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The map label for this gene is phnC [H]

Identifier: 119774681

GI number: 119774681

Start: 1880404

End: 1881081

Strand: Direct

Name: phnC [H]

Synonym: Sama_1544

Alternate gene names: 119774681

Gene position: 1880404-1881081 (Clockwise)

Preceding gene: 119774680

Following gene: 119774682

Centisome position: 43.67

GC content: 55.01

Gene sequence:

>678_bases
ATGCTGGTTCTTGACCGGCTTTCGCTGGACTACGGCGGCCGGGAGGTCATTAAAGACCTCTCGGTCGTTTTACATTCCGG
GCAAAAGGTTGCCCTTATCGGTGCCTCCGGTGCTGGTAAATCCACTCTGCTTATGCACATGTATCGGCAGCTGAAAGACA
GGGCAACCCTGTGTGCCCAGTCCCAGGGATTGGTGGATAGCCTGAGCCTTTATCACAACATCTACATGGGTGCTCTGGCA
CGCCATAGTGGGCTGTATAACCTTGCCAATTTAGTGTGGCCGTTCAAGACACCTTTGGCTGAGGTGAGCGCACTTTGCCA
TGCCCTTGAATTGGATATACCGCCATCGACGCTGGTGAACCGCCTGTCGGGCGGGCAGCGCCAGCGGGTAGCCATTGGTC
GCGCCCTCTATCAGCGCCAGCCAATATTTTTGGGTGATGAGCCTGTATCGGCCCTCGACCCCGCCATGGCTGACAGGATC
ATCCGGCACATCCTCGGCAGTCACGACACTGTTGTGATGGTGCTGCACAATCGTCATCAGGCATTGACTCATTTTGACCG
CATTCTTGGGCTGAAAAATGGCCAACTGGTGTTGGATGCACCTGCTTCGACGTTGACCCTGGCCGACCTTGATGCTTTTT
ATGGTGATGCGATGAAGGATGAAGAGGCACAATGCTGA

Upstream 100 bases:

>100_bases
TTCTGGCCTCCTTCCCCCGCCAGTCATTCGTCCCAGCTGACAATGAAGACTTCCAGCCGGTGGAAGACGTCGCCAAAGCC
ATTGGCCTGATTGACTGATC

Downstream 100 bases:

>100_bases
ACCTGGCGTTTATCGGCCGTTGGCAGCGGTTGACCCTGGGGTTATGGTTACTGTGTTTTTGCGCCTTTTGGCTGGCAGAT
ACCGAAGTGATTGCCCTTGA

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MLVLDRLSLDYGGREVIKDLSVVLHSGQKVALIGASGAGKSTLLMHMYRQLKDRATLCAQSQGLVDSLSLYHNIYMGALA
RHSGLYNLANLVWPFKTPLAEVSALCHALELDIPPSTLVNRLSGGQRQRVAIGRALYQRQPIFLGDEPVSALDPAMADRI
IRHILGSHDTVVMVLHNRHQALTHFDRILGLKNGQLVLDAPASTLTLADLDAFYGDAMKDEEAQC

Sequences:

>Translated_225_residues
MLVLDRLSLDYGGREVIKDLSVVLHSGQKVALIGASGAGKSTLLMHMYRQLKDRATLCAQSQGLVDSLSLYHNIYMGALA
RHSGLYNLANLVWPFKTPLAEVSALCHALELDIPPSTLVNRLSGGQRQRVAIGRALYQRQPIFLGDEPVSALDPAMADRI
IRHILGSHDTVVMVLHNRHQALTHFDRILGLKNGQLVLDAPASTLTLADLDAFYGDAMKDEEAQC
>Mature_225_residues
MLVLDRLSLDYGGREVIKDLSVVLHSGQKVALIGASGAGKSTLLMHMYRQLKDRATLCAQSQGLVDSLSLYHNIYMGALA
RHSGLYNLANLVWPFKTPLAEVSALCHALELDIPPSTLVNRLSGGQRQRVAIGRALYQRQPIFLGDEPVSALDPAMADRI
IRHILGSHDTVVMVLHNRHQALTHFDRILGLKNGQLVLDAPASTLTLADLDAFYGDAMKDEEAQC

Specific function: Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system [H]

COG id: COG3638

COG function: function code P; ABC-type phosphate/phosphonate transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI4557481, Length=218, Percent_Identity=27.0642201834862, Blast_Score=72, Evalue=4e-13,
Organism=Escherichia coli, GI1790544, Length=259, Percent_Identity=28.1853281853282, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1789672, Length=223, Percent_Identity=30.4932735426009, Blast_Score=84, Evalue=5e-18,
Organism=Escherichia coli, GI1787089, Length=232, Percent_Identity=28.448275862069, Blast_Score=77, Evalue=7e-16,
Organism=Escherichia coli, GI1790467, Length=220, Percent_Identity=32.2727272727273, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787370, Length=214, Percent_Identity=30.8411214953271, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1788225, Length=223, Percent_Identity=29.1479820627803, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787105, Length=216, Percent_Identity=29.6296296296296, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1788761, Length=217, Percent_Identity=30.8755760368664, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87081709, Length=247, Percent_Identity=27.5303643724696, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI87082267, Length=207, Percent_Identity=28.9855072463768, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1788210, Length=213, Percent_Identity=28.6384976525822, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1788506, Length=215, Percent_Identity=27.4418604651163, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1786703, Length=214, Percent_Identity=28.9719626168224, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789593, Length=213, Percent_Identity=26.2910798122066, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1787143, Length=225, Percent_Identity=25.3333333333333, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI87081834, Length=213, Percent_Identity=28.6384976525822, Blast_Score=60, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI115534520, Length=219, Percent_Identity=27.8538812785388, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17558664, Length=207, Percent_Identity=30.4347826086957, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17569081, Length=196, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI45550390, Length=196, Percent_Identity=32.6530612244898, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI19920928, Length=203, Percent_Identity=31.0344827586207, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR012693
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: =3.6.3.28 [H]

Molecular weight: Translated: 24631; Mature: 24631

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLDRLSLDYGGREVIKDLSVVLHSGQKVALIGASGAGKSTLLMHMYRQLKDRATLCAQ
CEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
SQGLVDSLSLYHNIYMGALARHSGLYNLANLVWPFKTPLAEVSALCHALELDIPPSTLVN
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHH
RLSGGQRQRVAIGRALYQRQPIFLGDEPVSALDPAMADRIIRHILGSHDTVVMVLHNRHQ
HHCCCCHHHHHHHHHHHHCCCCEECCCCHHHCCHHHHHHHHHHHHCCCCEEEEEEECCHH
ALTHFDRILGLKNGQLVLDAPASTLTLADLDAFYGDAMKDEEAQC
HHHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLVLDRLSLDYGGREVIKDLSVVLHSGQKVALIGASGAGKSTLLMHMYRQLKDRATLCAQ
CEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
SQGLVDSLSLYHNIYMGALARHSGLYNLANLVWPFKTPLAEVSALCHALELDIPPSTLVN
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHH
RLSGGQRQRVAIGRALYQRQPIFLGDEPVSALDPAMADRIIRHILGSHDTVVMVLHNRHQ
HHCCCCHHHHHHHHHHHHCCCCEECCCCHHHCCHHHHHHHHHHHHCCCCEEEEEEECCHH
ALTHFDRILGLKNGQLVLDAPASTLTLADLDAFYGDAMKDEEAQC
HHHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]