Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

Click here to switch to the map view.

The map label for this gene is lgt [H]

Identifier: 119773411

GI number: 119773411

Start: 309700

End: 310467

Strand: Direct

Name: lgt [H]

Synonym: Sama_0270

Alternate gene names: 119773411

Gene position: 309700-310467 (Clockwise)

Preceding gene: 119773410

Following gene: 119773412

Centisome position: 7.19

GC content: 56.77

Gene sequence:

>768_bases
ATGACCTGGAATATCGACCCCATACTGTTTCAATTTGGCGGCATCAGTCTGCACTGGTACGGGCTGCTGTTTGCCTGTGG
TATCTGGGGCGGTGCAGCCCTGCTCAAGCAGATGCTGAAAGAATCCGGGCAAAACGCAGGCCTGGTGGATGAGCTCTTTT
TCCCGGTGTTTATTGGCATCATAGTGGGTGCCCGACTGATGCACTGCCTGGCCTATGAGCCCGACTTCTATCTCGCCCAT
CCCATGGAAATTCTCTATATCTGGAAGGGCGGCCTCGCCAGCCACGGCGGCGGTCTGGGTGCCATTTTGGGTGTGCTCTG
GGTCGCCAGACGCAACAAGCTTAGCCTGATGTACTTGCTGGATTATCTGGCGCTGCCGACACTGGTGTTTGCCGTGTGTG
TACGTCTGGCCAACCTGATGAATTCTGAGATTTACGGCAAGGTAACCGACGGCCCCTGGGGGGTGATTTTTGCCCGGGTC
GACATGCTGCCAAGACATCCGGCGCAGCTGTATGAGGCCATAGGCTATCTGCTGCTGGGGCTGCTGCTGTGGCAACTGCG
CCGCAGTATGCTGGCTATGCAAGGGCGTTTGTTTGGCGCATTTCTGATAGGTGTGTTCGTTATCCGCATGCTGGTGGAAT
GGGTTAAACCCGAGCAGGCAAGCTACATTCCCTCGCTGCCCTTAACCGTTGGTCAGCTGCTCAGTGTGCCCTTTATTCTG
GTGGGTATCTGGTTGTGGCTGCGCTCCCGTGCTGCGAAGAGCCGCTGA

Upstream 100 bases:

>100_bases
AAACCCTGCATTTTTTGAGTGACAGCACCGCCCATTTGCTAACACAAAGGGCGGTGTTTTCCTGTCTGGATAGCGGACTT
ATCACAAGAGAGCCAAGCCT

Downstream 100 bases:

>100_bases
AAATCAGCCTGAAATAGACCGCCAGTGACCCAGGGCGGCGGGCGTTAAAGTGGTTTTTCCTGATTGGCCAATTGCTCTTG
CCGATGCAGTTGGCCATAAT

Product: prolipoprotein diacylglyceryl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MTWNIDPILFQFGGISLHWYGLLFACGIWGGAALLKQMLKESGQNAGLVDELFFPVFIGIIVGARLMHCLAYEPDFYLAH
PMEILYIWKGGLASHGGGLGAILGVLWVARRNKLSLMYLLDYLALPTLVFAVCVRLANLMNSEIYGKVTDGPWGVIFARV
DMLPRHPAQLYEAIGYLLLGLLLWQLRRSMLAMQGRLFGAFLIGVFVIRMLVEWVKPEQASYIPSLPLTVGQLLSVPFIL
VGIWLWLRSRAAKSR

Sequences:

>Translated_255_residues
MTWNIDPILFQFGGISLHWYGLLFACGIWGGAALLKQMLKESGQNAGLVDELFFPVFIGIIVGARLMHCLAYEPDFYLAH
PMEILYIWKGGLASHGGGLGAILGVLWVARRNKLSLMYLLDYLALPTLVFAVCVRLANLMNSEIYGKVTDGPWGVIFARV
DMLPRHPAQLYEAIGYLLLGLLLWQLRRSMLAMQGRLFGAFLIGVFVIRMLVEWVKPEQASYIPSLPLTVGQLLSVPFIL
VGIWLWLRSRAAKSR
>Mature_254_residues
TWNIDPILFQFGGISLHWYGLLFACGIWGGAALLKQMLKESGQNAGLVDELFFPVFIGIIVGARLMHCLAYEPDFYLAHP
MEILYIWKGGLASHGGGLGAILGVLWVARRNKLSLMYLLDYLALPTLVFAVCVRLANLMNSEIYGKVTDGPWGVIFARVD
MLPRHPAQLYEAIGYLLLGLLLWQLRRSMLAMQGRLFGAFLIGVFVIRMLVEWVKPEQASYIPSLPLTVGQLLSVPFILV
GIWLWLRSRAAKSR

Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]

COG id: COG0682

COG function: function code M; Prolipoprotein diacylglyceryltransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lgt family [H]

Homologues:

Organism=Escherichia coli, GI1789192, Length=281, Percent_Identity=30.6049822064057, Blast_Score=121, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001640 [H]

Pfam domain/function: PF01790 LGT [H]

EC number: 2.4.99.- [C]

Molecular weight: Translated: 28567; Mature: 28436

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWNIDPILFQFGGISLHWYGLLFACGIWGGAALLKQMLKESGQNAGLVDELFFPVFIGI
CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
IVGARLMHCLAYEPDFYLAHPMEILYIWKGGLASHGGGLGAILGVLWVARRNKLSLMYLL
HHHHHHHHHHHCCCCCEEECHHHEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH
DYLALPTLVFAVCVRLANLMNSEIYGKVTDGPWGVIFARVDMLPRHPAQLYEAIGYLLLG
HHHHHHHHHHHHHHHHHHHHCHHHCEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LLLWQLRRSMLAMQGRLFGAFLIGVFVIRMLVEWVKPEQASYIPSLPLTVGQLLSVPFIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHH
VGIWLWLRSRAAKSR
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
TWNIDPILFQFGGISLHWYGLLFACGIWGGAALLKQMLKESGQNAGLVDELFFPVFIGI
CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
IVGARLMHCLAYEPDFYLAHPMEILYIWKGGLASHGGGLGAILGVLWVARRNKLSLMYLL
HHHHHHHHHHHCCCCCEEECHHHEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH
DYLALPTLVFAVCVRLANLMNSEIYGKVTDGPWGVIFARVDMLPRHPAQLYEAIGYLLLG
HHHHHHHHHHHHHHHHHHHHCHHHCEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LLLWQLRRSMLAMQGRLFGAFLIGVFVIRMLVEWVKPEQASYIPSLPLTVGQLLSVPFIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHH
VGIWLWLRSRAAKSR
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA