Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775791

Identifier: 119775791

GI number: 119775791

Start: 3182901

End: 3183461

Strand: Reverse

Name: 119775791

Synonym: Sama_2659

Alternate gene names: NA

Gene position: 3183461-3182901 (Counterclockwise)

Preceding gene: 119775793

Following gene: 119775785

Centisome position: 73.93

GC content: 54.9

Gene sequence:

>561_bases
ATGACAAGTACAAGACCCCCTGTGGGCCTGGGGGATGAACGCTATCAATTGGGGGTGTGTATCGCCAATCGCCCACCCTT
TATGGGGCTTGGCGAGCTCGCCAGCTGCCGCGCGTTGGTGAGCGGCGAAATCAAAGCCATAGGTGATGCCTGCGGTAATG
GCTGGCGCAAGGTATTTAACGTATATGCCAAGTTAATCTGGGCCATGGCGGCCGATGAGGTGATTAAAAAGGCGCTGCCG
GCGGTAGCGGCCGTGAGTCAATTTGACAGTTGGCAGGCATATCGTGATGCACTTCTGCTGCAACCTGACTGTGGCACGGC
GCTGCTGTTTTCATCGCCACTTGAGGCGCGCCCAGGCCCGCTGTATCTGGTGATGGGTAAAGGTTACGGCACTGCCTTCA
GTGATGTTGAAAGCGGGGGATTGCAACTGGAGTGGCTCAGCGAGCGATTTGCCATCGACCGTCATCGTCGCCTAATTGTC
TGTCCTTATTTCGATTATCGCCAATTAAGTAATCAGCGTATCGATGAACTGGTGGTGTTGACCCGCAGTCTGTGTGAGTA
A

Upstream 100 bases:

>100_bases
CTGTTGCCGCCCTGTCGCAGTCCTTGGCGTTCAGGTGTGGATAACCTATGCTGGGCCCCTCTCGCCTGCCTGAACCGACA
AATTGGATAAGGGAATCAAG

Downstream 100 bases:

>100_bases
TGCGTATGGCTGCGCTAAATATTGAAGCTTATATGTGTCAATATTGCTGCTCAGTTTGATAGCGTTACTGAACGGGCTGC
AACGCAGTGAAGGGAGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Parallel Beta-Helix Repeat-Containing Protein

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MTSTRPPVGLGDERYQLGVCIANRPPFMGLGELASCRALVSGEIKAIGDACGNGWRKVFNVYAKLIWAMAADEVIKKALP
AVAAVSQFDSWQAYRDALLLQPDCGTALLFSSPLEARPGPLYLVMGKGYGTAFSDVESGGLQLEWLSERFAIDRHRRLIV
CPYFDYRQLSNQRIDELVVLTRSLCE

Sequences:

>Translated_186_residues
MTSTRPPVGLGDERYQLGVCIANRPPFMGLGELASCRALVSGEIKAIGDACGNGWRKVFNVYAKLIWAMAADEVIKKALP
AVAAVSQFDSWQAYRDALLLQPDCGTALLFSSPLEARPGPLYLVMGKGYGTAFSDVESGGLQLEWLSERFAIDRHRRLIV
CPYFDYRQLSNQRIDELVVLTRSLCE
>Mature_185_residues
TSTRPPVGLGDERYQLGVCIANRPPFMGLGELASCRALVSGEIKAIGDACGNGWRKVFNVYAKLIWAMAADEVIKKALPA
VAAVSQFDSWQAYRDALLLQPDCGTALLFSSPLEARPGPLYLVMGKGYGTAFSDVESGGLQLEWLSERFAIDRHRRLIVC
PYFDYRQLSNQRIDELVVLTRSLCE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20549; Mature: 20418

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTRPPVGLGDERYQLGVCIANRPPFMGLGELASCRALVSGEIKAIGDACGNGWRKVFN
CCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHCHHHHHHHH
VYAKLIWAMAADEVIKKALPAVAAVSQFDSWQAYRDALLLQPDCGTALLFSSPLEARPGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCCCCC
LYLVMGKGYGTAFSDVESGGLQLEWLSERFAIDRHRRLIVCPYFDYRQLSNQRIDELVVL
EEEEEECCCCCCHHHHCCCCEEEEEHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHH
TRSLCE
HHHHCC
>Mature Secondary Structure 
TSTRPPVGLGDERYQLGVCIANRPPFMGLGELASCRALVSGEIKAIGDACGNGWRKVFN
CCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHCHHHHHHHH
VYAKLIWAMAADEVIKKALPAVAAVSQFDSWQAYRDALLLQPDCGTALLFSSPLEARPGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCCCCC
LYLVMGKGYGTAFSDVESGGLQLEWLSERFAIDRHRRLIVCPYFDYRQLSNQRIDELVVL
EEEEEECCCCCCHHHHCCCCEEEEEHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHH
TRSLCE
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA