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The map label for this gene is atoS [H]

Identifier: 119774685

GI number: 119774685

Start: 1884325

End: 1885854

Strand: Direct

Name: atoS [H]

Synonym: Sama_1548

Alternate gene names: 119774685

Gene position: 1884325-1885854 (Clockwise)

Preceding gene: 119774682

Following gene: 119774686

Centisome position: 43.76

GC content: 54.97

Gene sequence:

>1530_bases
ATGTCGATTCGACATTATTTATTTCTACTGTTTGGTGGCCTGATATTGCTGCTTGGACTGAGCCAGCTACTGATTGGTGA
GGCCCTGAAACGGCAACTGGAGTCTGACTTGAGTGAGGACTCGGTGGCGCTGTCCCGTCAGTTGGTGGACATAGTCGTTG
AGGATCTGGATGAAAACCTGCGATTTGTTACCAAAGCGCCTGAAGTGGCCGCGATTCCGGAAGAGGCTGAGCTTGCACTG
ACCATTGAGGACATTCGCCGACACGTGCCTTCTGAGGCGCAGCTCATTGAAATGCACCAGCATGAGCTCGAACGGGCCAT
GGCCGAGGTTGAGGCCATGATGGCAGAGCAGGAAAAAAATGAGGTGGCCGAGCAGCATCGCCAGCAAATACTGGCATCAT
TGAGTCGCGAGCTTGAGAAACTGGCCCGCACCCGTGAAAGCCTCGCCAAGGAATATCAGCAGGCACTGCACAAGTCTCTG
AGCACCATAGAAATTCGCCCGGCAGTGCAAAATAGTGGCAAGGTCACCATCATACGTCAGCTGGACGGCGGCCGGGTAGA
GCGCAAAAATATCGAGTTCAATCAAAGTAATGTGTCCGAGGCGCTGACACGTTTCCGGGAATGGATGTTTGCCCTTATCC
TCACCAGCAGTTTCTTTGGGCTGGTGTTTGTGTATTGGCTGAGTCGTCGTGTCAGCGGCCCACTGAGCGAGCTCGCTGCG
GGTCATCGTAAATTGGGCGAGGGACAGCTCGGTTACCGGGTGACCCCAAGGGGGGTGGATGAAATCAAAACCATGCTCGA
AGGCTTTAATGCCATGAGTGAAAAACTGGCGCAGCTCAGTGCCCGTGAACAGCAAATGGCCAGTCAGCAGCACCTGGTGG
AGCTTGGCGAAATCACCCGCGGTATCGCCCACAGTCTGCGTAATCCGCTGCATACCCTGGGGCTGCTTGCCGAAAACCAG
AGTCACACTGACGATGCGGCGGCAAGAGCCGTGCAGCTTGGGCAAATACAGCAAAAAATTGCGATGATGGACAAGCACAT
ACAATCCTTGCTGACCCTGTCATCCAACGAAGTGGACCGCAGCCGTCCCATTCCGGTCAATGCAGTGGTGCAGGACATCC
TGCTGGAACTCTCGGTGGCAGGACTCAAGCCGCAACTCCATTTAACCGGGTTTGACCTGGAACACTGGTTGCCTGGTATG
GAGTCGGAAATCCGCAGTATCCTGCATGCGGTTATCATTAATGCAGTAGAAGCCCAGGCTGACAGCGATACACCTTGGCT
TGGCATTGATATGAAAGCAGCGCAGGGGGAGTTGCTCGTCACAGTAACAGACAAGGGTGTCGGTATGGATGAGCGCTTGA
TTGAACGGCTCGGCCAGCCCCATGTCACCACCAAACCCGAGGGCACGGGAATGGGGCTTTACATTGCCAGTAGGCTCTTG
GCGAGCCATTATGGCGGCAGCCTGCACTTTGTGCGCCTCGATGAAGGCGGCAGCCGGGTTGTGGTGCATTTTAAACAGCA
GGAGGCTTGA

Upstream 100 bases:

>100_bases
AGCTGGCATCGAATTTGAATTGTTGAATTGGTTGTGCTTGATAAATCCGATACCCGTTTTCAACTCGTTATAGGGGGCGT
ATTTGCCCGGGGGTTAGTCA

Downstream 100 bases:

>100_bases
TGGCGCTCAGTATTTTGGTGGTAGAGGATGAGCCCGGCCAGCGTGAGCTCATCGTGGGTATGCTCAAGACCGAAGGCTAT
CGACTGCGTGAGGCTGATTG

Product: ATP-binding region, ATPase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 508

Protein sequence:

>509_residues
MSIRHYLFLLFGGLILLLGLSQLLIGEALKRQLESDLSEDSVALSRQLVDIVVEDLDENLRFVTKAPEVAAIPEEAELAL
TIEDIRRHVPSEAQLIEMHQHELERAMAEVEAMMAEQEKNEVAEQHRQQILASLSRELEKLARTRESLAKEYQQALHKSL
STIEIRPAVQNSGKVTIIRQLDGGRVERKNIEFNQSNVSEALTRFREWMFALILTSSFFGLVFVYWLSRRVSGPLSELAA
GHRKLGEGQLGYRVTPRGVDEIKTMLEGFNAMSEKLAQLSAREQQMASQQHLVELGEITRGIAHSLRNPLHTLGLLAENQ
SHTDDAAARAVQLGQIQQKIAMMDKHIQSLLTLSSNEVDRSRPIPVNAVVQDILLELSVAGLKPQLHLTGFDLEHWLPGM
ESEIRSILHAVIINAVEAQADSDTPWLGIDMKAAQGELLVTVTDKGVGMDERLIERLGQPHVTTKPEGTGMGLYIASRLL
ASHYGGSLHFVRLDEGGSRVVVHFKQQEA

Sequences:

>Translated_509_residues
MSIRHYLFLLFGGLILLLGLSQLLIGEALKRQLESDLSEDSVALSRQLVDIVVEDLDENLRFVTKAPEVAAIPEEAELAL
TIEDIRRHVPSEAQLIEMHQHELERAMAEVEAMMAEQEKNEVAEQHRQQILASLSRELEKLARTRESLAKEYQQALHKSL
STIEIRPAVQNSGKVTIIRQLDGGRVERKNIEFNQSNVSEALTRFREWMFALILTSSFFGLVFVYWLSRRVSGPLSELAA
GHRKLGEGQLGYRVTPRGVDEIKTMLEGFNAMSEKLAQLSAREQQMASQQHLVELGEITRGIAHSLRNPLHTLGLLAENQ
SHTDDAAARAVQLGQIQQKIAMMDKHIQSLLTLSSNEVDRSRPIPVNAVVQDILLELSVAGLKPQLHLTGFDLEHWLPGM
ESEIRSILHAVIINAVEAQADSDTPWLGIDMKAAQGELLVTVTDKGVGMDERLIERLGQPHVTTKPEGTGMGLYIASRLL
ASHYGGSLHFVRLDEGGSRVVVHFKQQEA
>Mature_508_residues
SIRHYLFLLFGGLILLLGLSQLLIGEALKRQLESDLSEDSVALSRQLVDIVVEDLDENLRFVTKAPEVAAIPEEAELALT
IEDIRRHVPSEAQLIEMHQHELERAMAEVEAMMAEQEKNEVAEQHRQQILASLSRELEKLARTRESLAKEYQQALHKSLS
TIEIRPAVQNSGKVTIIRQLDGGRVERKNIEFNQSNVSEALTRFREWMFALILTSSFFGLVFVYWLSRRVSGPLSELAAG
HRKLGEGQLGYRVTPRGVDEIKTMLEGFNAMSEKLAQLSAREQQMASQQHLVELGEITRGIAHSLRNPLHTLGLLAENQS
HTDDAAARAVQLGQIQQKIAMMDKHIQSLLTLSSNEVDRSRPIPVNAVVQDILLELSVAGLKPQLHLTGFDLEHWLPGME
SEIRSILHAVIINAVEAQADSDTPWLGIDMKAAQGELLVTVTDKGVGMDERLIERLGQPHVTTKPEGTGMGLYIASRLLA
SHYGGSLHFVRLDEGGSRVVVHFKQQEA

Specific function: Member of the two-component regulatory system AtoS/AtoC; may activate AtoC by phosphorylation [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=221, Percent_Identity=27.6018099547511, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1790436, Length=220, Percent_Identity=25, Blast_Score=65, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 56772; Mature: 56641

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRHYLFLLFGGLILLLGLSQLLIGEALKRQLESDLSEDSVALSRQLVDIVVEDLDENL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCH
RFVTKAPEVAAIPEEAELALTIEDIRRHVPSEAQLIEMHQHELERAMAEVEAMMAEQEKN
HHHCCCCCCCCCCCCCHHEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVAEQHRQQILASLSRELEKLARTRESLAKEYQQALHKSLSTIEIRPAVQNSGKVTIIRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCEEEECCCCCCCCEEEEEE
LDGGRVERKNIEFNQSNVSEALTRFREWMFALILTSSFFGLVFVYWLSRRVSGPLSELAA
CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
GHRKLGEGQLGYRVTPRGVDEIKTMLEGFNAMSEKLAQLSAREQQMASQQHLVELGEITR
HHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIAHSLRNPLHTLGLLAENQSHTDDAAARAVQLGQIQQKIAMMDKHIQSLLTLSSNEVDR
HHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SRPIPVNAVVQDILLELSVAGLKPQLHLTGFDLEHWLPGMESEIRSILHAVIINAVEAQA
CCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHCC
DSDTPWLGIDMKAAQGELLVTVTDKGVGMDERLIERLGQPHVTTKPEGTGMGLYIASRLL
CCCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
ASHYGGSLHFVRLDEGGSRVVVHFKQQEA
HHHCCCCEEEEEECCCCCEEEEEECCCCC
>Mature Secondary Structure 
SIRHYLFLLFGGLILLLGLSQLLIGEALKRQLESDLSEDSVALSRQLVDIVVEDLDENL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCH
RFVTKAPEVAAIPEEAELALTIEDIRRHVPSEAQLIEMHQHELERAMAEVEAMMAEQEKN
HHHCCCCCCCCCCCCCHHEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVAEQHRQQILASLSRELEKLARTRESLAKEYQQALHKSLSTIEIRPAVQNSGKVTIIRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCEEEECCCCCCCCEEEEEE
LDGGRVERKNIEFNQSNVSEALTRFREWMFALILTSSFFGLVFVYWLSRRVSGPLSELAA
CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
GHRKLGEGQLGYRVTPRGVDEIKTMLEGFNAMSEKLAQLSAREQQMASQQHLVELGEITR
HHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIAHSLRNPLHTLGLLAENQSHTDDAAARAVQLGQIQQKIAMMDKHIQSLLTLSSNEVDR
HHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SRPIPVNAVVQDILLELSVAGLKPQLHLTGFDLEHWLPGMESEIRSILHAVIINAVEAQA
CCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHCC
DSDTPWLGIDMKAAQGELLVTVTDKGVGMDERLIERLGQPHVTTKPEGTGMGLYIASRLL
CCCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
ASHYGGSLHFVRLDEGGSRVVVHFKQQEA
HHHCCCCEEEEEECCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8346225; 9097040; 9278503 [H]