Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774506

Identifier: 119774506

GI number: 119774506

Start: 1660919

End: 1661326

Strand: Direct

Name: 119774506

Synonym: Sama_1369

Alternate gene names: NA

Gene position: 1660919-1661326 (Clockwise)

Preceding gene: 119774505

Following gene: 119774507

Centisome position: 38.57

GC content: 52.45

Gene sequence:

>408_bases
ATGTGGAGCAAAATTGCCAAAGCGGGCCGGGTTATGGCCGCCCTGTGTATACTCGGCGCCCTGAGCGCCTGTGTGACGGT
AGAGGAGCCCAAACCCATAATCATTAATGGCGCGGCGGGTTATCTTGAGTCTGTGGTGTTGCCGCCAAACAGCACCATTA
CCATTGCGGTTATCGATTTAGACACCCCCGGCATTATCATCGCTCAGAAAACCTTTAATGTGGTGCGCGCGCCAGTGCCC
TTCAAGTTTATTTTGCCGGCCGAGACTATCAGCAGCAATGTGAACTACGGGGTGGTGGCACTTATCAAACACAACAACCA
GGTGATTTTCCAAACCTACGATCGCTTTCCGGTGATCCACAACAACAAGTTCACCACCGAAGTGGTGATGAAGCCGGTTG
GCAGGTAA

Upstream 100 bases:

>100_bases
GCCGCGGTTTTGTAAAAGGACATTTTTTCAATCGCCGTGGTGAGCTGGTGGCGTCGGCTACTCAGGAAGGATTGATGCGT
ATGAAAAAGGACAGCAACTG

Downstream 100 bases:

>100_bases
TCAGCCGTGTCATCGCCCATTTCTGCCAAGCCGCTGGCCACGGATGTCTTGCAGGACAGATTGGCCAGCTTGGTGCGGGA
AGACGCGGTTGCGATGACCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MWSKIAKAGRVMAALCILGALSACVTVEEPKPIIINGAAGYLESVVLPPNSTITIAVIDLDTPGIIIAQKTFNVVRAPVP
FKFILPAETISSNVNYGVVALIKHNNQVIFQTYDRFPVIHNNKFTTEVVMKPVGR

Sequences:

>Translated_135_residues
MWSKIAKAGRVMAALCILGALSACVTVEEPKPIIINGAAGYLESVVLPPNSTITIAVIDLDTPGIIIAQKTFNVVRAPVP
FKFILPAETISSNVNYGVVALIKHNNQVIFQTYDRFPVIHNNKFTTEVVMKPVGR
>Mature_135_residues
MWSKIAKAGRVMAALCILGALSACVTVEEPKPIIINGAAGYLESVVLPPNSTITIAVIDLDTPGIIIAQKTFNVVRAPVP
FKFILPAETISSNVNYGVVALIKHNNQVIFQTYDRFPVIHNNKFTTEVVMKPVGR

Specific function: Unknown

COG id: COG3126

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14631; Mature: 14631

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSKIAKAGRVMAALCILGALSACVTVEEPKPIIINGAAGYLESVVLPPNSTITIAVIDL
CCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCHHHEEEEECCCCEEEEEEEEE
DTPGIIIAQKTFNVVRAPVPFKFILPAETISSNVNYGVVALIKHNNQVIFQTYDRFPVIH
CCCCEEEEECCCEEEECCCCEEEEECHHHHCCCCCCEEEEEEECCCEEEEEECCCCCEEE
NNKFTTEVVMKPVGR
CCCEEEEEEEECCCC
>Mature Secondary Structure
MWSKIAKAGRVMAALCILGALSACVTVEEPKPIIINGAAGYLESVVLPPNSTITIAVIDL
CCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCHHHEEEEECCCCEEEEEEEEE
DTPGIIIAQKTFNVVRAPVPFKFILPAETISSNVNYGVVALIKHNNQVIFQTYDRFPVIH
CCCCEEEEECCCEEEECCCCEEEEECHHHHCCCCCCEEEEEEECCCEEEEEECCCCCEEE
NNKFTTEVVMKPVGR
CCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA