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The map label for this gene is ribF [H]

Identifier: 119717411

GI number: 119717411

Start: 3386051

End: 3386983

Strand: Reverse

Name: ribF [H]

Synonym: Noca_3187

Alternate gene names: 119717411

Gene position: 3386983-3386051 (Counterclockwise)

Preceding gene: 119717412

Following gene: 119717410

Centisome position: 67.93

GC content: 73.42

Gene sequence:

>933_bases
GTGCAGATCTGGCGCTCCCTGGAGGAGGTCCCCTCCGGCCTCGGGCCGACCGCCGTGGTGATCGGCAACTTCGACGGGGT
CCACCTCGGCCACCGGCACGTCGTCAACCGGGCGCGCGAGACGGCCGCCGAGCGGTCGCTGACCGTCGTCGCGGTCACCT
TCGAGCCACATCCGATGGCGGTGCTGCGGCCCGAGCACGCGCCCACGACGCTGACCTCGCTGGAGATCCGCGCCGAGCTG
CTGGCCGACGCCGGCGCCGACGCGGTGCTGGTGCTGCCGTTCGACCGGGGCGTCGCCGCATGGACACCGGAGGAGTTCGT
CGAGCGGGTGCTCGTCGATGCGCTGCACGCGGCCGTGGTCGTGGTCGGCGCGAACTTCCGGTTCGGCAACAAGGCCGCCG
GAGATGTCGCGACCCTGCGCCAGGCGGGGGAGCGGCACGGATTCGAGGCGGAGGGCATTGCACTCGACGGTGGCCCGCAG
GTCTGGTCCTCGACGTACGTCCGGATGAGCCTGGCCGCCGGCGACGTCGCGGGCGCGGCGGAGGCGCTCGGCCGGCCGTA
CGCCGTGCGCGGCGTCGTGGTCCGTGGCGACCAGCGCGGCCGCGACCTCGGGTTCCCGACCGCGAACGTGCCGGCCGACG
AGCTCACGGCGGTGCCACCCGACGGTGTGTACGCCGGCCGGCTGCGCCGGCTGGACACCGGTGAGACGTTCCCGGCCGCG
ATCAGCGTCGGCACCAACCCGACCTTCGACGGCGTCCGCGACCGGCGGGTCGAGGCCTACGTGCTCGACCGGACCGACCT
GGACCTCTACGGCGTCGAGGTCGAGGTGAGCTTCGTCGACCGGCTGCGCGGCATGGTCGCCTTCGAGTCGATCGACAAGC
TCGTGGCCCAGATGAACGACGACGTCGACCGCGCCCGAGAGCTGCTGGCGTGA

Upstream 100 bases:

>100_bases
TGTTCGCCCCGGACGGGGAGTTCCTCGCGCTCTACGAGCCGCGCGGCGGCGCGGCCAAGGCCGTCGCGGTCTTCGTGTGA
GCGCTCGGTAGGCTTCCCCG

Downstream 100 bases:

>100_bases
CCGTCCCCCCGCCCCCGGAGCCGATCGCGGCCGCGGACGCGTGGTTCCTCCAGCACGGGCTGTCCTACTTCGTGCCCGAG
CGCCGCGCGGACGTGCGCAA

Product: riboflavin kinase / FMN adenylyltransferase

Products: NA

Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MQIWRSLEEVPSGLGPTAVVIGNFDGVHLGHRHVVNRARETAAERSLTVVAVTFEPHPMAVLRPEHAPTTLTSLEIRAEL
LADAGADAVLVLPFDRGVAAWTPEEFVERVLVDALHAAVVVVGANFRFGNKAAGDVATLRQAGERHGFEAEGIALDGGPQ
VWSSTYVRMSLAAGDVAGAAEALGRPYAVRGVVVRGDQRGRDLGFPTANVPADELTAVPPDGVYAGRLRRLDTGETFPAA
ISVGTNPTFDGVRDRRVEAYVLDRTDLDLYGVEVEVSFVDRLRGMVAFESIDKLVAQMNDDVDRARELLA

Sequences:

>Translated_310_residues
MQIWRSLEEVPSGLGPTAVVIGNFDGVHLGHRHVVNRARETAAERSLTVVAVTFEPHPMAVLRPEHAPTTLTSLEIRAEL
LADAGADAVLVLPFDRGVAAWTPEEFVERVLVDALHAAVVVVGANFRFGNKAAGDVATLRQAGERHGFEAEGIALDGGPQ
VWSSTYVRMSLAAGDVAGAAEALGRPYAVRGVVVRGDQRGRDLGFPTANVPADELTAVPPDGVYAGRLRRLDTGETFPAA
ISVGTNPTFDGVRDRRVEAYVLDRTDLDLYGVEVEVSFVDRLRGMVAFESIDKLVAQMNDDVDRARELLA
>Mature_310_residues
MQIWRSLEEVPSGLGPTAVVIGNFDGVHLGHRHVVNRARETAAERSLTVVAVTFEPHPMAVLRPEHAPTTLTSLEIRAEL
LADAGADAVLVLPFDRGVAAWTPEEFVERVLVDALHAAVVVVGANFRFGNKAAGDVATLRQAGERHGFEAEGIALDGGPQ
VWSSTYVRMSLAAGDVAGAAEALGRPYAVRGVVVRGDQRGRDLGFPTANVPADELTAVPPDGVYAGRLRRLDTGETFPAA
ISVGTNPTFDGVRDRRVEAYVLDRTDLDLYGVEVEVSFVDRLRGMVAFESIDKLVAQMNDDVDRARELLA

Specific function: Unknown

COG id: COG0196

COG function: function code H; FAD synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribF family [H]

Homologues:

Organism=Homo sapiens, GI269973877, Length=128, Percent_Identity=32.03125, Blast_Score=72, Evalue=7e-13,
Organism=Escherichia coli, GI1786208, Length=313, Percent_Identity=38.3386581469649, Blast_Score=191, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI17541882, Length=125, Percent_Identity=36, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24644927, Length=128, Percent_Identity=32.8125, Blast_Score=76, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015864
- InterPro:   IPR015865
- InterPro:   IPR002606
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]

EC number: =2.7.1.26; =2.7.7.2 [H]

Molecular weight: Translated: 33282; Mature: 33282

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIWRSLEEVPSGLGPTAVVIGNFDGVHLGHRHVVNRARETAAERSLTVVAVTFEPHPMA
CHHHHHHHHHHCCCCCCEEEEECCCCEECCHHHHHHHHHHHHHHCCEEEEEEEECCCCEE
VLRPEHAPTTLTSLEIRAELLADAGADAVLVLPFDRGVAAWTPEEFVERVLVDALHAAVV
EECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEE
VVGANFRFGNKAAGDVATLRQAGERHGFEAEGIALDGGPQVWSSTYVRMSLAAGDVAGAA
EEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCHHHCCEEEEEEECCCHHHHH
EALGRPYAVRGVVVRGDQRGRDLGFPTANVPADELTAVPPDGVYAGRLRRLDTGETFPAA
HHHCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHEEECCCCCCCCEE
ISVGTNPTFDGVRDRRVEAYVLDRTDLDLYGVEVEVSFVDRLRGMVAFESIDKLVAQMND
EECCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCC
DVDRARELLA
CHHHHHHHCC
>Mature Secondary Structure
MQIWRSLEEVPSGLGPTAVVIGNFDGVHLGHRHVVNRARETAAERSLTVVAVTFEPHPMA
CHHHHHHHHHHCCCCCCEEEEECCCCEECCHHHHHHHHHHHHHHCCEEEEEEEECCCCEE
VLRPEHAPTTLTSLEIRAELLADAGADAVLVLPFDRGVAAWTPEEFVERVLVDALHAAVV
EECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEE
VVGANFRFGNKAAGDVATLRQAGERHGFEAEGIALDGGPQVWSSTYVRMSLAAGDVAGAA
EEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCHHHCCEEEEEEECCCHHHHH
EALGRPYAVRGVVVRGDQRGRDLGFPTANVPADELTAVPPDGVYAGRLRRLDTGETFPAA
HHHCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHEEECCCCCCCCEE
ISVGTNPTFDGVRDRRVEAYVLDRTDLDLYGVEVEVSFVDRLRGMVAFESIDKLVAQMND
EECCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCC
DVDRARELLA
CHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7772835; 3023344 [H]