Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119717410

Identifier: 119717410

GI number: 119717410

Start: 3385080

End: 3386054

Strand: Reverse

Name: 119717410

Synonym: Noca_3186

Alternate gene names: NA

Gene position: 3386054-3385080 (Counterclockwise)

Preceding gene: 119717411

Following gene: 119717405

Centisome position: 67.91

GC content: 72.82

Gene sequence:

>975_bases
GTGACCGTCCCCCCGCCCCCGGAGCCGATCGCGGCCGCGGACGCGTGGTTCCTCCAGCACGGGCTGTCCTACTTCGTGCC
CGAGCGCCGCGCGGACGTGCGCAACGCGCTCCGGCTGCGCCGGACCGTGCCGCTGCTGCTCCTCGTCGCCCTGCTGGCGG
CGGCGGCCGGGGCGGCGCTCGCGTGGGTCTCGGGGCAGTTCAGCGCGGCCCCGGCGACGCTGGTGTCGCTGGGGCTGGCC
GCGGCCGTCTGGTACGCCCTGACCGCGCTGCACGCCCGCCAGATCGTCGCCTGGGGCCTCAAGCGCACCTTCGGGGGCCT
GCGCCGGCTGCTGCCGATGACGACCCGCGCGCTGCCCCTGCTGCTGCTCGCGATCACGTTCCTGTTCATCAACACCGAGA
TGTGGCAGGTCGGTGGCAACCTCAGCGTCGGCTCGCTGTGGCTGGTGGTCCTGCTCTTCGCGCTCCTCGCGGTCGCGTTC
CTCCTCGTGCGCCTGCCCGAGGAGGTGGACCGCGCCGACGACGCGGTCGACGACGCGCTGCTGCTGCGGGCCTGCGCCGG
CTCGCCGCTGGAGGAGACCTGCCGGGAGCTGGTCGAGGACCCGGACGCCGATCCCGCGGCGTACGCCGAGGTCACCGGCT
TCGAACGCTGGAACCTGATCCTGGTGCTGATGGTCGTCCAGGTCGTGCAGGTGCTGCTGCTGTCGCTGGCGGTGTTCGCG
TTCCTGATGGTCTTCGGCGGCCTGATCATGACCGGCCCGGTGATCGAGGCCTGGCAGGCCGGGGACGACTTCAGCGAGTC
CCGGGCACTGGTCCAGGTGTCGGTCTTCCTGGCGGCGTTCTCCGGGCTCTACCTGACGGTCTCCACGGTCACCGACGAGA
CCTACCGCGCCCAGTTCTTCTCCGGGGTCACCCGCGAGCTGGAGCGCGCGGTCGGCATGCGCGCGGTCTACCTGGCGCTG
CGCGAGCGGTCCTGA

Upstream 100 bases:

>100_bases
GCTTCGTCGACCGGCTGCGCGGCATGGTCGCCTTCGAGTCGATCGACAAGCTCGTGGCCCAGATGAACGACGACGTCGAC
CGCGCCCGAGAGCTGCTGGC

Downstream 100 bases:

>100_bases
CCCCTACGCGTCGAGGTCCTGCTCGACGAGGGCGGCGATCGTGTCGAGAGCGGCCTGGTCGTCGCTGGACACCTCGACCT
GGTCACCGGGTCCGGCCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MTVPPPPEPIAAADAWFLQHGLSYFVPERRADVRNALRLRRTVPLLLLVALLAAAAGAALAWVSGQFSAAPATLVSLGLA
AAVWYALTALHARQIVAWGLKRTFGGLRRLLPMTTRALPLLLLAITFLFINTEMWQVGGNLSVGSLWLVVLLFALLAVAF
LLVRLPEEVDRADDAVDDALLLRACAGSPLEETCRELVEDPDADPAAYAEVTGFERWNLILVLMVVQVVQVLLLSLAVFA
FLMVFGGLIMTGPVIEAWQAGDDFSESRALVQVSVFLAAFSGLYLTVSTVTDETYRAQFFSGVTRELERAVGMRAVYLAL
RERS

Sequences:

>Translated_324_residues
MTVPPPPEPIAAADAWFLQHGLSYFVPERRADVRNALRLRRTVPLLLLVALLAAAAGAALAWVSGQFSAAPATLVSLGLA
AAVWYALTALHARQIVAWGLKRTFGGLRRLLPMTTRALPLLLLAITFLFINTEMWQVGGNLSVGSLWLVVLLFALLAVAF
LLVRLPEEVDRADDAVDDALLLRACAGSPLEETCRELVEDPDADPAAYAEVTGFERWNLILVLMVVQVVQVLLLSLAVFA
FLMVFGGLIMTGPVIEAWQAGDDFSESRALVQVSVFLAAFSGLYLTVSTVTDETYRAQFFSGVTRELERAVGMRAVYLAL
RERS
>Mature_323_residues
TVPPPPEPIAAADAWFLQHGLSYFVPERRADVRNALRLRRTVPLLLLVALLAAAAGAALAWVSGQFSAAPATLVSLGLAA
AVWYALTALHARQIVAWGLKRTFGGLRRLLPMTTRALPLLLLAITFLFINTEMWQVGGNLSVGSLWLVVLLFALLAVAFL
LVRLPEEVDRADDAVDDALLLRACAGSPLEETCRELVEDPDADPAAYAEVTGFERWNLILVLMVVQVVQVLLLSLAVFAF
LMVFGGLIMTGPVIEAWQAGDDFSESRALVQVSVFLAAFSGLYLTVSTVTDETYRAQFFSGVTRELERAVGMRAVYLALR
ERS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35269; Mature: 35138

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVPPPPEPIAAADAWFLQHGLSYFVPERRADVRNALRLRRTVPLLLLVALLAAAAGAAL
CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWVSGQFSAAPATLVSLGLAAAVWYALTALHARQIVAWGLKRTFGGLRRLLPMTTRALPL
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLAITFLFINTEMWQVGGNLSVGSLWLVVLLFALLAVAFLLVRLPEEVDRADDAVDDAL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LLRACAGSPLEETCRELVEDPDADPAAYAEVTGFERWNLILVLMVVQVVQVLLLSLAVFA
HHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FLMVFGGLIMTGPVIEAWQAGDDFSESRALVQVSVFLAAFSGLYLTVSTVTDETYRAQFF
HHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHEEEEHHHCHHHHHHHH
SGVTRELERAVGMRAVYLALRERS
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TVPPPPEPIAAADAWFLQHGLSYFVPERRADVRNALRLRRTVPLLLLVALLAAAAGAAL
CCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWVSGQFSAAPATLVSLGLAAAVWYALTALHARQIVAWGLKRTFGGLRRLLPMTTRALPL
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLAITFLFINTEMWQVGGNLSVGSLWLVVLLFALLAVAFLLVRLPEEVDRADDAVDDAL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LLRACAGSPLEETCRELVEDPDADPAAYAEVTGFERWNLILVLMVVQVVQVLLLSLAVFA
HHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FLMVFGGLIMTGPVIEAWQAGDDFSESRALVQVSVFLAAFSGLYLTVSTVTDETYRAQFF
HHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHEEEEHHHCHHHHHHHH
SGVTRELERAVGMRAVYLALRERS
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA