| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119773439
Identifier: 119773439
GI number: 119773439
Start: 360831
End: 361814
Strand: Direct
Name: 119773439
Synonym: Sama_0298
Alternate gene names: NA
Gene position: 360831-361814 (Clockwise)
Preceding gene: 119773438
Following gene: 119773440
Centisome position: 8.38
GC content: 60.57
Gene sequence:
>984_bases ATGGCAGCCTGCGCGGCTGTTCACCATGACACACAGGCAACCCAGACAGGGGCAGCTTATGCCCCGGCAGAACAGGGGGG AGAGCCCCGGGAGTCGTCTGCTTCTGCGTACTTCTGGGTGGGTATTGATGCCGGTGGCAGCCATTGCCGGGCATTACTGA CAGACGATAGCGGCCAGGTGCTGGGCCACGGAGTTGCAGGACCTGCCAATCCGGTGAATGGTGTCAGCCAAAGTCAGGCG GCTATCATGTCTGCCATCGATAAGGCGCTGGGTGCGGCCAGGCTCGATAAGCAATATCACAGGCTGATTGTGGGTGCCGG TCTGGCGGGGCTGCACTTACCCAAGATGCAGCAGGTGATGAATGAATGGGCCCATCCCTTTGCTGCCTGGCATACCACCA CGGATCTGCATGTAGCGGCCCTGGGCGCCCATCAGGGCGCCGATGGCGGCGTGATTATTTTGGGCACAGGCTTCAGCTCT CTCGCCAACGTGAAGGGGCAGCAAATCCTCATCGGTGGCCATGGTTTCCCCATCAATGCCACCTGCAGCGGCTCCTGGTT TGGGCTCGAAGCGGTCAAGGCCGTATTGCTGGACGCCGATGGCATAGGGCCGGGCACCAGCCTGACCGGTAAGCTGTTGC AGGGGACGAACGCCATGGCCCTGGCGGAGCAACTGATGCACGCCAACGCCACCGACTTTGCCAGGTTTGCCCCACAGGTG TTTGAGCAGGCTGGTGCTGGTGATGCCGTGTCCCTCTCGCTGATTGAACAGGGCGCCACTTTTATCAATGGGGTCATTCG CCGCTTGCTGGCAACAGGCATCGACAGCTTGTCACTGGTGGGTGGTATCGCCCCCCTGATGCAACCCTGGCTCGCCCCTG ACTTATCCACCAGGATTCGCACCGCCAAGGCATCACCTGAAGAAGGTGCCATCCTCTTTGCCCGCCAATGTCATGTGGGC AATTCACGCATACAGGAGCGTTAA
Upstream 100 bases:
>100_bases ACTATTATTTGCAGCGTACCCTGGACTGGAGCCGCAAGCTCTCGGCCATCCCGGTTAATTCTTCGCAGCAGGAAGGCAGT CGATGATTGAAATGACCAGA
Downstream 100 bases:
>100_bases GCCATGGCCTCAAGAAGGGACTTTCTCAAACTCTCGTCGCTGGCATCCATGATAGGCCTGGCAGCGCCCGCCATGGCGCT GGGTCGTAAGGTGAATAAAC
Product: ATPase, BadF/BadG/BcrA/BcrD type
Products: NA
Alternate protein names: N-Acetylglucosamine Kinase; BadF/BadG/BcrA/BcrD ATPase Family Protein; N-Acetylglucosamine Kinase Protein; BadF/BadG/BcrA/BcrD Type ATPase; ATPase Badf/Badg/Bcra/Bcrd Type; Glucosamine Kinase; BadF/BadG/BcrA/BcrD ATPase Family Superfamily; Oxidoreductase; BadF/BadG/BcrA/BcrD ATPase; Glucosamine Kinase GpsK; BadF/BadG/BcrA/BcrD Family ATPase; Aryl-Alcohol Dehydrogenase
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MAACAAVHHDTQATQTGAAYAPAEQGGEPRESSASAYFWVGIDAGGSHCRALLTDDSGQVLGHGVAGPANPVNGVSQSQA AIMSAIDKALGAARLDKQYHRLIVGAGLAGLHLPKMQQVMNEWAHPFAAWHTTTDLHVAALGAHQGADGGVIILGTGFSS LANVKGQQILIGGHGFPINATCSGSWFGLEAVKAVLLDADGIGPGTSLTGKLLQGTNAMALAEQLMHANATDFARFAPQV FEQAGAGDAVSLSLIEQGATFINGVIRRLLATGIDSLSLVGGIAPLMQPWLAPDLSTRIRTAKASPEEGAILFARQCHVG NSRIQER
Sequences:
>Translated_327_residues MAACAAVHHDTQATQTGAAYAPAEQGGEPRESSASAYFWVGIDAGGSHCRALLTDDSGQVLGHGVAGPANPVNGVSQSQA AIMSAIDKALGAARLDKQYHRLIVGAGLAGLHLPKMQQVMNEWAHPFAAWHTTTDLHVAALGAHQGADGGVIILGTGFSS LANVKGQQILIGGHGFPINATCSGSWFGLEAVKAVLLDADGIGPGTSLTGKLLQGTNAMALAEQLMHANATDFARFAPQV FEQAGAGDAVSLSLIEQGATFINGVIRRLLATGIDSLSLVGGIAPLMQPWLAPDLSTRIRTAKASPEEGAILFARQCHVG NSRIQER >Mature_326_residues AACAAVHHDTQATQTGAAYAPAEQGGEPRESSASAYFWVGIDAGGSHCRALLTDDSGQVLGHGVAGPANPVNGVSQSQAA IMSAIDKALGAARLDKQYHRLIVGAGLAGLHLPKMQQVMNEWAHPFAAWHTTTDLHVAALGAHQGADGGVIILGTGFSSL ANVKGQQILIGGHGFPINATCSGSWFGLEAVKAVLLDADGIGPGTSLTGKLLQGTNAMALAEQLMHANATDFARFAPQVF EQAGAGDAVSLSLIEQGATFINGVIRRLLATGIDSLSLVGGIAPLMQPWLAPDLSTRIRTAKASPEEGAILFARQCHVGN SRIQER
Specific function: Unknown
COG id: COG2971
COG function: function code G; Predicted N-acetylglucosamine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33689; Mature: 33557
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAACAAVHHDTQATQTGAAYAPAEQGGEPRESSASAYFWVGIDAGGSHCRALLTDDSGQV CCCCHHHHCCCCHHCCCCCCCCHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCE LGHGVAGPANPVNGVSQSQAAIMSAIDKALGAARLDKQYHRLIVGAGLAGLHLPKMQQVM EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHH NEWAHPFAAWHTTTDLHVAALGAHQGADGGVIILGTGFSSLANVKGQQILIGGHGFPINA HHHCCHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCHHHHHCCCCCEEEECCCCCCEEE TCSGSWFGLEAVKAVLLDADGIGPGTSLTGKLLQGTNAMALAEQLMHANATDFARFAPQV ECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHH FEQAGAGDAVSLSLIEQGATFINGVIRRLLATGIDSLSLVGGIAPLMQPWLAPDLSTRIR HHHCCCCCEEEHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHH TAKASPEEGAILFARQCHVGNSRIQER HCCCCCCCCCEEEEEECCCCCHHHCCC >Mature Secondary Structure AACAAVHHDTQATQTGAAYAPAEQGGEPRESSASAYFWVGIDAGGSHCRALLTDDSGQV CCCHHHHCCCCHHCCCCCCCCHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCE LGHGVAGPANPVNGVSQSQAAIMSAIDKALGAARLDKQYHRLIVGAGLAGLHLPKMQQVM EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHH NEWAHPFAAWHTTTDLHVAALGAHQGADGGVIILGTGFSSLANVKGQQILIGGHGFPINA HHHCCHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCHHHHHCCCCCEEEECCCCCCEEE TCSGSWFGLEAVKAVLLDADGIGPGTSLTGKLLQGTNAMALAEQLMHANATDFARFAPQV ECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHH FEQAGAGDAVSLSLIEQGATFINGVIRRLLATGIDSLSLVGGIAPLMQPWLAPDLSTRIR HHHCCCCCEEEHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHH TAKASPEEGAILFARQCHVGNSRIQER HCCCCCCCCCEEEEEECCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA