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The map label for this gene is yjjP [H]

Identifier: 119775958

GI number: 119775958

Start: 3364443

End: 3365204

Strand: Reverse

Name: yjjP [H]

Synonym: Sama_2826

Alternate gene names: 119775958

Gene position: 3365204-3364443 (Counterclockwise)

Preceding gene: 119775959

Following gene: 119775957

Centisome position: 78.15

GC content: 55.77

Gene sequence:

>762_bases
GTGTACGCAGATACCCAGAATGACATAACCCGGCAGGTGGTGCGCGTCGCGCAGCTCCTGCTGGCCTATGGCGCCGAGTC
TGATTTGGTCGAAGAAATCAGTCAGCGCCTGGGCAGGGCCCTTGGACTGGCCAGTGTCGAATTGTCCATCTCTTCAAATT
CCCTCGTACTGACCAGTTTGGTACATGGCCGTTGTATCACCACCACCCGTCGTATTCGCGAGCATGGCATCAATATGCGG
ATTGTGTGCGAGCTACAACGGATTTGCCTGCTTGCTGAGAAAGGCCTCTATGGCCCCAACGAAGTCAGAAAGCGGGTGGC
CCGCATCACCCCCAAGAGTTACCCAGCCGCGCTGGTGATCCCCATGATTGGCCTTTCCTGTGCCAGTTTTTGCCATCTGT
TTGGCGGCGATTGGATGTCATCCATCATCACCTTTATCGCGGCGGCCATCGGTATGAGTGTGCGGCTGTCGTTAGCGCGC
AGGCACTTCAACCCTCTGGTGATTTTTTCGCTGACCGCCTTTGTCACCACGGCGGTGGCACAGCTCAGTTACGAGTGTCC
ACTGACCAAAACATCTGAACTTGCCATGGCGGCCAGTGTGCTGATGTTGGTGCCGGGGTTTCCGATGATCAATGCCATCT
CAGACATGGTGAAAGGGCATATGAACGTGGGTATTTCACGCTGGGGACATGCCACCTTGCTGACGGTTGCCTCGGTGATA
GGTATCACCATAGCCATGCAGTTGGGGGGCAAGTTTCTGTGA

Upstream 100 bases:

>100_bases
ACCCGGATTTTGATGATTCGGATGATGACGATGATTTCGATGATGACGACTACGACGTGGAAGTCATTTACCAGAGATAA
GCCTTCAATCGGGGATAGCG

Downstream 100 bases:

>100_bases
ATTTAGCCCTTACTTTACTCAACGACGCGTTCTTTTCGGCCATCCCTGCCGTGGGCTTTGCCATGGTATTTAACGTGCCA
AAGCGTTTTCTACCTTACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MYADTQNDITRQVVRVAQLLLAYGAESDLVEEISQRLGRALGLASVELSISSNSLVLTSLVHGRCITTTRRIREHGINMR
IVCELQRICLLAEKGLYGPNEVRKRVARITPKSYPAALVIPMIGLSCASFCHLFGGDWMSSIITFIAAAIGMSVRLSLAR
RHFNPLVIFSLTAFVTTAVAQLSYECPLTKTSELAMAASVLMLVPGFPMINAISDMVKGHMNVGISRWGHATLLTVASVI
GITIAMQLGGKFL

Sequences:

>Translated_253_residues
MYADTQNDITRQVVRVAQLLLAYGAESDLVEEISQRLGRALGLASVELSISSNSLVLTSLVHGRCITTTRRIREHGINMR
IVCELQRICLLAEKGLYGPNEVRKRVARITPKSYPAALVIPMIGLSCASFCHLFGGDWMSSIITFIAAAIGMSVRLSLAR
RHFNPLVIFSLTAFVTTAVAQLSYECPLTKTSELAMAASVLMLVPGFPMINAISDMVKGHMNVGISRWGHATLLTVASVI
GITIAMQLGGKFL
>Mature_253_residues
MYADTQNDITRQVVRVAQLLLAYGAESDLVEEISQRLGRALGLASVELSISSNSLVLTSLVHGRCITTTRRIREHGINMR
IVCELQRICLLAEKGLYGPNEVRKRVARITPKSYPAALVIPMIGLSCASFCHLFGGDWMSSIITFIAAAIGMSVRLSLAR
RHFNPLVIFSLTAFVTTAVAQLSYECPLTKTSELAMAASVLMLVPGFPMINAISDMVKGHMNVGISRWGHATLLTVASVI
GITIAMQLGGKFL

Specific function: Unknown

COG id: COG2966

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0108 [H]

Homologues:

Organism=Escherichia coli, GI87082435, Length=251, Percent_Identity=48.605577689243, Blast_Score=246, Evalue=1e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010619 [H]

Pfam domain/function: PF06738 DUF1212 [H]

EC number: NA

Molecular weight: Translated: 27449; Mature: 27449

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYADTQNDITRQVVRVAQLLLAYGAESDLVEEISQRLGRALGLASVELSISSNSLVLTSL
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHEEEEEECCCCCHHHHH
VHGRCITTTRRIREHGINMRIVCELQRICLLAEKGLYGPNEVRKRVARITPKSYPAALVI
HCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHH
PMIGLSCASFCHLFGGDWMSSIITFIAAAIGMSVRLSLARRHFNPLVIFSLTAFVTTAVA
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QLSYECPLTKTSELAMAASVLMLVPGFPMINAISDMVKGHMNVGISRWGHATLLTVASVI
HHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHH
GITIAMQLGGKFL
HHHHHHHHCCCCC
>Mature Secondary Structure
MYADTQNDITRQVVRVAQLLLAYGAESDLVEEISQRLGRALGLASVELSISSNSLVLTSL
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHEEEEEECCCCCHHHHH
VHGRCITTTRRIREHGINMRIVCELQRICLLAEKGLYGPNEVRKRVARITPKSYPAALVI
HCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHH
PMIGLSCASFCHLFGGDWMSSIITFIAAAIGMSVRLSLARRHFNPLVIFSLTAFVTTAVA
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QLSYECPLTKTSELAMAASVLMLVPGFPMINAISDMVKGHMNVGISRWGHATLLTVASVI
HHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHH
GITIAMQLGGKFL
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]