Click here to switch to the map view.

The map label for this gene is 119773725

Identifier: 119773725

GI number: 119773725

Start: 733548

End: 734306

Strand: Reverse

Name: 119773725

Synonym: Sama_0587

Alternate gene names: NA

Gene position: 734306-733548 (Counterclockwise)

Preceding gene: 119773726

Following gene: 119773724

Centisome position: 17.05

GC content: 54.28

Gene sequence:

>759_bases
ATGACTCGACGCCCTTCAAATACAGCCGGTAAACAACTCGGCCACCGGCTGCGCAAACAAATCCGCCCCTGGCACAGACG
CATCGGCATTATCGGTGGCCTGTTTTTGTTATTTCTGACAGTAACCGGCGTACTGATAAACCACGCCGACGACGCAGGGC
TTGGACACGCCAAGGTGCGTTTGCCCTGGTTATTGGATTATTACGGTATCCAGCTCCCTTCCCACAGCGCGCAATTTGGC
GACTATGGCATCACGGATAATTTGCTGTGGCACCAAGGCACTATGGTGCTGGAAGCCAAACACTCCCTCATCGCCGCAAC
CCAATGGCGCAATCAAACCATCGCCATCGATGCCGAAAACCTGTATCTGCTCAACGCTGATGGCCAGTTGGTAGAAACCC
AGAATAAAGCCACGGGGCTACCGTCCCCCCTCAAGGCCATGGCCATCGAAGGAGAATCTCATTTGTGGCTGAGCGGCGAC
AATGGGCAATATCTCGCGGATGAAGATCTGATTGAGTGGCAACCCGCCACCTCATTTGCACCATTGCATTGGCTTGAAGG
CGAGGCGGCTGAACAACAGTTACTGGAAGATGCCCGCAGCGCACACCTGCACTGGGAACGGGTATTGCTCGACCTGCATG
CAGGCCGGATATTCGGTCAATGGGGCGTCTGGCTTTGGGATCTGCTCGCCCTTGGCTTTGTATTTTTGTCTTTGAGCGGT
CTCTACATCTGGATAAGCCAGCAACCCAAACGCAAATAA

Upstream 100 bases:

>100_bases
CGATGGCATCACAGGGGCAACCCTGTCGGTAAGAGCCCTGACCAAGTTGTCCCGGATAGCCCTGTATCTGGATGCTGCCG
TGCAAAAGACCCCATAACGG

Downstream 100 bases:

>100_bases
ACTGGGCCGCAGATAAAAAAAGACCCGGCATAAGCCGGGTAAAGCAACTGGGCTAAAGCACAGTAACCCAATTGAGGCAA
TGAAATGGGGTTGAGGGGTC

Product: PepSY-associated TM helix

Products: NA

Alternate protein names: PepSY-Associated TM Helix; Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Family Protein; PepSY-Associated TM Helix Family

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MTRRPSNTAGKQLGHRLRKQIRPWHRRIGIIGGLFLLFLTVTGVLINHADDAGLGHAKVRLPWLLDYYGIQLPSHSAQFG
DYGITDNLLWHQGTMVLEAKHSLIAATQWRNQTIAIDAENLYLLNADGQLVETQNKATGLPSPLKAMAIEGESHLWLSGD
NGQYLADEDLIEWQPATSFAPLHWLEGEAAEQQLLEDARSAHLHWERVLLDLHAGRIFGQWGVWLWDLLALGFVFLSLSG
LYIWISQQPKRK

Sequences:

>Translated_252_residues
MTRRPSNTAGKQLGHRLRKQIRPWHRRIGIIGGLFLLFLTVTGVLINHADDAGLGHAKVRLPWLLDYYGIQLPSHSAQFG
DYGITDNLLWHQGTMVLEAKHSLIAATQWRNQTIAIDAENLYLLNADGQLVETQNKATGLPSPLKAMAIEGESHLWLSGD
NGQYLADEDLIEWQPATSFAPLHWLEGEAAEQQLLEDARSAHLHWERVLLDLHAGRIFGQWGVWLWDLLALGFVFLSLSG
LYIWISQQPKRK
>Mature_251_residues
TRRPSNTAGKQLGHRLRKQIRPWHRRIGIIGGLFLLFLTVTGVLINHADDAGLGHAKVRLPWLLDYYGIQLPSHSAQFGD
YGITDNLLWHQGTMVLEAKHSLIAATQWRNQTIAIDAENLYLLNADGQLVETQNKATGLPSPLKAMAIEGESHLWLSGDN
GQYLADEDLIEWQPATSFAPLHWLEGEAAEQQLLEDARSAHLHWERVLLDLHAGRIFGQWGVWLWDLLALGFVFLSLSGL
YIWISQQPKRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28474; Mature: 28343

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRPSNTAGKQLGHRLRKQIRPWHRRIGIIGGLFLLFLTVTGVLINHADDAGLGHAKVR
CCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
LPWLLDYYGIQLPSHSAQFGDYGITDNLLWHQGTMVLEAKHSLIAATQWRNQTIAIDAEN
CCEEEHHHCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCEEEEECCCCCEEEEECCC
LYLLNADGQLVETQNKATGLPSPLKAMAIEGESHLWLSGDNGQYLADEDLIEWQPATSFA
EEEECCCCCEEECCCCCCCCCCCHHHEEECCCCEEEEECCCCCEECCCCCCCCCCCCCCC
PLHWLEGEAAEQQLLEDARSAHLHWERVLLDLHAGRIFGQWGVWLWDLLALGFVFLSLSG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCC
LYIWISQQPKRK
EEEEEECCCCCC
>Mature Secondary Structure 
TRRPSNTAGKQLGHRLRKQIRPWHRRIGIIGGLFLLFLTVTGVLINHADDAGLGHAKVR
CCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
LPWLLDYYGIQLPSHSAQFGDYGITDNLLWHQGTMVLEAKHSLIAATQWRNQTIAIDAEN
CCEEEHHHCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCEEEEECCCCCEEEEECCC
LYLLNADGQLVETQNKATGLPSPLKAMAIEGESHLWLSGDNGQYLADEDLIEWQPATSFA
EEEECCCCCEEECCCCCCCCCCCHHHEEECCCCEEEEECCCCCEECCCCCCCCCCCCCCC
PLHWLEGEAAEQQLLEDARSAHLHWERVLLDLHAGRIFGQWGVWLWDLLALGFVFLSLSG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCC
LYIWISQQPKRK
EEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA