Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773410

Identifier: 119773410

GI number: 119773410

Start: 308553

End: 309617

Strand: Direct

Name: 119773410

Synonym: Sama_0269

Alternate gene names: NA

Gene position: 308553-309617 (Clockwise)

Preceding gene: 119773409

Following gene: 119773411

Centisome position: 7.17

GC content: 55.96

Gene sequence:

>1065_bases
GTGATTGAAGTTATCCGGCAGCGGGTTCTGCCTCACTATGGATTGGAAGGCAATGCTGCAAAGGTTTCACCCCTGGGCAA
TGGGCACATCAATGATACGTTTTTGGTGACCTGGGATGAGGGCAGCATGGTGCTGCAGCGTCTCAATACCAGCGTGTTTC
AGGCCCCCTGGACCCTGGTGGAAAACGCCGAGCTTATCAGCCGCCACCTGGGCGAGAAAGAAGGGAAAGACTACGAGCTG
AAAGTGGTCAGCCCCAAAACTACCGCCGAAGGCGATTTGGGCATTGATCTGGGTGAGGCTGGTTTCTGGCGTGCCATTCG
TTATCTCAAGCATTCCAACAGCATAGATGTGGTTGGCAGCGAAGCTCAGGCAGAGCAGGCGGCCCGTGCCTTTGGGCATT
TTGCCCGCGCCCTGTGCGATTTCGATGCCACCCGGATTGGCGATGTGATCCCCAAGTTTCACTTCCTTCCGGGCCGCCTG
GCGGCGTTGGAGCAGGCGGCGGCCGACAACAAGGCGGGTCGCCTTGATACTTGTCGTGAGTGGGTCGACTTTGCCCTCTG
CCAGCGCGGCTTACTGGACGAACTGGCAGCACTTGAGCCAAAACTGCCGCTGCGAGTTTGTCATAACGACACCAAAATCA
ATAACATGCTTTTTGATAAGCGTGACGACTCTGCCATGGCCATCATCGACCTGGATACCTGCATGAAGGGCCATCTGATG
TATGACTTTGGCGACATGGTACGCACCTTCACGTCACCCGAAGCGGAAGACAGCACGGCGCTGGACAAGGTGCGGGTGCG
GCCGGAGATCTTTGCCGCCATTTGTCGCGGTTATCTGGCTGAGCTGGGGGATGTACTGGAAGCGGCAGAGCGTGAAAGCC
TGTGGCTGGGTGCCCGCATTATGTGCCTGATGATTGGCGTCCGTTTTTTAACGGATTATCTGAACGGCGACCTCTATTTT
CATGTGCACCGCGAGGGTCATAACCTCGACCGCGCAGCCAATCAGTTCACCCTGTATCAAAGCTTACTGACTCAGGCAGA
CCGTCTTAAACCCTGCATTTTTTGA

Upstream 100 bases:

>100_bases
GGACTCAAGGTTCGGGTAGAAACCGCCCAGGGGGAATGGCTCGGGGTTACCTACGCAGATGATGTGCCCCGGGTAAGATC
AAGATTGATGGAGTTATTGA

Downstream 100 bases:

>100_bases
GTGACAGCACCGCCCATTTGCTAACACAAAGGGCGGTGTTTTCCTGTCTGGATAGCGGACTTATCACAAGAGAGCCAAGC
CTATGACCTGGAATATCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Mucin-Desulfating Sulfatase; Phosphotransferase Family; Homoserine/Choline Kinase Family Protein; Desulfatase Possibly For Mucin; N-Acetylhexosamine-1-Kinase NahK; Desulfatase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Phosphotransferase

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MIEVIRQRVLPHYGLEGNAAKVSPLGNGHINDTFLVTWDEGSMVLQRLNTSVFQAPWTLVENAELISRHLGEKEGKDYEL
KVVSPKTTAEGDLGIDLGEAGFWRAIRYLKHSNSIDVVGSEAQAEQAARAFGHFARALCDFDATRIGDVIPKFHFLPGRL
AALEQAAADNKAGRLDTCREWVDFALCQRGLLDELAALEPKLPLRVCHNDTKINNMLFDKRDDSAMAIIDLDTCMKGHLM
YDFGDMVRTFTSPEAEDSTALDKVRVRPEIFAAICRGYLAELGDVLEAAERESLWLGARIMCLMIGVRFLTDYLNGDLYF
HVHREGHNLDRAANQFTLYQSLLTQADRLKPCIF

Sequences:

>Translated_354_residues
MIEVIRQRVLPHYGLEGNAAKVSPLGNGHINDTFLVTWDEGSMVLQRLNTSVFQAPWTLVENAELISRHLGEKEGKDYEL
KVVSPKTTAEGDLGIDLGEAGFWRAIRYLKHSNSIDVVGSEAQAEQAARAFGHFARALCDFDATRIGDVIPKFHFLPGRL
AALEQAAADNKAGRLDTCREWVDFALCQRGLLDELAALEPKLPLRVCHNDTKINNMLFDKRDDSAMAIIDLDTCMKGHLM
YDFGDMVRTFTSPEAEDSTALDKVRVRPEIFAAICRGYLAELGDVLEAAERESLWLGARIMCLMIGVRFLTDYLNGDLYF
HVHREGHNLDRAANQFTLYQSLLTQADRLKPCIF
>Mature_354_residues
MIEVIRQRVLPHYGLEGNAAKVSPLGNGHINDTFLVTWDEGSMVLQRLNTSVFQAPWTLVENAELISRHLGEKEGKDYEL
KVVSPKTTAEGDLGIDLGEAGFWRAIRYLKHSNSIDVVGSEAQAEQAARAFGHFARALCDFDATRIGDVIPKFHFLPGRL
AALEQAAADNKAGRLDTCREWVDFALCQRGLLDELAALEPKLPLRVCHNDTKINNMLFDKRDDSAMAIIDLDTCMKGHLM
YDFGDMVRTFTSPEAEDSTALDKVRVRPEIFAAICRGYLAELGDVLEAAERESLWLGARIMCLMIGVRFLTDYLNGDLYF
HVHREGHNLDRAANQFTLYQSLLTQADRLKPCIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39703; Mature: 39703

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVIRQRVLPHYGLEGNAAKVSPLGNGHINDTFLVTWDEGSMVLQRLNTSVFQAPWTLV
CHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHH
ENAELISRHLGEKEGKDYELKVVSPKTTAEGDLGIDLGEAGFWRAIRYLKHSNSIDVVGS
HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECC
EAQAEQAARAFGHFARALCDFDATRIGDVIPKFHFLPGRLAALEQAAADNKAGRLDTCRE
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHH
WVDFALCQRGLLDELAALEPKLPLRVCHNDTKINNMLFDKRDDSAMAIIDLDTCMKGHLM
HHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHCCCCCCCEEEEEEHHHHHCCCEE
YDFGDMVRTFTSPEAEDSTALDKVRVRPEIFAAICRGYLAELGDVLEAAERESLWLGARI
EHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MCLMIGVRFLTDYLNGDLYFHVHREGHNLDRAANQFTLYQSLLTQADRLKPCIF
HHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIEVIRQRVLPHYGLEGNAAKVSPLGNGHINDTFLVTWDEGSMVLQRLNTSVFQAPWTLV
CHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHH
ENAELISRHLGEKEGKDYELKVVSPKTTAEGDLGIDLGEAGFWRAIRYLKHSNSIDVVGS
HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECC
EAQAEQAARAFGHFARALCDFDATRIGDVIPKFHFLPGRLAALEQAAADNKAGRLDTCRE
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHH
WVDFALCQRGLLDELAALEPKLPLRVCHNDTKINNMLFDKRDDSAMAIIDLDTCMKGHLM
HHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHCCCCCCCEEEEEEHHHHHCCCEE
YDFGDMVRTFTSPEAEDSTALDKVRVRPEIFAAICRGYLAELGDVLEAAERESLWLGARI
EHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MCLMIGVRFLTDYLNGDLYFHVHREGHNLDRAANQFTLYQSLLTQADRLKPCIF
HHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA