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The map label for this gene is smf [C]

Identifier: 119717470

GI number: 119717470

Start: 3447925

End: 3449061

Strand: Reverse

Name: smf [C]

Synonym: Noca_3246

Alternate gene names: 119717470

Gene position: 3449061-3447925 (Counterclockwise)

Preceding gene: 119717471

Following gene: 119717469

Centisome position: 69.18

GC content: 76.69

Gene sequence:

>1137_bases
ATGAGCGCGTCCGAGGAGGACCGCCTGCTTCGGGTCGCGCTGTCGGCGCTCGGTGAGCCCGGCGACCCCCGGCTCCTGGA
CTGGGTCACCCGGCTCGGGCCAGCCGCGGTCCACGAGCTGCTGCTGACCGGGCACACGCTCGAGGAGCTCCAGACCGATC
CCGACGCGCGCCGCGCGGCCGAGGACCCGCAGCGGACCCTGGCCCGGGCAGCCGACCGAGGCCTGCGCTTCGTCGTCCCG
GGAGACGAGGAGTGGCCGACCCAGCTCGACGACCTGGCCACGGCCGCTCCACTGCAGAACCGCGGCGGCGCCCCACTCGG
CCTGTGGGTGCGCGGCCCGGCCCGGCTCGACGACCTCGCCGGGTCCGTCGCCGTCGTCGGGTCCCGGTCCGCCACGACCT
ACGGCGCCGAGGTCGCCACCGACCTCGCGGCTGCGATCGCGGCCGTCGACCGCGCCGTCGTCTCCGGTGCCGCCTACGGG
ATCGACCAGGCCGCGCACCGCGGGGCGCTCGTCGGCGGCGGGTCGACGGTGGCGGTGCTCGCGTGCGGCGCCGACCGGTG
CTATCCCGCCGCACACCGAGAGCTGATCGAATACATCGCCGGCCACGGTGCGGTCGTGTCCGAGGCGCTGCCGGGCTGGT
CGCCGACCCAGCTCCGGTTCCTCGCGCGCAACCGGCTGATCGCCGCGCTGAGCGTCGGCACCGTGGTCGTGGAGGCCGCG
GCGCGCAGCGGCGCGCTCAACACGGCGAACTGGGCCACCCGCCTCAACCGGCACGTGCTCGGCGTGCCCGGGCCGGTGAC
CAGCGCGCCGTCGGAGGGCGTGCACCACCTGATCCGCTCCCAGGCCGCCGTCCTGGTGACCTCGGGCGCGGACGTGCTCG
AGGTGGTCAGTGCCACGGGCCAGCACCTCGCCGCCGAGCCGCGCGGCCCGGTCCGGTCCCGCGACCGACTCACCACCCGC
CAGCGGCAGGTGCTCGACGCGGTGCCGGTGGCCCAAGCGGCCCCCGAGACATCGATCGCCCGCACCGCCGGCCTCGGTCT
CACCGAAGCCCGCAAGGTGCTCGTCGCGCTCGCCGAGCGCGGCCTCGCCGAGCAGGTCCCGGGCGGTTGGCGGCTCGCCG
CACTGGCTCACCAGTAG

Upstream 100 bases:

>100_bases
ACCTGCGACACCTCGACCAGCCCGGTCTCGACGAGGTCGACACCGCGCTGCGCCTCCGCACCGGCGACCTCCTGCTGCTG
TCGATGCTGGAGCGGGTCGG

Downstream 100 bases:

>100_bases
CGCCCGGCCTCCTTCCTAGACTCGGGGCGTGAGCGAGGAGGAGCAGTCGGCGCGGCTTCCCGAGGCGATGGCCCGGGCGC
TCGGCGACTACGAGCGTCAC

Product: DNA protecting protein DprA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MSASEEDRLLRVALSALGEPGDPRLLDWVTRLGPAAVHELLLTGHTLEELQTDPDARRAAEDPQRTLARAADRGLRFVVP
GDEEWPTQLDDLATAAPLQNRGGAPLGLWVRGPARLDDLAGSVAVVGSRSATTYGAEVATDLAAAIAAVDRAVVSGAAYG
IDQAAHRGALVGGGSTVAVLACGADRCYPAAHRELIEYIAGHGAVVSEALPGWSPTQLRFLARNRLIAALSVGTVVVEAA
ARSGALNTANWATRLNRHVLGVPGPVTSAPSEGVHHLIRSQAAVLVTSGADVLEVVSATGQHLAAEPRGPVRSRDRLTTR
QRQVLDAVPVAQAAPETSIARTAGLGLTEARKVLVALAERGLAEQVPGGWRLAALAHQ

Sequences:

>Translated_378_residues
MSASEEDRLLRVALSALGEPGDPRLLDWVTRLGPAAVHELLLTGHTLEELQTDPDARRAAEDPQRTLARAADRGLRFVVP
GDEEWPTQLDDLATAAPLQNRGGAPLGLWVRGPARLDDLAGSVAVVGSRSATTYGAEVATDLAAAIAAVDRAVVSGAAYG
IDQAAHRGALVGGGSTVAVLACGADRCYPAAHRELIEYIAGHGAVVSEALPGWSPTQLRFLARNRLIAALSVGTVVVEAA
ARSGALNTANWATRLNRHVLGVPGPVTSAPSEGVHHLIRSQAAVLVTSGADVLEVVSATGQHLAAEPRGPVRSRDRLTTR
QRQVLDAVPVAQAAPETSIARTAGLGLTEARKVLVALAERGLAEQVPGGWRLAALAHQ
>Mature_377_residues
SASEEDRLLRVALSALGEPGDPRLLDWVTRLGPAAVHELLLTGHTLEELQTDPDARRAAEDPQRTLARAADRGLRFVVPG
DEEWPTQLDDLATAAPLQNRGGAPLGLWVRGPARLDDLAGSVAVVGSRSATTYGAEVATDLAAAIAAVDRAVVSGAAYGI
DQAAHRGALVGGGSTVAVLACGADRCYPAAHRELIEYIAGHGAVVSEALPGWSPTQLRFLARNRLIAALSVGTVVVEAAA
RSGALNTANWATRLNRHVLGVPGPVTSAPSEGVHHLIRSQAAVLVTSGADVLEVVSATGQHLAAEPRGPVRSRDRLTTRQ
RQVLDAVPVAQAAPETSIARTAGLGLTEARKVLVALAERGLAEQVPGGWRLAALAHQ

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994932, Length=359, Percent_Identity=32.3119777158774, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 39263; Mature: 39132

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS00398 RECOMBINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASEEDRLLRVALSALGEPGDPRLLDWVTRLGPAAVHELLLTGHTLEELQTDPDARRAA
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHCCCCHHHHCCCCHHHHHH
EDPQRTLARAADRGLRFVVPGDEEWPTQLDDLATAAPLQNRGGAPLGLWVRGPARLDDLA
CCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHC
GSVAVVGSRSATTYGAEVATDLAAAIAAVDRAVVSGAAYGIDQAAHRGALVGGGSTVAVL
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEE
ACGADRCYPAAHRELIEYIAGHGAVVSEALPGWSPTQLRFLARNRLIAALSVGTVVVEAA
EECCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ARSGALNTANWATRLNRHVLGVPGPVTSAPSEGVHHLIRSQAAVLVTSGADVLEVVSATG
HHCCCCCCHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHCC
QHLAAEPRGPVRSRDRLTTRQRQVLDAVPVAQAAPETSIARTAGLGLTEARKVLVALAER
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHC
GLAEQVPGGWRLAALAHQ
CHHHHCCCCEEEEEECCC
>Mature Secondary Structure 
SASEEDRLLRVALSALGEPGDPRLLDWVTRLGPAAVHELLLTGHTLEELQTDPDARRAA
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHCCCCHHHHCCCCHHHHHH
EDPQRTLARAADRGLRFVVPGDEEWPTQLDDLATAAPLQNRGGAPLGLWVRGPARLDDLA
CCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHC
GSVAVVGSRSATTYGAEVATDLAAAIAAVDRAVVSGAAYGIDQAAHRGALVGGGSTVAVL
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEE
ACGADRCYPAAHRELIEYIAGHGAVVSEALPGWSPTQLRFLARNRLIAALSVGTVVVEAA
EECCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ARSGALNTANWATRLNRHVLGVPGPVTSAPSEGVHHLIRSQAAVLVTSGADVLEVVSATG
HHCCCCCCHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHCC
QHLAAEPRGPVRSRDRLTTRQRQVLDAVPVAQAAPETSIARTAGLGLTEARKVLVALAER
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHC
GLAEQVPGGWRLAALAHQ
CHHHHCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]