Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773938

Identifier: 119773938

GI number: 119773938

Start: 984758

End: 985237

Strand: Reverse

Name: 119773938

Synonym: Sama_0801

Alternate gene names: NA

Gene position: 985237-984758 (Counterclockwise)

Preceding gene: 119773939

Following gene: 119773937

Centisome position: 22.88

GC content: 55.83

Gene sequence:

>480_bases
ATGCAACTCAGGGCGATTCAGGCCAACGATTGGCAAGCAATTCTCAATATTCAGGACGAATGCTACAACGCAGTGGATCC
AGAGCCGCTACACGTGCTTAAAAGCAAGTGGGAAGTCTCACCAGACTCTTGTTTTGTAATGGAAAAAGATGGTCAGGTGC
TGGGCTACTGCTTGGCGCATCCCTGGGTGGAAACCACTCCGCCACCTCTGTATCACGCCCTGACTGAACTGCCCGCACCC
AATACCCTTTATCTGCATGACATGGCCATTTCCGCCCGTGCGCAGGGCCTGGGTGCCGGCGGCAAGGCCCTGTCCAAGCT
TAAGCAATTGGCCGAACGCTGGTCACTGAACTCCCTGTCTCTGGTGGCAGTTCAGGGCGCCGACAGCTACTGGCGCCGTC
AGGGCTTTGCCGACAGCCAAAGCCTCAAATGTCTTGGCAGCTACAGTGACGATGCCAGCTATATGATACTGCCCCTGTGA

Upstream 100 bases:

>100_bases
TTGAGCAGCACCTGCGTCAACGCTATCTGGGCGAATAACCCAGTCTCGGGTATAATTGCGCCCTTTGTGATTTGAACAGG
CAGTAAGCAAAGGGCGTACC

Downstream 100 bases:

>100_bases
GCCAATTATGCACCCGGCATTGACCACTGTTGCCCTGCTCTGTCTGTCGAATATCTTTATGACATTCGCCTGGTATGGAC
ATCTCAAGTCGCTCAACCAT

Product: acetyltransferase

Products: NA

Alternate protein names: Acetyltransferase; Gcn5-Related N-Acetyltransferase; GCN5-Like N-Acetyltransferase; GNAT Family Acetyltransferase; Acetyltransferase GNAT Family Protein

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MQLRAIQANDWQAILNIQDECYNAVDPEPLHVLKSKWEVSPDSCFVMEKDGQVLGYCLAHPWVETTPPPLYHALTELPAP
NTLYLHDMAISARAQGLGAGGKALSKLKQLAERWSLNSLSLVAVQGADSYWRRQGFADSQSLKCLGSYSDDASYMILPL

Sequences:

>Translated_159_residues
MQLRAIQANDWQAILNIQDECYNAVDPEPLHVLKSKWEVSPDSCFVMEKDGQVLGYCLAHPWVETTPPPLYHALTELPAP
NTLYLHDMAISARAQGLGAGGKALSKLKQLAERWSLNSLSLVAVQGADSYWRRQGFADSQSLKCLGSYSDDASYMILPL
>Mature_159_residues
MQLRAIQANDWQAILNIQDECYNAVDPEPLHVLKSKWEVSPDSCFVMEKDGQVLGYCLAHPWVETTPPPLYHALTELPAP
NTLYLHDMAISARAQGLGAGGKALSKLKQLAERWSLNSLSLVAVQGADSYWRRQGFADSQSLKCLGSYSDDASYMILPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17621; Mature: 17621

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLRAIQANDWQAILNIQDECYNAVDPEPLHVLKSKWEVSPDSCFVMEKDGQVLGYCLAH
CCEEEECCCCCEEEEEECHHHCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCEEEHEECC
PWVETTPPPLYHALTELPAPNTLYLHDMAISARAQGLGAGGKALSKLKQLAERWSLNSLS
CCCCCCCCHHHHHHHHCCCCCEEEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEE
LVAVQGADSYWRRQGFADSQSLKCLGSYSDDASYMILPL
EEEEECCCHHHHHCCCCCCCCEEEEECCCCCCCEEEEEC
>Mature Secondary Structure
MQLRAIQANDWQAILNIQDECYNAVDPEPLHVLKSKWEVSPDSCFVMEKDGQVLGYCLAH
CCEEEECCCCCEEEEEECHHHCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCEEEHEECC
PWVETTPPPLYHALTELPAPNTLYLHDMAISARAQGLGAGGKALSKLKQLAERWSLNSLS
CCCCCCCCHHHHHHHHCCCCCEEEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEE
LVAVQGADSYWRRQGFADSQSLKCLGSYSDDASYMILPL
EEEEECCCHHHHHCCCCCCCCEEEEECCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA