| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is purC
Identifier: 119773631
GI number: 119773631
Start: 602790
End: 603893
Strand: Reverse
Name: purC
Synonym: Sama_0491
Alternate gene names: 119773631
Gene position: 603893-602790 (Counterclockwise)
Preceding gene: 119773632
Following gene: 119773630
Centisome position: 14.02
GC content: 54.35
Gene sequence:
>1104_bases ATGAGTCTTGCTGATTCCGTACTGGCCGTGAACAACGACCTGCCTATCCGTACCGACAAACCCGTGCACAGCGGTAAGGT TCGCAGCGTTTATTGGCTGACCGAGGCCGACAGCGCCCGCCTTATCCGTGAACGCGGCTACGATGTGCCTGCCGACACGC CGCTGGCCATCATGGTGATCTCTGACCGTATCTCCGCCTTCGATTGCATCTTCCACGGTGAAGGCGATCTGCGTGGTATT CCCGGTAAGGGTGCGGCCCTCAATGCCATCTCCAACCACTGGTTTGGTCTGTTTAAAGAAAACGGCCTGGCAGACAGTCA TATCCTCGACATCCCCCATCCTTTTGTGTGGATTGTGCAAAAGGCCCGACCCATTAAAGTGGAAGCCATTATTCGCCAGT ACATCACAGGCTCCATGTGGCGCGCCTACCAAAAAGGTGAGCGGGTGTTCTGCGGTATCACATTGCCTGAGGGGCTGCAG AAGGATCAGAAACTGCCTGAGCTTTTGATCACACCGTCCACCAAGGGCATCCTCACCGGTATTCCCGGCGTGCCAGAACA GGATGACGTAAACATCAGCCGCGCCGATATCGAAGCTAACTTCGAAGCCTTTGGTTTTGAAAAGAAAGAAGATATCGACC TCTATGAAAAGCTTTTGAAAGAAGGCTTTGGGGTGATTTCCGAGGCGCTGGCAAAGCTTGACCAGGTGTTTGTGGATACC AAGTTTGAGTTTGGCTATGTCACCGACAGCAACGGTAATTCCAAGCTGATTTACATGGATGAAGTGGGCACACCGGATTC TTCCCGTATTTGGGACGGCGCCGCCTACCGCGACGGCAAGATTGTGGAAAACTCCAAAGAAGGTTTCCGCCAGTTCCTGC TGAACCACTTCCCGGATCCGGACATCCTGCTCAACAAAGACCGGATGCCTGAGCGTGAAGCCCTGGCCCGCGACAACGCC CTGCCGCTGGATGCCATGATGAACGTATCCCGCACCTACACAGGTATCGCCGAGAAGGTCACCGGCCGCAAGATTGAGCT GTCCGACAATCCCAAGGCGGAAATCATCGCCATCCTCAAAGAGCAGTACGCTTTGGTGGATTAA
Upstream 100 bases:
>100_bases ATCATGCGCTGCAACACCCAATACCCCGGGAAACAGGCACAAACCACAATAAGCCTGCCCGATTTAACCCTTACCCCACA CATTCAGAGGAATACTCGTC
Downstream 100 bases:
>100_bases GGCTTACGCGCTCTGAAACGGCGCGCTTAATTTCTCGCAAGAAACCCCGGCCGATGTCGGGTTTTTTATTTCGCTGACAA CCTTAAGCCTGCCCAAGCCA
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MSLADSVLAVNNDLPIRTDKPVHSGKVRSVYWLTEADSARLIRERGYDVPADTPLAIMVISDRISAFDCIFHGEGDLRGI PGKGAALNAISNHWFGLFKENGLADSHILDIPHPFVWIVQKARPIKVEAIIRQYITGSMWRAYQKGERVFCGITLPEGLQ KDQKLPELLITPSTKGILTGIPGVPEQDDVNISRADIEANFEAFGFEKKEDIDLYEKLLKEGFGVISEALAKLDQVFVDT KFEFGYVTDSNGNSKLIYMDEVGTPDSSRIWDGAAYRDGKIVENSKEGFRQFLLNHFPDPDILLNKDRMPEREALARDNA LPLDAMMNVSRTYTGIAEKVTGRKIELSDNPKAEIIAILKEQYALVD
Sequences:
>Translated_367_residues MSLADSVLAVNNDLPIRTDKPVHSGKVRSVYWLTEADSARLIRERGYDVPADTPLAIMVISDRISAFDCIFHGEGDLRGI PGKGAALNAISNHWFGLFKENGLADSHILDIPHPFVWIVQKARPIKVEAIIRQYITGSMWRAYQKGERVFCGITLPEGLQ KDQKLPELLITPSTKGILTGIPGVPEQDDVNISRADIEANFEAFGFEKKEDIDLYEKLLKEGFGVISEALAKLDQVFVDT KFEFGYVTDSNGNSKLIYMDEVGTPDSSRIWDGAAYRDGKIVENSKEGFRQFLLNHFPDPDILLNKDRMPEREALARDNA LPLDAMMNVSRTYTGIAEKVTGRKIELSDNPKAEIIAILKEQYALVD >Mature_366_residues SLADSVLAVNNDLPIRTDKPVHSGKVRSVYWLTEADSARLIRERGYDVPADTPLAIMVISDRISAFDCIFHGEGDLRGIP GKGAALNAISNHWFGLFKENGLADSHILDIPHPFVWIVQKARPIKVEAIIRQYITGSMWRAYQKGERVFCGITLPEGLQK DQKLPELLITPSTKGILTGIPGVPEQDDVNISRADIEANFEAFGFEKKEDIDLYEKLLKEGFGVISEALAKLDQVFVDTK FEFGYVTDSNGNSKLIYMDEVGTPDSSRIWDGAAYRDGKIVENSKEGFRQFLLNHFPDPDILLNKDRMPEREALARDNAL PLDAMMNVSRTYTGIAEKVTGRKIELSDNPKAEIIAILKEQYALVD
Specific function: Unknown
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family
Homologues:
Organism=Saccharomyces cerevisiae, GI6319326, Length=300, Percent_Identity=32.3333333333333, Blast_Score=101, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PUR7_SHEAM (A1S2U5)
Other databases:
- EMBL: CP000507 - RefSeq: YP_926371.1 - ProteinModelPortal: A1S2U5 - SMR: A1S2U5 - STRING: A1S2U5 - GeneID: 4602746 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_0491 - NMPDR: fig|326297.7.peg.462 - eggNOG: COG0152 - HOGENOM: HBG555040 - OMA: SSRIWDG - PhylomeDB: A1S2U5 - ProtClustDB: PRK13960 - HAMAP: MF_00137 - InterPro: IPR013816 - InterPro: IPR014106 - InterPro: IPR001636 - InterPro: IPR018236 - Gene3D: G3DSA:3.30.470.20 - PANTHER: PTHR11609 - TIGRFAMs: TIGR02735
Pfam domain/function: PF01259 SAICAR_synt
EC number: =6.3.2.6
Molecular weight: Translated: 41013; Mature: 40882
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS01057 SAICAR_SYNTHETASE_1; PS01058 SAICAR_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLADSVLAVNNDLPIRTDKPVHSGKVRSVYWLTEADSARLIRERGYDVPADTPLAIMVI CCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCEEEEEE SDRISAFDCIFHGEGDLRGIPGKGAALNAISNHWFGLFKENGLADSHILDIPHPFVWIVQ ECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHEEEEECCCCCCCEEEECCCCEEEEEE KARPIKVEAIIRQYITGSMWRAYQKGERVFCGITLPEGLQKDQKLPELLITPSTKGILTG CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHCCCCEEECCCCCCEEEC IPGVPEQDDVNISRADIEANFEAFGFEKKEDIDLYEKLLKEGFGVISEALAKLDQVFVDT CCCCCCCCCCCEEEECEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KFEFGYVTDSNGNSKLIYMDEVGTPDSSRIWDGAAYRDGKIVENSKEGFRQFLLNHFPDP CEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCC DILLNKDRMPEREALARDNALPLDAMMNVSRTYTGIAEKVTGRKIELSDNPKAEIIAILK CEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHH EQYALVD HHHHCCC >Mature Secondary Structure SLADSVLAVNNDLPIRTDKPVHSGKVRSVYWLTEADSARLIRERGYDVPADTPLAIMVI CCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCEEEEEE SDRISAFDCIFHGEGDLRGIPGKGAALNAISNHWFGLFKENGLADSHILDIPHPFVWIVQ ECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHEEEEECCCCCCCEEEECCCCEEEEEE KARPIKVEAIIRQYITGSMWRAYQKGERVFCGITLPEGLQKDQKLPELLITPSTKGILTG CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHCCCCEEECCCCCCEEEC IPGVPEQDDVNISRADIEANFEAFGFEKKEDIDLYEKLLKEGFGVISEALAKLDQVFVDT CCCCCCCCCCCEEEECEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KFEFGYVTDSNGNSKLIYMDEVGTPDSSRIWDGAAYRDGKIVENSKEGFRQFLLNHFPDP CEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCC DILLNKDRMPEREALARDNALPLDAMMNVSRTYTGIAEKVTGRKIELSDNPKAEIIAILK CEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHH EQYALVD HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA