Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774663

Identifier: 119774663

GI number: 119774663

Start: 1856248

End: 1856838

Strand: Direct

Name: 119774663

Synonym: Sama_1526

Alternate gene names: NA

Gene position: 1856248-1856838 (Clockwise)

Preceding gene: 119774662

Following gene: 119774669

Centisome position: 43.11

GC content: 55.16

Gene sequence:

>591_bases
ATGCCTTTACCCCTTCTCTGGATTGGTGGCGCCGCACTCGGTGCGCTGGCCATGGCTGATGCCCGGGAATCACGTCGACG
CTTGCAGTATCAACGTGCCCGTGGTCTGACGGCTGTCGACCATGGTGACAAATCTGTGGTGCTGTCGCCCAGCACCTGGC
AAACCGGTGGCAAGCAAAGCACGCCGCTGCCAGGCGCTTTGATGTGTTGTCATGTGTTTGGCGTGATTGAACATACAGGT
ATCTACCTTGGTGATGGTTTGATTGCAGAGCTGCACGGCAGCGGTCTTATCCGTGCTGTATCGGCAGAGCGATTTCTCCA
TGGGCGCACCGGCAGCCGCATTTTTGTCGCGGCTGACGCCAACCATCAGGCACTGGCGCACGAAATGGCCACGGAAAGAG
CCGCCATGTCACTGTTTCAGTATCGTGATTACGATCTGTTGGAAAACAACTGCCATCGATTTGTATGGCATTGCATCAGC
GGCGATGACAGAGAAATCAAGGGCTTTGGCGAGCTGAACCAATTGGTGGCATCTTTTTATGGCAAAGCCATCTATTGGGA
CGAGGCCAGGCTGTCTTATCCACGGGAATGA

Upstream 100 bases:

>100_bases
CACCCTCTGCGACTAGTCATATTCATTTACAGATTTTCATTCTGTTTTCAGGTGCTTTGGTTCTACTCTTCAGTGAATGT
CCATTCCTTTGGGAACGCTT

Downstream 100 bases:

>100_bases
GTTGTTCATGGTGGATATCACGAGGTGCTTGCCAGCTAACAGCCCCCAAGATGGGTTATAGGATGCCAGCTTTATCCGCA
GTGGGGGATTAGGCTCCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MPLPLLWIGGAALGALAMADARESRRRLQYQRARGLTAVDHGDKSVVLSPSTWQTGGKQSTPLPGALMCCHVFGVIEHTG
IYLGDGLIAELHGSGLIRAVSAERFLHGRTGSRIFVAADANHQALAHEMATERAAMSLFQYRDYDLLENNCHRFVWHCIS
GDDREIKGFGELNQLVASFYGKAIYWDEARLSYPRE

Sequences:

>Translated_196_residues
MPLPLLWIGGAALGALAMADARESRRRLQYQRARGLTAVDHGDKSVVLSPSTWQTGGKQSTPLPGALMCCHVFGVIEHTG
IYLGDGLIAELHGSGLIRAVSAERFLHGRTGSRIFVAADANHQALAHEMATERAAMSLFQYRDYDLLENNCHRFVWHCIS
GDDREIKGFGELNQLVASFYGKAIYWDEARLSYPRE
>Mature_195_residues
PLPLLWIGGAALGALAMADARESRRRLQYQRARGLTAVDHGDKSVVLSPSTWQTGGKQSTPLPGALMCCHVFGVIEHTGI
YLGDGLIAELHGSGLIRAVSAERFLHGRTGSRIFVAADANHQALAHEMATERAAMSLFQYRDYDLLENNCHRFVWHCISG
DDREIKGFGELNQLVASFYGKAIYWDEARLSYPRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21686; Mature: 21555

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPLLWIGGAALGALAMADARESRRRLQYQRARGLTAVDHGDKSVVLSPSTWQTGGKQS
CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCC
TPLPGALMCCHVFGVIEHTGIYLGDGLIAELHGSGLIRAVSAERFLHGRTGSRIFVAADA
CCCCHHHHHHHHHHHHHHCCEEECCCEEEEECCCCEEEHHHHHHHHCCCCCCEEEEEECC
NHQALAHEMATERAAMSLFQYRDYDLLENNCHRFVWHCISGDDREIKGFGELNQLVASFY
CHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHEEEEEECCCCCCCCCCHHHHHHHHHHHC
GKAIYWDEARLSYPRE
CCEEEECCCCCCCCCC
>Mature Secondary Structure 
PLPLLWIGGAALGALAMADARESRRRLQYQRARGLTAVDHGDKSVVLSPSTWQTGGKQS
CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCC
TPLPGALMCCHVFGVIEHTGIYLGDGLIAELHGSGLIRAVSAERFLHGRTGSRIFVAADA
CCCCHHHHHHHHHHHHHHCCEEECCCEEEEECCCCEEEHHHHHHHHCCCCCCEEEEEECC
NHQALAHEMATERAAMSLFQYRDYDLLENNCHRFVWHCISGDDREIKGFGELNQLVASFY
CHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHEEEEEECCCCCCCCCCHHHHHHHHHHHC
GKAIYWDEARLSYPRE
CCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA