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The map label for this gene is yjjB [C]

Identifier: 119775957

GI number: 119775957

Start: 3363979

End: 3364446

Strand: Reverse

Name: yjjB [C]

Synonym: Sama_2825

Alternate gene names: 119775957

Gene position: 3364446-3363979 (Counterclockwise)

Preceding gene: 119775958

Following gene: 119775956

Centisome position: 78.13

GC content: 55.77

Gene sequence:

>468_bases
GTGAATTTAGCCCTTACTTTACTCAACGACGCGTTCTTTTCGGCCATCCCTGCCGTGGGCTTTGCCATGGTATTTAACGT
GCCAAAGCGTTTTCTACCTTACTGCGCCCTTGCTGGCGCACTGGGACACAGTTTCCGTACCCTAATCCTGCATTTCGGAT
TACCCATTGAGTGGGCAACCTTCGCTGCAGCGGCCCTGGTGGGGACTGTAACCATAGGCTTTGCCAAACGTCATCTGGCG
CCCCCCTTGCTTTACGCGGTGGCCGCCACTATCCCCATGATCCCGGGAACCTATGCCTTTAATACTGTGATTGCCCTGGT
GCAGCTGACGGCGCAATCTCAGGTCAGCCCAGAGCTGACCGGTGCCGTGATAAGCAATGGCCTGAAAACCGTCTTTATCC
TCGGTGCCTTGTCGGTGGGCCTGGCGCTGCCGAGTCTGCTGTATTTTCGTACCCGCCCCATCATATAA

Upstream 100 bases:

>100_bases
ATATGAACGTGGGTATTTCACGCTGGGGACATGCCACCTTGCTGACGGTTGCCTCGGTGATAGGTATCACCATAGCCATG
CAGTTGGGGGGCAAGTTTCT

Downstream 100 bases:

>100_bases
ACACAACTCAAAGAGGGAGCTTTTATGCGTATCGCCATGATTGCCGCGATGGCCAATAACCGGGTGATAGGAAAAGATAA
CCAAATGCCCTGGCATTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MNLALTLLNDAFFSAIPAVGFAMVFNVPKRFLPYCALAGALGHSFRTLILHFGLPIEWATFAAAALVGTVTIGFAKRHLA
PPLLYAVAATIPMIPGTYAFNTVIALVQLTAQSQVSPELTGAVISNGLKTVFILGALSVGLALPSLLYFRTRPII

Sequences:

>Translated_155_residues
MNLALTLLNDAFFSAIPAVGFAMVFNVPKRFLPYCALAGALGHSFRTLILHFGLPIEWATFAAAALVGTVTIGFAKRHLA
PPLLYAVAATIPMIPGTYAFNTVIALVQLTAQSQVSPELTGAVISNGLKTVFILGALSVGLALPSLLYFRTRPII
>Mature_155_residues
MNLALTLLNDAFFSAIPAVGFAMVFNVPKRFLPYCALAGALGHSFRTLILHFGLPIEWATFAAAALVGTVTIGFAKRHLA
PPLLYAVAATIPMIPGTYAFNTVIALVQLTAQSQVSPELTGAVISNGLKTVFILGALSVGLALPSLLYFRTRPII

Specific function: Unknown

COG id: COG3610

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0442 family [H]

Homologues:

Organism=Escherichia coli, GI145693219, Length=149, Percent_Identity=46.9798657718121, Blast_Score=132, Evalue=9e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010619
- InterPro:   IPR020914 [H]

Pfam domain/function: PF06738 DUF1212 [H]

EC number: NA

Molecular weight: Translated: 16400; Mature: 16400

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLALTLLNDAFFSAIPAVGFAMVFNVPKRFLPYCALAGALGHSFRTLILHFGLPIEWAT
CCEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
FAAAALVGTVTIGFAKRHLAPPLLYAVAATIPMIPGTYAFNTVIALVQLTAQSQVSPELT
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHH
GAVISNGLKTVFILGALSVGLALPSLLYFRTRPII
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNLALTLLNDAFFSAIPAVGFAMVFNVPKRFLPYCALAGALGHSFRTLILHFGLPIEWAT
CCEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
FAAAALVGTVTIGFAKRHLAPPLLYAVAATIPMIPGTYAFNTVIALVQLTAQSQVSPELT
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHH
GAVISNGLKTVFILGALSVGLALPSLLYFRTRPII
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA