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The map label for this gene is 119774669

Identifier: 119774669

GI number: 119774669

Start: 1862689

End: 1863729

Strand: Direct

Name: 119774669

Synonym: Sama_1532

Alternate gene names: NA

Gene position: 1862689-1863729 (Clockwise)

Preceding gene: 119774663

Following gene: 119774670

Centisome position: 43.26

GC content: 54.27

Gene sequence:

>1041_bases
ATGGGACCCGTTCAGTTAAGCCCTGAATTACTTGGCCAATTTCGCCGGATAACCACCCTTGATGCCCACACGGAAGGAGA
ACCTCTGAGGATCATTACCTCGGGTTATCCCGCCATCCCCGGGAACACCATGTTGGACAAACGTAAGTTTTTAGCTGAGC
ACCTGGATGAGTATCGCCAGTTGTTGATGTTTGAACCGCGGGGCCATGCCGACATGTACGGCGTGCTCCTCACTGAACCG
GTGTCAAAAGGCGCCGATTTTGGCGTCCTGTTTTTGCACAACGAAGGTTATTCCAGCATGTGTGGCCATGCCGTATTGGC
GCTTGCCACGGTTTTGTGCCAAACCGGCGCCATCGACTTTGACGGCTGCAGTGCTGAAATAGGGATAGATGCGCCGGCAG
GTTTTATCCGGGCCTTTGCCGAAAAAGACACCACTGGTCGCATTCAGGCGAGTTTTTTAAACGTGCCATCCTGGGCCGAA
GCGCTGGATTTATCCATCGAAGTGCCGGGTATAGGTGAGGTGCCATTCGATATCGGCTTTGGTGGCGCTTATTATGCGTA
TGTGGATGCCGATGCTTTGGGGCTGGACTGCAGCGCAGACAATGTCAGTCAGTTGATTGACTGGGGCAGGCGAATCAAGC
AGGCGGTGATGGCATCGTATCCCATCAAGCATCCCCTTGATGAAGACCTGAGCTTTTTATATGGCACCATCTTTACCTCC
AGGCATACCGCAGTACCCGGGGCACATTCGCGCCATGTGTGTGTGTTTGCTGATGGCGAGGTTGACCGTTCCCCCACGGG
CACCGGCGTGGCAGGTCGTATCGCCTTGCTGCACGCCAGGGGAAAAGTGGAGCTGGCACAGGCACTCACCATTGAGAGCA
TTGTTGGCGGGAAAATGACTGTTGAAGCCAGGGAACGGGTGGATTTTCATGGCAGGGACGCACTTATTCCACGGGTGTCA
GGCCGCGCCTTTATTACCGGAGAGCACACCTTTTTACTGCACCCGGACGATATTTTTCAAACCGGCTTTTTACTGCGTTG
A

Upstream 100 bases:

>100_bases
TACAATAATGCAATCGAGAAAATCTCAGATTTCAGATTATTTGAATCTGTGTCGCTCGTCACTATATATTGCATACATTA
TTACAATAGGAAGTCGTCTG

Downstream 100 bases:

>100_bases
GGGCTCAGGTGTGAAAACTAATCCAATGAAGATAAACGCTGGGACCCCCGATTCTGTCAACCAACAGGTGATAGTGATAG
GTGCGGGTGTGATTGGGCTT

Product: putative proline racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MGPVQLSPELLGQFRRITTLDAHTEGEPLRIITSGYPAIPGNTMLDKRKFLAEHLDEYRQLLMFEPRGHADMYGVLLTEP
VSKGADFGVLFLHNEGYSSMCGHAVLALATVLCQTGAIDFDGCSAEIGIDAPAGFIRAFAEKDTTGRIQASFLNVPSWAE
ALDLSIEVPGIGEVPFDIGFGGAYYAYVDADALGLDCSADNVSQLIDWGRRIKQAVMASYPIKHPLDEDLSFLYGTIFTS
RHTAVPGAHSRHVCVFADGEVDRSPTGTGVAGRIALLHARGKVELAQALTIESIVGGKMTVEARERVDFHGRDALIPRVS
GRAFITGEHTFLLHPDDIFQTGFLLR

Sequences:

>Translated_346_residues
MGPVQLSPELLGQFRRITTLDAHTEGEPLRIITSGYPAIPGNTMLDKRKFLAEHLDEYRQLLMFEPRGHADMYGVLLTEP
VSKGADFGVLFLHNEGYSSMCGHAVLALATVLCQTGAIDFDGCSAEIGIDAPAGFIRAFAEKDTTGRIQASFLNVPSWAE
ALDLSIEVPGIGEVPFDIGFGGAYYAYVDADALGLDCSADNVSQLIDWGRRIKQAVMASYPIKHPLDEDLSFLYGTIFTS
RHTAVPGAHSRHVCVFADGEVDRSPTGTGVAGRIALLHARGKVELAQALTIESIVGGKMTVEARERVDFHGRDALIPRVS
GRAFITGEHTFLLHPDDIFQTGFLLR
>Mature_345_residues
GPVQLSPELLGQFRRITTLDAHTEGEPLRIITSGYPAIPGNTMLDKRKFLAEHLDEYRQLLMFEPRGHADMYGVLLTEPV
SKGADFGVLFLHNEGYSSMCGHAVLALATVLCQTGAIDFDGCSAEIGIDAPAGFIRAFAEKDTTGRIQASFLNVPSWAEA
LDLSIEVPGIGEVPFDIGFGGAYYAYVDADALGLDCSADNVSQLIDWGRRIKQAVMASYPIKHPLDEDLSFLYGTIFTSR
HTAVPGAHSRHVCVFADGEVDRSPTGTGVAGRIALLHARGKVELAQALTIESIVGGKMTVEARERVDFHGRDALIPRVSG
RAFITGEHTFLLHPDDIFQTGFLLR

Specific function: Unknown

COG id: COG3938

COG function: function code E; Proline racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline racemase family [H]

Homologues:

Organism=Homo sapiens, GI21389361, Length=335, Percent_Identity=44.1791044776119, Blast_Score=266, Evalue=3e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008794 [H]

Pfam domain/function: PF05544 Pro_racemase [H]

EC number: NA

Molecular weight: Translated: 37545; Mature: 37414

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPVQLSPELLGQFRRITTLDAHTEGEPLRIITSGYPAIPGNTMLDKRKFLAEHLDEYRQ
CCCCCCCHHHHHHHHHHEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
LLMFEPRGHADMYGVLLTEPVSKGADFGVLFLHNEGYSSMCGHAVLALATVLCQTGAIDF
HEEECCCCCCCEEEEEEECHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC
DGCSAEIGIDAPAGFIRAFAEKDTTGRIQASFLNVPSWAEALDLSIEVPGIGEVPFDIGF
CCCCEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHEEEEECCCCCCCCCCCCC
GGAYYAYVDADALGLDCSADNVSQLIDWGRRIKQAVMASYPIKHPLDEDLSFLYGTIFTS
CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
RHTAVPGAHSRHVCVFADGEVDRSPTGTGVAGRIALLHARGKVELAQALTIESIVGGKMT
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCCEEHHHHHHHHHHCCCEEE
VEARERVDFHGRDALIPRVSGRAFITGEHTFLLHPDDIFQTGFLLR
EEHHHHCCCCCCCEECEECCCCEEEEECEEEEECCHHHHHCCCCCC
>Mature Secondary Structure 
GPVQLSPELLGQFRRITTLDAHTEGEPLRIITSGYPAIPGNTMLDKRKFLAEHLDEYRQ
CCCCCCHHHHHHHHHHEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
LLMFEPRGHADMYGVLLTEPVSKGADFGVLFLHNEGYSSMCGHAVLALATVLCQTGAIDF
HEEECCCCCCCEEEEEEECHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC
DGCSAEIGIDAPAGFIRAFAEKDTTGRIQASFLNVPSWAEALDLSIEVPGIGEVPFDIGF
CCCCEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHEEEEECCCCCCCCCCCCC
GGAYYAYVDADALGLDCSADNVSQLIDWGRRIKQAVMASYPIKHPLDEDLSFLYGTIFTS
CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
RHTAVPGAHSRHVCVFADGEVDRSPTGTGVAGRIALLHARGKVELAQALTIESIVGGKMT
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCCEEHHHHHHHHHHCCCEEE
VEARERVDFHGRDALIPRVSGRAFITGEHTFLLHPDDIFQTGFLLR
EEHHHHCCCCCCCEECEECCCCEEEEECEEEEECCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]