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The map label for this gene is dadA [H]

Identifier: 119774670

GI number: 119774670

Start: 1863740

End: 1865026

Strand: Direct

Name: dadA [H]

Synonym: Sama_1533

Alternate gene names: 119774670

Gene position: 1863740-1865026 (Clockwise)

Preceding gene: 119774669

Following gene: 119774672

Centisome position: 43.28

GC content: 55.09

Gene sequence:

>1287_bases
GTGAAAACTAATCCAATGAAGATAAACGCTGGGACCCCCGATTCTGTCAACCAACAGGTGATAGTGATAGGTGCGGGTGT
GATTGGGCTTGCCAATGCCGTTACGCTCGCCAGAAGAGGCTTTAAAGTTACCGTAATAGACAAAGAGGGCGTCGCCGCCG
GTGCATCCTTCGGCAATGCCGGGCATTTTGCCACGGAGCAGGTATTCCCCCTGGCCGATCCGTCCTTGTTGCCAAAGTTA
CCCAAAATGTTGCTCGATCCACTTGGGCCTTTTCGCATTCGCCCGGCGTATTTCCATCGGGCGCTGCCTTGGTTTGTGCG
TTTTATCGTAAATATGATGCCCGCAAGGCGCCAACATAATGGTAATGCAATTAAGGCGCTTAATGCCCGGTCGATGGCGG
CCACCAAAGAACTGCTGACGTTTTGTGGCCGGGCGGATTTGCTGGTGGAAAATGGCTCCTTACTGGTATTTGAAACCCAA
GACCCGAGAGTTATGGAGCAGGAGCTGGCGCTCTACAACGACGCCGGGATTGCGGTCAGGTTACTAAGTGGTGATGAAGC
AAGGGCGCTGGAGCCTGACTTATCCGATGCTATCAGCGGAGCGCTGTGGTTTACAGAAGTTGGGCATACGCCCAATCCAA
GGGCTATTTGCGAAGCCTTGGCAGATACCCTGAAGGCCTTGGGGGGACGGATTGAAATAGATTCGGTCTGCTCATTACAA
GGTGGGAATACGCCCTCAGTAACCACTGAAACTGGTAAGGTCACAAAAGCCGATAAACTGCTTCTTTGCGCGGGCGCCTG
GTCACGGCCATTGGCGTTGAAGCTCGGTCACAGGGTGCCGCTGGAAACAGAGCGGGGTTATCACCTGATGATGCCCCAGC
ACAGTGGGCTGAAAAGGCCCGTTGCATCCTATGAGCGCAAGTTCATCATAACCCCCATGGAAGATGGTACACGTCTTGCT
GGAACCGTGGAATTTGGTGGGCTGAATGCTCCAATGTCCAATGCCCGTGCTGATTGCCTGCTGCCACACGCCAGGGTGCT
CTTACCCAAGGTGTTTGCGACAGCCAGGGTTTCAGAAGGTAAGCGCTGGATGGGATTCAGGCCATCACTGCCGGACAGTT
TGCCCGTCCTGGGCGAAAGCCAAACTCCGGGCGTCTACTTTGCTTTCGGGCATCAGCACCTCGGACTCACCTGGGCTGCG
AGCAGCGCCGAGCTGCTGGGGCAGTTGATATGTGGCGAGACTCCGTCCATCGATTTGAGCCCCTACTGTGTGAAGCGGTT
CGACTGA

Upstream 100 bases:

>100_bases
CGGGTGTCAGGCCGCGCCTTTATTACCGGAGAGCACACCTTTTTACTGCACCCGGACGATATTTTTCAAACCGGCTTTTT
ACTGCGTTGAGGGCTCAGGT

Downstream 100 bases:

>100_bases
GTTTGAGGCGGGCATTGGTAAAGCACGAAAAAAGGCGGCTAGTGGACCGCCTTTCTAATCCTTCTTTTACCCCGGCAGTA
TTTATCTATTGGCGGCCATG

Product: D-amino-acid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MKTNPMKINAGTPDSVNQQVIVIGAGVIGLANAVTLARRGFKVTVIDKEGVAAGASFGNAGHFATEQVFPLADPSLLPKL
PKMLLDPLGPFRIRPAYFHRALPWFVRFIVNMMPARRQHNGNAIKALNARSMAATKELLTFCGRADLLVENGSLLVFETQ
DPRVMEQELALYNDAGIAVRLLSGDEARALEPDLSDAISGALWFTEVGHTPNPRAICEALADTLKALGGRIEIDSVCSLQ
GGNTPSVTTETGKVTKADKLLLCAGAWSRPLALKLGHRVPLETERGYHLMMPQHSGLKRPVASYERKFIITPMEDGTRLA
GTVEFGGLNAPMSNARADCLLPHARVLLPKVFATARVSEGKRWMGFRPSLPDSLPVLGESQTPGVYFAFGHQHLGLTWAA
SSAELLGQLICGETPSIDLSPYCVKRFD

Sequences:

>Translated_428_residues
MKTNPMKINAGTPDSVNQQVIVIGAGVIGLANAVTLARRGFKVTVIDKEGVAAGASFGNAGHFATEQVFPLADPSLLPKL
PKMLLDPLGPFRIRPAYFHRALPWFVRFIVNMMPARRQHNGNAIKALNARSMAATKELLTFCGRADLLVENGSLLVFETQ
DPRVMEQELALYNDAGIAVRLLSGDEARALEPDLSDAISGALWFTEVGHTPNPRAICEALADTLKALGGRIEIDSVCSLQ
GGNTPSVTTETGKVTKADKLLLCAGAWSRPLALKLGHRVPLETERGYHLMMPQHSGLKRPVASYERKFIITPMEDGTRLA
GTVEFGGLNAPMSNARADCLLPHARVLLPKVFATARVSEGKRWMGFRPSLPDSLPVLGESQTPGVYFAFGHQHLGLTWAA
SSAELLGQLICGETPSIDLSPYCVKRFD
>Mature_428_residues
MKTNPMKINAGTPDSVNQQVIVIGAGVIGLANAVTLARRGFKVTVIDKEGVAAGASFGNAGHFATEQVFPLADPSLLPKL
PKMLLDPLGPFRIRPAYFHRALPWFVRFIVNMMPARRQHNGNAIKALNARSMAATKELLTFCGRADLLVENGSLLVFETQ
DPRVMEQELALYNDAGIAVRLLSGDEARALEPDLSDAISGALWFTEVGHTPNPRAICEALADTLKALGGRIEIDSVCSLQ
GGNTPSVTTETGKVTKADKLLLCAGAWSRPLALKLGHRVPLETERGYHLMMPQHSGLKRPVASYERKFIITPMEDGTRLA
GTVEFGGLNAPMSNARADCLLPHARVLLPKVFATARVSEGKRWMGFRPSLPDSLPVLGESQTPGVYFAFGHQHLGLTWAA
SSAELLGQLICGETPSIDLSPYCVKRFD

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=424, Percent_Identity=26.8867924528302, Blast_Score=126, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 46238; Mature: 46238

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNPMKINAGTPDSVNQQVIVIGAGVIGLANAVTLARRGFKVTVIDKEGVAAGASFGNA
CCCCCEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC
GHFATEQVFPLADPSLLPKLPKMLLDPLGPFRIRPAYFHRALPWFVRFIVNMMPARRQHN
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHCHHHCCC
GNAIKALNARSMAATKELLTFCGRADLLVENGSLLVFETQDPRVMEQELALYNDAGIAVR
CCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCHHHHHHHHHCCCCCEEEE
LLSGDEARALEPDLSDAISGALWFTEVGHTPNPRAICEALADTLKALGGRIEIDSVCSLQ
EECCCCCCCCCCCHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCEEEEC
GGNTPSVTTETGKVTKADKLLLCAGAWSRPLALKLGHRVPLETERGYHLMMPQHSGLKRP
CCCCCCEEECCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCC
VASYERKFIITPMEDGTRLAGTVEFGGLNAPMSNARADCLLPHARVLLPKVFATARVSEG
HHHHCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCC
KRWMGFRPSLPDSLPVLGESQTPGVYFAFGHQHLGLTWAASSAELLGQLICGETPSIDLS
CEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCHHHHHHHHHCCCCCCCCCC
PYCVKRFD
HHHHCCCC
>Mature Secondary Structure
MKTNPMKINAGTPDSVNQQVIVIGAGVIGLANAVTLARRGFKVTVIDKEGVAAGASFGNA
CCCCCEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC
GHFATEQVFPLADPSLLPKLPKMLLDPLGPFRIRPAYFHRALPWFVRFIVNMMPARRQHN
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHCHHHCCC
GNAIKALNARSMAATKELLTFCGRADLLVENGSLLVFETQDPRVMEQELALYNDAGIAVR
CCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCHHHHHHHHHCCCCCEEEE
LLSGDEARALEPDLSDAISGALWFTEVGHTPNPRAICEALADTLKALGGRIEIDSVCSLQ
EECCCCCCCCCCCHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCEEEEC
GGNTPSVTTETGKVTKADKLLLCAGAWSRPLALKLGHRVPLETERGYHLMMPQHSGLKRP
CCCCCCEEECCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCC
VASYERKFIITPMEDGTRLAGTVEFGGLNAPMSNARADCLLPHARVLLPKVFATARVSEG
HHHHCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCC
KRWMGFRPSLPDSLPVLGESQTPGVYFAFGHQHLGLTWAASSAELLGQLICGETPSIDLS
CEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCHHHHHHHHHCCCCCCCCCC
PYCVKRFD
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA