENT
HHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHH
QSSISDSTRELKAIRREYENNPKSVIYSSLGIDNINFGGE
HHHHHHHHHHHHHHHHHHCCCCHHEEEHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA