| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is mro [H]
Identifier: 119773675
GI number: 119773675
Start: 659093
End: 660118
Strand: Reverse
Name: mro [H]
Synonym: Sama_0535
Alternate gene names: 119773675
Gene position: 660118-659093 (Counterclockwise)
Preceding gene: 119773676
Following gene: 119773668
Centisome position: 15.33
GC content: 55.85
Gene sequence:
>1026_bases ATGGTGCGTCACTCAGTGCTCGACGCCTGGAAGGATCCCAGGGGCGGAGAAATTGAACGGGTTCGATTGGACAACGGCCA GTTGGCCATCGAAGTACTGAGTCTGGGCGGTATTATTCGCTCACTATGGGCTCCTGACAGCCGGGGCGAGCGCGCCAATC TGGTACTTGGGTGTGACAGTCTTGAAGACTATCTCGCCCAGAATGCGCACCTTGGCGCCATTGCCGGACGCTATGCCAAC CGTATCGCCCTCGGCAAATTGCACTATGACGGTGAAGACTTCCAACTGGATATCAATCAGGCAACCAACTGCCTCCATGG TGGCCATGAGGGTTTTAATCGCAAACAATGGGCGCTGGGATTGCTTCCCGACGGTGTGCGTCTGAGCCTTAGCAGCCCAG ATGGCGATATGGGGTTTCCAGGCAATTGCTCGGTCCAGCTGGATTACCGGCTAGCGGGCAATAACCTCTACGTGGAAATC ATGGCGATGACCGATAGGCCCTGCCCGGTCAACCTTACCCAGCACAGCTACTTTAACCTTGACGGACGTGCCGATTGTCT CGATCACACAGTGACCATGCACGCCAGGGCGTTTCTGCGCTGTAACGAGGCAGGGATACCCACAGGACGCGCCACCACCG CAGGCACACCGCTGGCATTGCAGGATGTTCGCCTTGGTGACCGGGTACAACACCCGGACCTTGCCAGCACACGCGGTTTT GACCACTGTTTTATTATCGATAAGACACAGGACGAGCTGGCGTTGGCAGCCGAGCTACACAGCCCACACTCGGGCAGACT CCTTAAACTCTATACCAATCAGCCGGGCGTACAGCTCTACGGGGCGAATTTTCTCGATGGCGAACGGGGCAGGCAGGGCA AAATTTATCGACCCTATCAGGGTGTTTGCCTCGAACCACAGCTGTTTCCCGATGCACCAAATCAACCCGATTTGGGCAAG GCCTGGTTAATGCCGGGGGAGATTTATCATCATATCAGTCGTTATCAGTTCGAGGTAAAAGACTGA
Upstream 100 bases:
>100_bases GCTGATTTTTTCAGCCAAAACATACGAATGCAATCACTGTTTCGCGCCTGGGCTATCGTTTATAGTGCATTGACTTTAAT ACAGATAAGGCAATCTATTC
Downstream 100 bases:
>100_bases ACCGGGCTGACCGCAAGCGCCATTAACGAGACTCAGCGCCCTATTGCCGACAATATGAGTGAAGGTGCAAAAGCAGGTGA TGCTGCTGGGTGAGAGCTAA
Product: aldose 1-epimerase
Products: NA
Alternate protein names: Galactose mutarotase; Type-1 mutarotase [H]
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MVRHSVLDAWKDPRGGEIERVRLDNGQLAIEVLSLGGIIRSLWAPDSRGERANLVLGCDSLEDYLAQNAHLGAIAGRYAN RIALGKLHYDGEDFQLDINQATNCLHGGHEGFNRKQWALGLLPDGVRLSLSSPDGDMGFPGNCSVQLDYRLAGNNLYVEI MAMTDRPCPVNLTQHSYFNLDGRADCLDHTVTMHARAFLRCNEAGIPTGRATTAGTPLALQDVRLGDRVQHPDLASTRGF DHCFIIDKTQDELALAAELHSPHSGRLLKLYTNQPGVQLYGANFLDGERGRQGKIYRPYQGVCLEPQLFPDAPNQPDLGK AWLMPGEIYHHISRYQFEVKD
Sequences:
>Translated_341_residues MVRHSVLDAWKDPRGGEIERVRLDNGQLAIEVLSLGGIIRSLWAPDSRGERANLVLGCDSLEDYLAQNAHLGAIAGRYAN RIALGKLHYDGEDFQLDINQATNCLHGGHEGFNRKQWALGLLPDGVRLSLSSPDGDMGFPGNCSVQLDYRLAGNNLYVEI MAMTDRPCPVNLTQHSYFNLDGRADCLDHTVTMHARAFLRCNEAGIPTGRATTAGTPLALQDVRLGDRVQHPDLASTRGF DHCFIIDKTQDELALAAELHSPHSGRLLKLYTNQPGVQLYGANFLDGERGRQGKIYRPYQGVCLEPQLFPDAPNQPDLGK AWLMPGEIYHHISRYQFEVKD >Mature_341_residues MVRHSVLDAWKDPRGGEIERVRLDNGQLAIEVLSLGGIIRSLWAPDSRGERANLVLGCDSLEDYLAQNAHLGAIAGRYAN RIALGKLHYDGEDFQLDINQATNCLHGGHEGFNRKQWALGLLPDGVRLSLSSPDGDMGFPGNCSVQLDYRLAGNNLYVEI MAMTDRPCPVNLTQHSYFNLDGRADCLDHTVTMHARAFLRCNEAGIPTGRATTAGTPLALQDVRLGDRVQHPDLASTRGF DHCFIIDKTQDELALAAELHSPHSGRLLKLYTNQPGVQLYGANFLDGERGRQGKIYRPYQGVCLEPQLFPDAPNQPDLGK AWLMPGEIYHHISRYQFEVKD
Specific function: Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose [H]
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldose epimerase family [H]
Homologues:
Organism=Homo sapiens, GI20270355, Length=330, Percent_Identity=42.4242424242424, Blast_Score=247, Evalue=9e-66, Organism=Escherichia coli, GI1786971, Length=322, Percent_Identity=37.888198757764, Blast_Score=214, Evalue=6e-57, Organism=Caenorhabditis elegans, GI17557428, Length=324, Percent_Identity=30.2469135802469, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI115533334, Length=324, Percent_Identity=30.2469135802469, Blast_Score=146, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6319493, Length=310, Percent_Identity=27.4193548387097, Blast_Score=102, Evalue=7e-23, Organism=Saccharomyces cerevisiae, GI6324399, Length=316, Percent_Identity=28.4810126582279, Blast_Score=87, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6322004, Length=356, Percent_Identity=26.4044943820225, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI24659048, Length=342, Percent_Identity=36.8421052631579, Blast_Score=200, Evalue=1e-51, Organism=Drosophila melanogaster, GI24668278, Length=337, Percent_Identity=33.2344213649852, Blast_Score=176, Evalue=1e-44, Organism=Drosophila melanogaster, GI24583720, Length=326, Percent_Identity=33.1288343558282, Blast_Score=166, Evalue=2e-41, Organism=Drosophila melanogaster, GI24641876, Length=347, Percent_Identity=30.835734870317, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI24668282, Length=347, Percent_Identity=31.4121037463977, Blast_Score=157, Evalue=7e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018052 - InterPro: IPR008183 - InterPro: IPR015443 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.3 [H]
Molecular weight: Translated: 37808; Mature: 37808
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRHSVLDAWKDPRGGEIERVRLDNGQLAIEVLSLGGIIRSLWAPDSRGERANLVLGCDS CCCCHHHHHHCCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHCCCCCCCCCEEEEEECCH LEDYLAQNAHLGAIAGRYANRIALGKLHYDGEDFQLDINQATNCLHGGHEGFNRKQWALG HHHHHHCCCCCHHHHHHHHCEEEEEEEEECCCCEEEEHHHHHHHHCCCCCCCCCCEEEEE LLPDGVRLSLSSPDGDMGFPGNCSVQLDYRLAGNNLYVEIMAMTDRPCPVNLTQHSYFNL ECCCCEEEEECCCCCCCCCCCCEEEEEEEEEECCEEEEEEEEECCCCCCCEECCCEEECC DGRADCLDHTVTMHARAFLRCNEAGIPTGRATTAGTPLALQDVRLGDRVQHPDLASTRGF CCCCHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHCCCC DHCFIIDKTQDELALAAELHSPHSGRLLKLYTNQPGVQLYGANFLDGERGRQGKIYRPYQ CEEEEEECCCCCEEEEEHHCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEECCCC GVCLEPQLFPDAPNQPDLGKAWLMPGEIYHHISRYQFEVKD CEEECCCCCCCCCCCCCCCCEEECCHHHHHHHHHEEEEECC >Mature Secondary Structure MVRHSVLDAWKDPRGGEIERVRLDNGQLAIEVLSLGGIIRSLWAPDSRGERANLVLGCDS CCCCHHHHHHCCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHCCCCCCCCCEEEEEECCH LEDYLAQNAHLGAIAGRYANRIALGKLHYDGEDFQLDINQATNCLHGGHEGFNRKQWALG HHHHHHCCCCCHHHHHHHHCEEEEEEEEECCCCEEEEHHHHHHHHCCCCCCCCCCEEEEE LLPDGVRLSLSSPDGDMGFPGNCSVQLDYRLAGNNLYVEIMAMTDRPCPVNLTQHSYFNL ECCCCEEEEECCCCCCCCCCCCEEEEEEEEEECCEEEEEEEEECCCCCCCEECCCEEECC DGRADCLDHTVTMHARAFLRCNEAGIPTGRATTAGTPLALQDVRLGDRVQHPDLASTRGF CCCCHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHCCCC DHCFIIDKTQDELALAAELHSPHSGRLLKLYTNQPGVQLYGANFLDGERGRQGKIYRPYQ CEEEEEECCCCCEEEEEHHCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEECCCC GVCLEPQLFPDAPNQPDLGKAWLMPGEIYHHISRYQFEVKD CEEECCCCCCCCCCCCCCCCEEECCHHHHHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3012466; 3531172 [H]