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The map label for this gene is 119774662

Identifier: 119774662

GI number: 119774662

Start: 1855477

End: 1856163

Strand: Direct

Name: 119774662

Synonym: Sama_1525

Alternate gene names: NA

Gene position: 1855477-1856163 (Clockwise)

Preceding gene: 119774661

Following gene: 119774663

Centisome position: 43.09

GC content: 59.24

Gene sequence:

>687_bases
ATGGTTTCCCGGGCTTTTTTACGCCCGCGCCTGTGGTGGCGCAGCCGTACTCTTGACGATGGTCTTGCCCGCACCCTGGT
AGACAGCCAGAGAGCACTGCTGAGTGCGATGGCTGAATCGGCTCCCATGCTGGCGCTTGACCTTGAGATGACAGGGCTCG
ACCCCGGGCGGGATCAGATCCTGGCCATCGGCGTAGTGCCCATCGACGGCGGCATTATCCAGCTGCAGGGCGCTGAGTCG
GTCTTGGTGGAAATTCAGGGCAGCGTGGGGCAAAGCGCCGTTATTCACGGGATCACAGATAGAGAGCTTCACAACGCACT
GCCATTGGCAGATGCCATGAACTGGCTGATGCAAAAAATGAACGGCAGAATACTGGTGGCCCACCATGCACCTCTGGATT
TGGCTTTTATCCGCGCCAACATGAGTCGCAGCCTCGGGATCAGCATGCCAATGCTGGCCATTGATACCCTGGCGCTGGAG
AGGCAACGGCTACTGCGGATACATGACGCTATCCAGGAGGGGAGCCTGAGACTTGGCGCCAGTCGGCAACGATATGGCTT
ACCGGTTTACGACGCCCACAATGCACTGACCGACGCTTTGTCCTGTGCTGAACTCTTGTTGGCACAGCTTGCGGCCATCG
GCGGCGCCCATACCCGCGTTGCTGAGCTTGTCACCCTCTGCGACTAG

Upstream 100 bases:

>100_bases
AGCAGCTGTCTTCTCTGGTTCGCCACCAACTGCGGGATGCATTCAAAGTTGTGCATGATGCCCAGTCGGGGCTCAGGCTT
AAATTTATGCGGAGCTTTTA

Downstream 100 bases:

>100_bases
TCATATTCATTTACAGATTTTCATTCTGTTTTCAGGTGCTTTGGTTCTACTCTTCAGTGAATGTCCATTCCTTTGGGAAC
GCTTATGCCTTTACCCCTTC

Product: DNA polymerase III subunit epsilon-related 3'-5' exonuclease-like protein

Products: NA

Alternate protein names: Exonuclease RNAse T And DNA Polymerase III; DNA Polymerase III Epsilon Subunit; Exonuclease; DNA Polymerase Exonuclease Activity; DNA Polymerase III Subunit; Exonuclease Superfamily; DNA Polymerase; 3-5' Exonuclease; DNA Polymerase III; Exonuclase

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MVSRAFLRPRLWWRSRTLDDGLARTLVDSQRALLSAMAESAPMLALDLEMTGLDPGRDQILAIGVVPIDGGIIQLQGAES
VLVEIQGSVGQSAVIHGITDRELHNALPLADAMNWLMQKMNGRILVAHHAPLDLAFIRANMSRSLGISMPMLAIDTLALE
RQRLLRIHDAIQEGSLRLGASRQRYGLPVYDAHNALTDALSCAELLLAQLAAIGGAHTRVAELVTLCD

Sequences:

>Translated_228_residues
MVSRAFLRPRLWWRSRTLDDGLARTLVDSQRALLSAMAESAPMLALDLEMTGLDPGRDQILAIGVVPIDGGIIQLQGAES
VLVEIQGSVGQSAVIHGITDRELHNALPLADAMNWLMQKMNGRILVAHHAPLDLAFIRANMSRSLGISMPMLAIDTLALE
RQRLLRIHDAIQEGSLRLGASRQRYGLPVYDAHNALTDALSCAELLLAQLAAIGGAHTRVAELVTLCD
>Mature_228_residues
MVSRAFLRPRLWWRSRTLDDGLARTLVDSQRALLSAMAESAPMLALDLEMTGLDPGRDQILAIGVVPIDGGIIQLQGAES
VLVEIQGSVGQSAVIHGITDRELHNALPLADAMNWLMQKMNGRILVAHHAPLDLAFIRANMSRSLGISMPMLAIDTLALE
RQRLLRIHDAIQEGSLRLGASRQRYGLPVYDAHNALTDALSCAELLLAQLAAIGGAHTRVAELVTLCD

Specific function: Unknown

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24734; Mature: 24734

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSRAFLRPRLWWRSRTLDDGLARTLVDSQRALLSAMAESAPMLALDLEMTGLDPGRDQI
CCCCHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCE
LAIGVVPIDGGIIQLQGAESVLVEIQGSVGQSAVIHGITDRELHNALPLADAMNWLMQKM
EEEEEEECCCCEEEECCCCEEEEEEECCCCCCCEEECCCHHHHHHCCCHHHHHHHHHHHH
NGRILVAHHAPLDLAFIRANMSRSLGISMPMLAIDTLALERQRLLRIHDAIQEGSLRLGA
CCCEEEEECCCCEEEEEECCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECC
SRQRYGLPVYDAHNALTDALSCAELLLAQLAAIGGAHTRVAELVTLCD
CCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MVSRAFLRPRLWWRSRTLDDGLARTLVDSQRALLSAMAESAPMLALDLEMTGLDPGRDQI
CCCCHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCE
LAIGVVPIDGGIIQLQGAESVLVEIQGSVGQSAVIHGITDRELHNALPLADAMNWLMQKM
EEEEEEECCCCEEEECCCCEEEEEEECCCCCCCEEECCCHHHHHHCCCHHHHHHHHHHHH
NGRILVAHHAPLDLAFIRANMSRSLGISMPMLAIDTLALERQRLLRIHDAIQEGSLRLGA
CCCEEEEECCCCEEEEEECCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECC
SRQRYGLPVYDAHNALTDALSCAELLLAQLAAIGGAHTRVAELVTLCD
CCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA