| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119773410
Identifier: 119773410
GI number: 119773410
Start: 308553
End: 309617
Strand: Direct
Name: 119773410
Synonym: Sama_0269
Alternate gene names: NA
Gene position: 308553-309617 (Clockwise)
Preceding gene: 119773409
Following gene: 119773411
Centisome position: 7.17
GC content: 55.96
Gene sequence:
>1065_bases GTGATTGAAGTTATCCGGCAGCGGGTTCTGCCTCACTATGGATTGGAAGGCAATGCTGCAAAGGTTTCACCCCTGGGCAA TGGGCACATCAATGATACGTTTTTGGTGACCTGGGATGAGGGCAGCATGGTGCTGCAGCGTCTCAATACCAGCGTGTTTC AGGCCCCCTGGACCCTGGTGGAAAACGCCGAGCTTATCAGCCGCCACCTGGGCGAGAAAGAAGGGAAAGACTACGAGCTG AAAGTGGTCAGCCCCAAAACTACCGCCGAAGGCGATTTGGGCATTGATCTGGGTGAGGCTGGTTTCTGGCGTGCCATTCG TTATCTCAAGCATTCCAACAGCATAGATGTGGTTGGCAGCGAAGCTCAGGCAGAGCAGGCGGCCCGTGCCTTTGGGCATT TTGCCCGCGCCCTGTGCGATTTCGATGCCACCCGGATTGGCGATGTGATCCCCAAGTTTCACTTCCTTCCGGGCCGCCTG GCGGCGTTGGAGCAGGCGGCGGCCGACAACAAGGCGGGTCGCCTTGATACTTGTCGTGAGTGGGTCGACTTTGCCCTCTG CCAGCGCGGCTTACTGGACGAACTGGCAGCACTTGAGCCAAAACTGCCGCTGCGAGTTTGTCATAACGACACCAAAATCA ATAACATGCTTTTTGATAAGCGTGACGACTCTGCCATGGCCATCATCGACCTGGATACCTGCATGAAGGGCCATCTGATG TATGACTTTGGCGACATGGTACGCACCTTCACGTCACCCGAAGCGGAAGACAGCACGGCGCTGGACAAGGTGCGGGTGCG GCCGGAGATCTTTGCCGCCATTTGTCGCGGTTATCTGGCTGAGCTGGGGGATGTACTGGAAGCGGCAGAGCGTGAAAGCC TGTGGCTGGGTGCCCGCATTATGTGCCTGATGATTGGCGTCCGTTTTTTAACGGATTATCTGAACGGCGACCTCTATTTT CATGTGCACCGCGAGGGTCATAACCTCGACCGCGCAGCCAATCAGTTCACCCTGTATCAAAGCTTACTGACTCAGGCAGA CCGTCTTAAACCCTGCATTTTTTGA
Upstream 100 bases:
>100_bases GGACTCAAGGTTCGGGTAGAAACCGCCCAGGGGGAATGGCTCGGGGTTACCTACGCAGATGATGTGCCCCGGGTAAGATC AAGATTGATGGAGTTATTGA
Downstream 100 bases:
>100_bases GTGACAGCACCGCCCATTTGCTAACACAAAGGGCGGTGTTTTCCTGTCTGGATAGCGGACTTATCACAAGAGAGCCAAGC CTATGACCTGGAATATCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Mucin-Desulfating Sulfatase; Phosphotransferase Family; Homoserine/Choline Kinase Family Protein; Desulfatase Possibly For Mucin; N-Acetylhexosamine-1-Kinase NahK; Desulfatase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Phosphotransferase
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MIEVIRQRVLPHYGLEGNAAKVSPLGNGHINDTFLVTWDEGSMVLQRLNTSVFQAPWTLVENAELISRHLGEKEGKDYEL KVVSPKTTAEGDLGIDLGEAGFWRAIRYLKHSNSIDVVGSEAQAEQAARAFGHFARALCDFDATRIGDVIPKFHFLPGRL AALEQAAADNKAGRLDTCREWVDFALCQRGLLDELAALEPKLPLRVCHNDTKINNMLFDKRDDSAMAIIDLDTCMKGHLM YDFGDMVRTFTSPEAEDSTALDKVRVRPEIFAAICRGYLAELGDVLEAAERESLWLGARIMCLMIGVRFLTDYLNGDLYF HVHREGHNLDRAANQFTLYQSLLTQADRLKPCIF
Sequences:
>Translated_354_residues MIEVIRQRVLPHYGLEGNAAKVSPLGNGHINDTFLVTWDEGSMVLQRLNTSVFQAPWTLVENAELISRHLGEKEGKDYEL KVVSPKTTAEGDLGIDLGEAGFWRAIRYLKHSNSIDVVGSEAQAEQAARAFGHFARALCDFDATRIGDVIPKFHFLPGRL AALEQAAADNKAGRLDTCREWVDFALCQRGLLDELAALEPKLPLRVCHNDTKINNMLFDKRDDSAMAIIDLDTCMKGHLM YDFGDMVRTFTSPEAEDSTALDKVRVRPEIFAAICRGYLAELGDVLEAAERESLWLGARIMCLMIGVRFLTDYLNGDLYF HVHREGHNLDRAANQFTLYQSLLTQADRLKPCIF >Mature_354_residues MIEVIRQRVLPHYGLEGNAAKVSPLGNGHINDTFLVTWDEGSMVLQRLNTSVFQAPWTLVENAELISRHLGEKEGKDYEL KVVSPKTTAEGDLGIDLGEAGFWRAIRYLKHSNSIDVVGSEAQAEQAARAFGHFARALCDFDATRIGDVIPKFHFLPGRL AALEQAAADNKAGRLDTCREWVDFALCQRGLLDELAALEPKLPLRVCHNDTKINNMLFDKRDDSAMAIIDLDTCMKGHLM YDFGDMVRTFTSPEAEDSTALDKVRVRPEIFAAICRGYLAELGDVLEAAERESLWLGARIMCLMIGVRFLTDYLNGDLYF HVHREGHNLDRAANQFTLYQSLLTQADRLKPCIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39703; Mature: 39703
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEVIRQRVLPHYGLEGNAAKVSPLGNGHINDTFLVTWDEGSMVLQRLNTSVFQAPWTLV CHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHH ENAELISRHLGEKEGKDYELKVVSPKTTAEGDLGIDLGEAGFWRAIRYLKHSNSIDVVGS HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECC EAQAEQAARAFGHFARALCDFDATRIGDVIPKFHFLPGRLAALEQAAADNKAGRLDTCRE HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHH WVDFALCQRGLLDELAALEPKLPLRVCHNDTKINNMLFDKRDDSAMAIIDLDTCMKGHLM HHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHCCCCCCCEEEEEEHHHHHCCCEE YDFGDMVRTFTSPEAEDSTALDKVRVRPEIFAAICRGYLAELGDVLEAAERESLWLGARI EHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MCLMIGVRFLTDYLNGDLYFHVHREGHNLDRAANQFTLYQSLLTQADRLKPCIF HHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIEVIRQRVLPHYGLEGNAAKVSPLGNGHINDTFLVTWDEGSMVLQRLNTSVFQAPWTLV CHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHH ENAELISRHLGEKEGKDYELKVVSPKTTAEGDLGIDLGEAGFWRAIRYLKHSNSIDVVGS HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECC EAQAEQAARAFGHFARALCDFDATRIGDVIPKFHFLPGRLAALEQAAADNKAGRLDTCRE HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHH WVDFALCQRGLLDELAALEPKLPLRVCHNDTKINNMLFDKRDDSAMAIIDLDTCMKGHLM HHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHCCCCCCCEEEEEEHHHHHCCCEE YDFGDMVRTFTSPEAEDSTALDKVRVRPEIFAAICRGYLAELGDVLEAAERESLWLGARI EHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MCLMIGVRFLTDYLNGDLYFHVHREGHNLDRAANQFTLYQSLLTQADRLKPCIF HHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA