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The map label for this gene is yraQ [C]

Identifier: 119773537

GI number: 119773537

Start: 493621

End: 495093

Strand: Direct

Name: yraQ [C]

Synonym: Sama_0397

Alternate gene names: 119773537

Gene position: 493621-495093 (Clockwise)

Preceding gene: 119773536

Following gene: 119773538

Centisome position: 11.46

GC content: 59.06

Gene sequence:

>1473_bases
ATGCTGCTGAACAACTTTCTTCACCTGTTTTTGGAGTCAGCCCCCTGGCTGCTGCTGGGGCTGTTTCTGGCGGGCATGCT
GAAAATGTTTGTGCCCATGGCGTGGATGCAAAAGCAGCTCGGTGGACATGGTTTTAAGGCCACGGTTAAGGCTGCGCTCT
TGGGCGCGCCCTTGCCGCTGTGTTCCTGCGGGGTGATTCCAGCCGCAGTGGGCCTTCGGCGCAGCGGCGCTTCCAAGGCG
GCCACTACCTCGTTTTTGGTGTCTACTCCTGAGACTGGCGTGGATTCTGTGACTGTATCCTACGTGCTGCTTGGCCCCTT
TATGGCGATAGTGCGGCCGATTGCCGCTGTGACCAGCGCCATAGTGGCAGGGCTGCTGGTAGGCCGCGATGAGGATACGC
CGGATAATGCATCCCAATCCGCTGAAACATCGTCTGATAAGCAGTCTGATAAGCCAATAACCCAGGCCGCCAAGCCCGCC
ATGAGCTTCAAACCGGTTGCTGCAAACAGCCCGCTGATGACCCCTACCGGCGCCAAACTTGCAGCCGCCCCAGCGGTGAG
CTTCAAGCCAGTTGCCGAAAACACTGGCAGAAGCTGCTGCTCAGGTAACGCCGAAGCTGAGCCAAAGCCCGAATCCAAGC
CCCAGCCCAAGTCCGAACTCAGGCAAGAGTCTTGCTGCGCGCCGAAGGCGGTTGCGGCTTCTTGCTGCGATACTAATGCT
TCCTGCTGCGATGCCAAGCCCGCCGCTGAAACGGCCTCTTGTTGCAGCCCCAAGGTCGTAGTGCCCGAGGCCTCAAGCTG
TTGCGCTGCTTCATCTACATCCGCATCCACGGCTACATCGGCCGATACAGGCTGCTGTGGCAGCACGGAACAAGATGCTC
GCCCAGCGAACCAGCCCGCCTCTGTGATTGAGCGGATTTGGGATGGCCTTGTGTATGCCTCAACCGACCTGGTGCGCGAT
ACCGCCATCTGGCTGCTGATAGGTCTTTTCTTTGCCGCCTTGGTACAAACCTATGTACCGGCAGACTTTCTAGCGCAGTG
GGGCAACGGTATCCTCGCCATGTTGGTGATGGTGCTGGTGTCCATTCCCATGTATATCTGCGCTACAGCTTCGACCCCCA
TTGCCGCTGGTTTGCTGCTGGCCGGGGTGTCACCCGGCGCCGTACTGGTGTTTATGATGGCAGGCCCTGCCACCAATATC
GCCACGCTCGGAGTCGTAACCAAGGAGCTGGGTAAGCGGGCACTGTTTGGCTACCTCGGTGGTGTGCTTGGGGTGGCTTT
GGTGTTTGGCGTGCTGGTGAATTATCTGGTTGCCACTTTCGGCTTCGAAGTGGCGCCGCAGATTGGTGAAGAGCATGCCA
TGCTGCCCGACTGGTTGGTGGCCTCATCCGGGCTGCTGCTGGCTTTCCTGATGGGTCGGGTGCTGTGGCAAAAGCTGCCA
CGCAAACAAAAAACCGGCGGTTGCTGCAGCTAA

Upstream 100 bases:

>100_bases
GCGCATTGGCAAAGGCTTCCCAAGAAAAAAACTCCGGCGATAACGTATCCACAGAACACTCGCCCGCAGTTAACGCGGTA
AAGCCAAAGGGTCATGATTC

Downstream 100 bases:

>100_bases
GGTTCACCACACTGCATCAAAAGGCCCCGCACCGGCGGGGCCTTTTTGTTCGCCTTGATGCCATAAAGGCGGTGTTGAAC
TTGCTGTTGGTTATTGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: Permease Family

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MLLNNFLHLFLESAPWLLLGLFLAGMLKMFVPMAWMQKQLGGHGFKATVKAALLGAPLPLCSCGVIPAAVGLRRSGASKA
ATTSFLVSTPETGVDSVTVSYVLLGPFMAIVRPIAAVTSAIVAGLLVGRDEDTPDNASQSAETSSDKQSDKPITQAAKPA
MSFKPVAANSPLMTPTGAKLAAAPAVSFKPVAENTGRSCCSGNAEAEPKPESKPQPKSELRQESCCAPKAVAASCCDTNA
SCCDAKPAAETASCCSPKVVVPEASSCCAASSTSASTATSADTGCCGSTEQDARPANQPASVIERIWDGLVYASTDLVRD
TAIWLLIGLFFAALVQTYVPADFLAQWGNGILAMLVMVLVSIPMYICATASTPIAAGLLLAGVSPGAVLVFMMAGPATNI
ATLGVVTKELGKRALFGYLGGVLGVALVFGVLVNYLVATFGFEVAPQIGEEHAMLPDWLVASSGLLLAFLMGRVLWQKLP
RKQKTGGCCS

Sequences:

>Translated_490_residues
MLLNNFLHLFLESAPWLLLGLFLAGMLKMFVPMAWMQKQLGGHGFKATVKAALLGAPLPLCSCGVIPAAVGLRRSGASKA
ATTSFLVSTPETGVDSVTVSYVLLGPFMAIVRPIAAVTSAIVAGLLVGRDEDTPDNASQSAETSSDKQSDKPITQAAKPA
MSFKPVAANSPLMTPTGAKLAAAPAVSFKPVAENTGRSCCSGNAEAEPKPESKPQPKSELRQESCCAPKAVAASCCDTNA
SCCDAKPAAETASCCSPKVVVPEASSCCAASSTSASTATSADTGCCGSTEQDARPANQPASVIERIWDGLVYASTDLVRD
TAIWLLIGLFFAALVQTYVPADFLAQWGNGILAMLVMVLVSIPMYICATASTPIAAGLLLAGVSPGAVLVFMMAGPATNI
ATLGVVTKELGKRALFGYLGGVLGVALVFGVLVNYLVATFGFEVAPQIGEEHAMLPDWLVASSGLLLAFLMGRVLWQKLP
RKQKTGGCCS
>Mature_490_residues
MLLNNFLHLFLESAPWLLLGLFLAGMLKMFVPMAWMQKQLGGHGFKATVKAALLGAPLPLCSCGVIPAAVGLRRSGASKA
ATTSFLVSTPETGVDSVTVSYVLLGPFMAIVRPIAAVTSAIVAGLLVGRDEDTPDNASQSAETSSDKQSDKPITQAAKPA
MSFKPVAANSPLMTPTGAKLAAAPAVSFKPVAENTGRSCCSGNAEAEPKPESKPQPKSELRQESCCAPKAVAASCCDTNA
SCCDAKPAAETASCCSPKVVVPEASSCCAASSTSASTATSADTGCCGSTEQDARPANQPASVIERIWDGLVYASTDLVRD
TAIWLLIGLFFAALVQTYVPADFLAQWGNGILAMLVMVLVSIPMYICATASTPIAAGLLLAGVSPGAVLVFMMAGPATNI
ATLGVVTKELGKRALFGYLGGVLGVALVFGVLVNYLVATFGFEVAPQIGEEHAMLPDWLVASSGLLLAFLMGRVLWQKLP
RKQKTGGCCS

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50573; Mature: 50573

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLNNFLHLFLESAPWLLLGLFLAGMLKMFVPMAWMQKQLGGHGFKATVKAALLGAPLPL
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCH
CSCGVIPAAVGLRRSGASKAATTSFLVSTPETGVDSVTVSYVLLGPFMAIVRPIAAVTSA
HHCCHHHHHHHHHHCCCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IVAGLLVGRDEDTPDNASQSAETSSDKQSDKPITQAAKPAMSFKPVAANSPLMTPTGAKL
HHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCH
AAAPAVSFKPVAENTGRSCCSGNAEAEPKPESKPQPKSELRQESCCAPKAVAASCCDTNA
HHCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCC
SCCDAKPAAETASCCSPKVVVPEASSCCAASSTSASTATSADTGCCGSTEQDARPANQPA
CCCCCCCCHHHHHHCCCCEECCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
SVIERIWDGLVYASTDLVRDTAIWLLIGLFFAALVQTYVPADFLAQWGNGILAMLVMVLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHH
SIPMYICATASTPIAAGLLLAGVSPGAVLVFMMAGPATNIATLGVVTKELGKRALFGYLG
HHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
GVLGVALVFGVLVNYLVATFGFEVAPQIGEEHAMLPDWLVASSGLLLAFLMGRVLWQKLP
HHHHHHHHHHHHHHHHHHHHCCHHCHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCC
RKQKTGGCCS
CCCCCCCCCC
>Mature Secondary Structure
MLLNNFLHLFLESAPWLLLGLFLAGMLKMFVPMAWMQKQLGGHGFKATVKAALLGAPLPL
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCH
CSCGVIPAAVGLRRSGASKAATTSFLVSTPETGVDSVTVSYVLLGPFMAIVRPIAAVTSA
HHCCHHHHHHHHHHCCCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IVAGLLVGRDEDTPDNASQSAETSSDKQSDKPITQAAKPAMSFKPVAANSPLMTPTGAKL
HHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCH
AAAPAVSFKPVAENTGRSCCSGNAEAEPKPESKPQPKSELRQESCCAPKAVAASCCDTNA
HHCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCC
SCCDAKPAAETASCCSPKVVVPEASSCCAASSTSASTATSADTGCCGSTEQDARPANQPA
CCCCCCCCHHHHHHCCCCEECCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
SVIERIWDGLVYASTDLVRDTAIWLLIGLFFAALVQTYVPADFLAQWGNGILAMLVMVLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHH
SIPMYICATASTPIAAGLLLAGVSPGAVLVFMMAGPATNIATLGVVTKELGKRALFGYLG
HHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
GVLGVALVFGVLVNYLVATFGFEVAPQIGEEHAMLPDWLVASSGLLLAFLMGRVLWQKLP
HHHHHHHHHHHHHHHHHHHHCCHHCHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCC
RKQKTGGCCS
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA