Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773438

Identifier: 119773438

GI number: 119773438

Start: 359770

End: 360816

Strand: Direct

Name: 119773438

Synonym: Sama_0297

Alternate gene names: NA

Gene position: 359770-360816 (Clockwise)

Preceding gene: 119773437

Following gene: 119773439

Centisome position: 8.35

GC content: 53.2

Gene sequence:

>1047_bases
TTGGGCAACTCACGCCTTCATGTCTTCTACTATGGCTGGTACGGCAATCCGCAGCAGGATGGCCAGTGGCAACATTGGAA
CCACAGGGTATTGCCCTATGGTGATATCCCCCTCGAGGGGCGTTTGGATTTTCCCGGTGCTGATGACATAGGGGCCAACT
TTTACCCATCCCTTGGCAGTTACAGCTCCCACGATCCCGAGATTATCGAGCAGCATCTGGAGATGATGCGCCAGGCCGGC
ATAGGTGTGGTGTCGGTAAGCTGGCTGGGGGCCGACGATTTTGCTGCCAGGTCCATCGATTTCTTTATGGACAAAGCGGC
CGAAAAAGGACTGCAGATTAATTTTCATATTGAACCCAACTACCGCAGCGCCGAAGAGTTCCACGCCATTATTGCTGAAT
TAATGCGGAAATTTGGCACCCATCCCGCCTTGTACCGTTATCGGGGCAAACCCCTTTACTATGTATACGACTCCTACAAG
ATGCCGGTGAGTGAATGGCAAAAGCTGTTGCTGCCGGGAGGAGAGCTTAGCCTGAGAACTCCTGAACTCGATGGGCAATT
TATCGGTTTATGGGTAAATCAGGGCGAAGAAGCCTTTTTTCTCGATACCGGCTTCGATGGTTTTTACACCTACTTTGCCA
GCGAGGGCTTTGTGTGGGGCAGTACCAGTACCAACTGGCCTTACCTGGCTGGCTGGGCCAGTCGTCATGGCAAACTCTTT
ATTCCCAGTGTCGGCCCCGGCTATGCCGATGACAGAATTCGTCCCTGGAACGGTGCCAACTTCAAGGCCCGTGAGCAGGG
CCGTTATTACGACCGCATGTTCAGTCAGGCACTTAACACCAAGCCAGACATAGTAACCATTACCTCCTTCAATGAGTGGC
ACGAAGGCACCCAGATTGAGCCCGCCGTCGTGAAGCAACTGCCCGATTACCGCTATCTGGATTATGGCGACTTACCCGAA
GACTATTATTTGCAGCGTACCCTGGACTGGAGCCGCAAGCTCTCGGCCATCCCGGTTAATTCTTCGCAGCAGGAAGGCAG
TCGATGA

Upstream 100 bases:

>100_bases
GCAAAGCTGGAACACGACCTTGATACAGATTTACCGCATTCTATTGCTGGTGTTGCTCACCTGCTCGCTGCCGGGGTGCA
GCAAGGGACCATCCGAGCCT

Downstream 100 bases:

>100_bases
TTGAAATGACCAGAATGGCAGCCTGCGCGGCTGTTCACCATGACACACAGGCAACCCAGACAGGGGCAGCTTATGCCCCG
GCAGAACAGGGGGGAGAGCC

Product: endo-alpha-mannosidase

Products: NA

Alternate protein names: Glyco-Mannosidase; Secreted Glycosyl Hydrolase

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MGNSRLHVFYYGWYGNPQQDGQWQHWNHRVLPYGDIPLEGRLDFPGADDIGANFYPSLGSYSSHDPEIIEQHLEMMRQAG
IGVVSVSWLGADDFAARSIDFFMDKAAEKGLQINFHIEPNYRSAEEFHAIIAELMRKFGTHPALYRYRGKPLYYVYDSYK
MPVSEWQKLLLPGGELSLRTPELDGQFIGLWVNQGEEAFFLDTGFDGFYTYFASEGFVWGSTSTNWPYLAGWASRHGKLF
IPSVGPGYADDRIRPWNGANFKAREQGRYYDRMFSQALNTKPDIVTITSFNEWHEGTQIEPAVVKQLPDYRYLDYGDLPE
DYYLQRTLDWSRKLSAIPVNSSQQEGSR

Sequences:

>Translated_348_residues
MGNSRLHVFYYGWYGNPQQDGQWQHWNHRVLPYGDIPLEGRLDFPGADDIGANFYPSLGSYSSHDPEIIEQHLEMMRQAG
IGVVSVSWLGADDFAARSIDFFMDKAAEKGLQINFHIEPNYRSAEEFHAIIAELMRKFGTHPALYRYRGKPLYYVYDSYK
MPVSEWQKLLLPGGELSLRTPELDGQFIGLWVNQGEEAFFLDTGFDGFYTYFASEGFVWGSTSTNWPYLAGWASRHGKLF
IPSVGPGYADDRIRPWNGANFKAREQGRYYDRMFSQALNTKPDIVTITSFNEWHEGTQIEPAVVKQLPDYRYLDYGDLPE
DYYLQRTLDWSRKLSAIPVNSSQQEGSR
>Mature_347_residues
GNSRLHVFYYGWYGNPQQDGQWQHWNHRVLPYGDIPLEGRLDFPGADDIGANFYPSLGSYSSHDPEIIEQHLEMMRQAGI
GVVSVSWLGADDFAARSIDFFMDKAAEKGLQINFHIEPNYRSAEEFHAIIAELMRKFGTHPALYRYRGKPLYYVYDSYKM
PVSEWQKLLLPGGELSLRTPELDGQFIGLWVNQGEEAFFLDTGFDGFYTYFASEGFVWGSTSTNWPYLAGWASRHGKLFI
PSVGPGYADDRIRPWNGANFKAREQGRYYDRMFSQALNTKPDIVTITSFNEWHEGTQIEPAVVKQLPDYRYLDYGDLPED
YYLQRTLDWSRKLSAIPVNSSQQEGSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI41393556, Length=350, Percent_Identity=45.7142857142857, Blast_Score=304, Evalue=1e-82,
Organism=Homo sapiens, GI164698460, Length=345, Percent_Identity=43.1884057971014, Blast_Score=280, Evalue=2e-75,
Organism=Homo sapiens, GI22749033, Length=200, Percent_Identity=47, Blast_Score=187, Evalue=9e-48,
Organism=Homo sapiens, GI72534766, Length=127, Percent_Identity=40.9448818897638, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI19920762, Length=300, Percent_Identity=29.3333333333333, Blast_Score=120, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40124; Mature: 39993

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNSRLHVFYYGWYGNPQQDGQWQHWNHRVLPYGDIPLEGRLDFPGADDIGANFYPSLGS
CCCCEEEEEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCEECCCCCCCCCCCCCCCCCC
YSSHDPEIIEQHLEMMRQAGIGVVSVSWLGADDFAARSIDFFMDKAAEKGLQINFHIEPN
CCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCC
YRSAEEFHAIIAELMRKFGTHPALYRYRGKPLYYVYDSYKMPVSEWQKLLLPGGELSLRT
CCCHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEC
PELDGQFIGLWVNQGEEAFFLDTGFDGFYTYFASEGFVWGSTSTNWPYLAGWASRHGKLF
CCCCCEEEEEEEECCCEEEEEECCCCHHHHEECCCCEEECCCCCCCCEEEEHHCCCCEEE
IPSVGPGYADDRIRPWNGANFKAREQGRYYDRMFSQALNTKPDIVTITSFNEWHEGTQIE
ECCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCC
PAVVKQLPDYRYLDYGDLPEDYYLQRTLDWSRKLSAIPVNSSQQEGSR
HHHHHHCCCCCCCCCCCCCHHHHHHHHHCHHHCCEEECCCCCCCCCCC
>Mature Secondary Structure 
GNSRLHVFYYGWYGNPQQDGQWQHWNHRVLPYGDIPLEGRLDFPGADDIGANFYPSLGS
CCCEEEEEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCEECCCCCCCCCCCCCCCCCC
YSSHDPEIIEQHLEMMRQAGIGVVSVSWLGADDFAARSIDFFMDKAAEKGLQINFHIEPN
CCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCC
YRSAEEFHAIIAELMRKFGTHPALYRYRGKPLYYVYDSYKMPVSEWQKLLLPGGELSLRT
CCCHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEC
PELDGQFIGLWVNQGEEAFFLDTGFDGFYTYFASEGFVWGSTSTNWPYLAGWASRHGKLF
CCCCCEEEEEEEECCCEEEEEECCCCHHHHEECCCCEEECCCCCCCCEEEEHHCCCCEEE
IPSVGPGYADDRIRPWNGANFKAREQGRYYDRMFSQALNTKPDIVTITSFNEWHEGTQIE
ECCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCC
PAVVKQLPDYRYLDYGDLPEDYYLQRTLDWSRKLSAIPVNSSQQEGSR
HHHHHHCCCCCCCCCCCCCHHHHHHHHHCHHHCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA