| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119773726
Identifier: 119773726
GI number: 119773726
Start: 734310
End: 734819
Strand: Reverse
Name: 119773726
Synonym: Sama_0588
Alternate gene names: NA
Gene position: 734819-734310 (Counterclockwise)
Preceding gene: 119773727
Following gene: 119773725
Centisome position: 17.06
GC content: 52.55
Gene sequence:
>510_bases ATGAAGAAATACCTGCTGACCCTGCTGGCCTGCTGGCCCTTGCTGGGGCACACCGAAACCAGCTTTCAGAGTAATGAAGG CTTTATCGCCGATGCGCTGGGTGCAGTTCCCAAGGCCAGTGTGTTGTGGTTGGATGATACCCAAAAGGCCAACATTGAGA ACATTCTTGCCCACGCCTACAACAAACTCCGAGTAAGGTACTGGCGCGATGGGGCACAGACGGTGTGGATACTGGACGAA ATCGGTAAAGAATCTCCTATCACTGTTGGCATCCACATCGCCAATCAACAGATAGTCAAAACCAAGGTACTGGTATACAG AGAAAGCCGCGGTGATGAGGTCAGGCATGACTTCTTTACCAACCAGTTCAAATCGGCGACACTGACGCCCTCCCTTGAAC TGGATCGCAGTATCGATGGCATCACAGGGGCAACCCTGTCGGTAAGAGCCCTGACCAAGTTGTCCCGGATAGCCCTGTAT CTGGATGCTGCCGTGCAAAAGACCCCATAA
Upstream 100 bases:
>100_bases CCTGGATTCTGATGGCTTCAACCTGGGTGTTGGCTACCAGTTCTGATGCAAGTAGATAAAGGGGGCGTAAGCCCCCTTTT ACCTGAGTGACTGCATAACC
Downstream 100 bases:
>100_bases CGGATGACTCGACGCCCTTCAAATACAGCCGGTAAACAACTCGGCCACCGGCTGCGCAAACAAATCCGCCCCTGGCACAG ACGCATCGGCATTATCGGTG
Product: FMN-binding
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MKKYLLTLLACWPLLGHTETSFQSNEGFIADALGAVPKASVLWLDDTQKANIENILAHAYNKLRVRYWRDGAQTVWILDE IGKESPITVGIHIANQQIVKTKVLVYRESRGDEVRHDFFTNQFKSATLTPSLELDRSIDGITGATLSVRALTKLSRIALY LDAAVQKTP
Sequences:
>Translated_169_residues MKKYLLTLLACWPLLGHTETSFQSNEGFIADALGAVPKASVLWLDDTQKANIENILAHAYNKLRVRYWRDGAQTVWILDE IGKESPITVGIHIANQQIVKTKVLVYRESRGDEVRHDFFTNQFKSATLTPSLELDRSIDGITGATLSVRALTKLSRIALY LDAAVQKTP >Mature_169_residues MKKYLLTLLACWPLLGHTETSFQSNEGFIADALGAVPKASVLWLDDTQKANIENILAHAYNKLRVRYWRDGAQTVWILDE IGKESPITVGIHIANQQIVKTKVLVYRESRGDEVRHDFFTNQFKSATLTPSLELDRSIDGITGATLSVRALTKLSRIALY LDAAVQKTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18926; Mature: 18926
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYLLTLLACWPLLGHTETSFQSNEGFIADALGAVPKASVLWLDDTQKANIENILAHAY CHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHH NKLRVRYWRDGAQTVWILDEIGKESPITVGIHIANQQIVKTKVLVYRESRGDEVRHDFFT HHEEEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHH NQFKSATLTPSLELDRSIDGITGATLSVRALTKLSRIALYLDAAVQKTP HCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKYLLTLLACWPLLGHTETSFQSNEGFIADALGAVPKASVLWLDDTQKANIENILAHAY CHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHH NKLRVRYWRDGAQTVWILDEIGKESPITVGIHIANQQIVKTKVLVYRESRGDEVRHDFFT HHEEEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHH NQFKSATLTPSLELDRSIDGITGATLSVRALTKLSRIALYLDAAVQKTP HCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA