| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is folK [H]
Identifier: 119773914
GI number: 119773914
Start: 959663
End: 960151
Strand: Reverse
Name: folK [H]
Synonym: Sama_0777
Alternate gene names: 119773914
Gene position: 960151-959663 (Counterclockwise)
Preceding gene: 119773915
Following gene: 119773913
Centisome position: 22.3
GC content: 58.69
Gene sequence:
>489_bases ATGACCCAGGTTTATGTGGCTCTCGGCGCCAATCTCGCCGAGCCCATCAGCCAACTGAACAGGGCCTGCGAGGCCCTGTT GTCCTTGGCAGCCCCAGGCAGTTTCAGGGTATCGCCTTACTATGGCAGTCGCCCTATGGGCGAGGTAGCACAGCCCGATT ACGTCAATGCCGTCGCCTGCTTTGACACAGAGCTTGAACCGCTGACGCTGCTGGATGCCCTGCAGGCCATTGAACTTGAC CAGGGCCGTGAGCGTGTGGTGCGCTGGGGTCCCCGCACCCTGGATTTGGATTTGTTGCTGTATGGCAATCAAGTGATTTG CAGTGACAGACTCACAGTGCCCCACTACGGCATGACAGACCGCAGTTTTGTACTTATTCCGCTGGAAAGCCTGGCACCCG GGCTGATGTTGCCCTGTGGCACCCCAGTCCAGAGCCTTATCACCCAGGCAATGCGGGACGAGCTTCACCAACTGACACCC TGCGATTGA
Upstream 100 bases:
>100_bases ATGCTCCCCGCAACCGCAAACGCCGCGTTCGCCGTCGCCCCCGCAGTGAAGGTGGCAGTGGCGAAGGAGCCAAGGCAAAC ACCGGCAGCGACAGCTGAAT
Downstream 100 bases:
>100_bases AGTCAGACCTCAGTTGGCTTATAACTCCACTTCACACTCGCTGGTAGAGAAACGCATTATGTCCAAAGTCACCACCTCAA CCCTGATGAAGTTTAAACAG
Product: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
Products: NA
Alternate protein names: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase; PPPK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; HPPK [H]
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MTQVYVALGANLAEPISQLNRACEALLSLAAPGSFRVSPYYGSRPMGEVAQPDYVNAVACFDTELEPLTLLDALQAIELD QGRERVVRWGPRTLDLDLLLYGNQVICSDRLTVPHYGMTDRSFVLIPLESLAPGLMLPCGTPVQSLITQAMRDELHQLTP CD
Sequences:
>Translated_162_residues MTQVYVALGANLAEPISQLNRACEALLSLAAPGSFRVSPYYGSRPMGEVAQPDYVNAVACFDTELEPLTLLDALQAIELD QGRERVVRWGPRTLDLDLLLYGNQVICSDRLTVPHYGMTDRSFVLIPLESLAPGLMLPCGTPVQSLITQAMRDELHQLTP CD >Mature_161_residues TQVYVALGANLAEPISQLNRACEALLSLAAPGSFRVSPYYGSRPMGEVAQPDYVNAVACFDTELEPLTLLDALQAIELDQ GRERVVRWGPRTLDLDLLLYGNQVICSDRLTVPHYGMTDRSFVLIPLESLAPGLMLPCGTPVQSLITQAMRDELHQLTPC D
Specific function: Dihydrofolate biosynthesis; first step. [C]
COG id: COG0801
COG function: function code H; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HPPK family [H]
Homologues:
Organism=Escherichia coli, GI1786335, Length=158, Percent_Identity=46.2025316455696, Blast_Score=146, Evalue=7e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000550 [H]
Pfam domain/function: PF01288 HPPK [H]
EC number: =2.7.6.3 [H]
Molecular weight: Translated: 17775; Mature: 17644
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: PS00794 HPPK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQVYVALGANLAEPISQLNRACEALLSLAAPGSFRVSPYYGSRPMGEVAQPDYVNAVAC CCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCEEEE FDTELEPLTLLDALQAIELDQGRERVVRWGPRTLDLDLLLYGNQVICSDRLTVPHYGMTD ECCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEEECCEEEECCCCCCCCCCCCC RSFVLIPLESLAPGLMLPCGTPVQSLITQAMRDELHQLTPCD CCEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TQVYVALGANLAEPISQLNRACEALLSLAAPGSFRVSPYYGSRPMGEVAQPDYVNAVAC CEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCEEEE FDTELEPLTLLDALQAIELDQGRERVVRWGPRTLDLDLLLYGNQVICSDRLTVPHYGMTD ECCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEEECCEEEECCCCCCCCCCCCC RSFVLIPLESLAPGLMLPCGTPVQSLITQAMRDELHQLTPCD CCEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10080886 [H]