| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is phnE [H]
Identifier: 119774682
GI number: 119774682
Start: 1881075
End: 1882574
Strand: Direct
Name: phnE [H]
Synonym: Sama_1545
Alternate gene names: 119774682
Gene position: 1881075-1882574 (Clockwise)
Preceding gene: 119774681
Following gene: 119774685
Centisome position: 43.68
GC content: 53.33
Gene sequence:
>1500_bases ATGCTGAACCTGGCGTTTATCGGCCGTTGGCAGCGGTTGACCCTGGGGTTATGGTTACTGTGTTTTTGCGCCTTTTGGCT GGCAGATACCGAAGTGATTGCCCTTGAGCCCTGGAATGAACTGGGGCGTATGTTTGCAGGTTTTATAACGCCGGACTTTT TTGCCACCGAGCATTTAATTGATGCGCTATGGCAAACGGTGAGCTTTACGCTGCTTGGGATAAGTCTTGGTCTGGTTATC GGCGTGCCATTGTCGCTGGTGTACCATCAGCCACTTGTTGCCGCAGGTTGCGCTTTTATCCGCGCCATTCACGAGATTTT CTGGGCATTGCTGTTTTTGCAACTGTTTGGCTTATCGCCGGTTACGGGAGTGTTGGCATTGGCGCTGCCCTACGGCACCA CGTTTGCCCGGGTTTTTCACGATATTCTCTGTAGGGCGCCCAAAGACACTGCCGATTCCTTGCCTGGTGGAACTGATCCC CTGAGCCAGTGGCTCTATGGCAAGATTGCCCATGTATTACCGGAGCTGCTTGCCTATACCCGTTATCGATTTGAATGCGC GTTAAGAAGCAGTGCGGTGCTCGGATTTGTGGGCATGCCAACCCTTGGCTTTCATTTGGAGAGTGCTTTTAAACAGGGGA ATTATTCGGAAGGCGCCGCGCTTTTGCTGTTGTTTATCTTCCTGATTGGGACCCTGCCTTACTGGTGCAAGCGTTGGCTG CTCCCGTTTTATATGCTGGCAGCGGTATATTTTCTGCCACCGGTCGCAGGGCTTGATGGCAGTCTTATATGGCGTTTTAT CAGCGAGGATATCTGGCCCCACGGTCTTAGACAGTGGCAACTCGGTGATTTGGGGTTAGGGGCAGCCCTGGTCGATACCC TGGGCTGGCTTCAAGGATTAATCCTGTCTCAGGCATTGCCGGGTATTATGGCAACGCTTGTACTTGCTTTGGGGGCGCTG GGGCTAACGCATTTGCTGGTGTGTTTTTTATTGCCCCTGGCTTATAAGCCCTTATCCGGCCGACTGGTGTCTGGCGCCAG CACGCTGTCGCTGCTGTTGATGCGTTCTATACCGGAATACATCCTGGCCTTTGTGTTTATGCTGCTGCTTGGCCCGTCGA TGTTGCCCGCGATGTTGGCTTTGGCGCTGCACAATGCGGGGCTGATTTTATTTTTGACCGCGAGAAGCGCCAACCGCATG CCGCCGCGCGACGAAGATAAGGGCGGGCTCGATGGTTTTGGTTATCGGGTATTGCCTGCCATTTATCCGGGGATGATGGC GCTGCTGTTTTATCGATTTGAAGTGATCCTGCGGGAAACGGCCATTCTCGGCATGTTGGGTGTGGCAACACTTGGTTTTT ATATTGACAGTAACTTTTCTGAAATTCGTTTTGCCGGAGCCATGGTGCTGATGGGAATAACAGCCATGGTGAATGTGTTG GTGGACGCCGCTGCCCGCCGGGCTCTGGGACAGGGGCGCCATAAAACTGAGCGATGCTGA
Upstream 100 bases:
>100_bases TGAAAAATGGCCAACTGGTGTTGGATGCACCTGCTTCGACGTTGACCCTGGCCGACCTTGATGCTTTTTATGGTGATGCG ATGAAGGATGAAGAGGCACA
Downstream 100 bases:
>100_bases GGCTGGTAAAGGGAAACTGAAACAGGATTAAGGGATTAGGGGAGGGGAATGACACGTCAGGAAAAATCGTCACTCCCGTT ACCGAATTGACACGTTAACC
Product: binding-protein-dependent transport systems inner membrane component
Products: 3-phospho-serine [Cytoplasm]; phosphite [Cytoplasm]; ADP; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MLNLAFIGRWQRLTLGLWLLCFCAFWLADTEVIALEPWNELGRMFAGFITPDFFATEHLIDALWQTVSFTLLGISLGLVI GVPLSLVYHQPLVAAGCAFIRAIHEIFWALLFLQLFGLSPVTGVLALALPYGTTFARVFHDILCRAPKDTADSLPGGTDP LSQWLYGKIAHVLPELLAYTRYRFECALRSSAVLGFVGMPTLGFHLESAFKQGNYSEGAALLLLFIFLIGTLPYWCKRWL LPFYMLAAVYFLPPVAGLDGSLIWRFISEDIWPHGLRQWQLGDLGLGAALVDTLGWLQGLILSQALPGIMATLVLALGAL GLTHLLVCFLLPLAYKPLSGRLVSGASTLSLLLMRSIPEYILAFVFMLLLGPSMLPAMLALALHNAGLILFLTARSANRM PPRDEDKGGLDGFGYRVLPAIYPGMMALLFYRFEVILRETAILGMLGVATLGFYIDSNFSEIRFAGAMVLMGITAMVNVL VDAAARRALGQGRHKTERC
Sequences:
>Translated_499_residues MLNLAFIGRWQRLTLGLWLLCFCAFWLADTEVIALEPWNELGRMFAGFITPDFFATEHLIDALWQTVSFTLLGISLGLVI GVPLSLVYHQPLVAAGCAFIRAIHEIFWALLFLQLFGLSPVTGVLALALPYGTTFARVFHDILCRAPKDTADSLPGGTDP LSQWLYGKIAHVLPELLAYTRYRFECALRSSAVLGFVGMPTLGFHLESAFKQGNYSEGAALLLLFIFLIGTLPYWCKRWL LPFYMLAAVYFLPPVAGLDGSLIWRFISEDIWPHGLRQWQLGDLGLGAALVDTLGWLQGLILSQALPGIMATLVLALGAL GLTHLLVCFLLPLAYKPLSGRLVSGASTLSLLLMRSIPEYILAFVFMLLLGPSMLPAMLALALHNAGLILFLTARSANRM PPRDEDKGGLDGFGYRVLPAIYPGMMALLFYRFEVILRETAILGMLGVATLGFYIDSNFSEIRFAGAMVLMGITAMVNVL VDAAARRALGQGRHKTERC >Mature_499_residues MLNLAFIGRWQRLTLGLWLLCFCAFWLADTEVIALEPWNELGRMFAGFITPDFFATEHLIDALWQTVSFTLLGISLGLVI GVPLSLVYHQPLVAAGCAFIRAIHEIFWALLFLQLFGLSPVTGVLALALPYGTTFARVFHDILCRAPKDTADSLPGGTDP LSQWLYGKIAHVLPELLAYTRYRFECALRSSAVLGFVGMPTLGFHLESAFKQGNYSEGAALLLLFIFLIGTLPYWCKRWL LPFYMLAAVYFLPPVAGLDGSLIWRFISEDIWPHGLRQWQLGDLGLGAALVDTLGWLQGLILSQALPGIMATLVLALGAL GLTHLLVCFLLPLAYKPLSGRLVSGASTLSLLLMRSIPEYILAFVFMLLLGPSMLPAMLALALHNAGLILFLTARSANRM PPRDEDKGGLDGFGYRVLPAIYPGMMALLFYRFEVILRETAILGMLGVATLGFYIDSNFSEIRFAGAMVLMGITAMVNVL VDAAARRALGQGRHKTERC
Specific function: Part of the ABC transporter complex phnCDE involved in phosphate import. Responsible for the translocation of the substrate across the membrane [H]
COG id: COG3639
COG function: function code P; ABC-type phosphate/phosphonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005769 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 54894; Mature: 54894
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNLAFIGRWQRLTLGLWLLCFCAFWLADTEVIALEPWNELGRMFAGFITPDFFATEHLI CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHH DALWQTVSFTLLGISLGLVIGVPLSLVYHQPLVAAGCAFIRAIHEIFWALLFLQLFGLSP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH VTGVLALALPYGTTFARVFHDILCRAPKDTADSLPGGTDPLSQWLYGKIAHVLPELLAYT HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH RYRFECALRSSAVLGFVGMPTLGFHLESAFKQGNYSEGAALLLLFIFLIGTLPYWCKRWL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHH LPFYMLAAVYFLPPVAGLDGSLIWRFISEDIWPHGLRQWQLGDLGLGAALVDTLGWLQGL HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ILSQALPGIMATLVLALGALGLTHLLVCFLLPLAYKPLSGRLVSGASTLSLLLMRSIPEY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHH ILAFVFMLLLGPSMLPAMLALALHNAGLILFLTARSANRMPPRDEDKGGLDGFGYRVLPA HHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH IYPGMMALLFYRFEVILRETAILGMLGVATLGFYIDSNFSEIRFAGAMVLMGITAMVNVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH VDAAARRALGQGRHKTERC HHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLNLAFIGRWQRLTLGLWLLCFCAFWLADTEVIALEPWNELGRMFAGFITPDFFATEHLI CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHH DALWQTVSFTLLGISLGLVIGVPLSLVYHQPLVAAGCAFIRAIHEIFWALLFLQLFGLSP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH VTGVLALALPYGTTFARVFHDILCRAPKDTADSLPGGTDPLSQWLYGKIAHVLPELLAYT HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH RYRFECALRSSAVLGFVGMPTLGFHLESAFKQGNYSEGAALLLLFIFLIGTLPYWCKRWL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHH LPFYMLAAVYFLPPVAGLDGSLIWRFISEDIWPHGLRQWQLGDLGLGAALVDTLGWLQGL HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ILSQALPGIMATLVLALGALGLTHLLVCFLLPLAYKPLSGRLVSGASTLSLLLMRSIPEY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHH ILAFVFMLLLGPSMLPAMLALALHNAGLILFLTARSANRMPPRDEDKGGLDGFGYRVLPA HHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH IYPGMMALLFYRFEVILRETAILGMLGVATLGFYIDSNFSEIRFAGAMVLMGITAMVNVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH VDAAARRALGQGRHKTERC HHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]
Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA