Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is ag84 [H]
Identifier: 119717279
GI number: 119717279
Start: 3253697
End: 3254440
Strand: Reverse
Name: ag84 [H]
Synonym: Noca_3055
Alternate gene names: 119717279
Gene position: 3254440-3253697 (Counterclockwise)
Preceding gene: 119717280
Following gene: 119717278
Centisome position: 65.27
GC content: 71.24
Gene sequence:
>744_bases ATGCCGCTGACGCCTGAGGACGTGAGCAACAAGCGCTTTACTCCCGTCCGGCTCCGTGAGGGCTACGACATGGGTGAGGT CGACCAGTTCCTCGACGAGGTGGAGGCCGAGCTGGCGCGGCTCACGAAGGAGAACGACGACCTCCGGTCGAAGCTGGCCA CGGCGCAGGGCTCCGGAGGCGCCACCGAGACCGCGCCCCAGCCGCGCGTCGAGGAGCGGGCGCCCGAGCCCGAGCCCGAG CCGGTCGCCGCGCCCACCCCCGTGGTCGCCGCGAGCCCGGTCGAGACGATCCGGGTCGAGACCGTCCCCGAGGCGTCCAA CGCCGCGGCCCGCCTGCTCGAGATCGCCACCCGCAACGCCGACGAGCTCGTCGAGGACGCGAAGAACGAGGCCGACAAGA TCGTCGGCGAGGCCCGCACCAAGGCGGAGCGCCTGGAGTCCGAGGCGAAGACCAAGTCCGACCGGATGGAGTCCGACGCG CGCACCCGCGCCCAGATGCTCGACTCCGAGACCGCCGAGCGTCGCCGTCAGATGTTCGGCGACCTGGAGAAGGAGCGCGA CAAGCTCAACGGCGAGGTCGAGAACCTCCGCTCCTTCGAGCGCGAGTACCGGTCCCGCCTCAAGAGCTACTTCACCCAGC AGCTCGAGGCGCTCAGCGGTGGCACCGAGGCCCCGATGTCCTCGGGCGACGAGGCCCCCGCGCCCAAGCGGCTGCGCTCC ATCCTCGGTGAGGACGAGACCTGA
Upstream 100 bases:
>100_bases TACGCCGCGCGGAAGTGGTCCCGGGCAGTGCGCCGGGCCCGGGAGCAGGCGCTATTGTTCGACGGACAGTTTCTTTGACG ATCAATGAATGGGTGAGGTC
Downstream 100 bases:
>100_bases GCCACGCTCCGCGACACCGTCGTACCACTGCGGCCGGCCCCCTGGGGGCCGGCCGCAGTGGCGTTCCCGGGGCATCGCGG TGTGCCGCATTGGAGGCGTT
Product: DivIVA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MPLTPEDVSNKRFTPVRLREGYDMGEVDQFLDEVEAELARLTKENDDLRSKLATAQGSGGATETAPQPRVEERAPEPEPE PVAAPTPVVAASPVETIRVETVPEASNAAARLLEIATRNADELVEDAKNEADKIVGEARTKAERLESEAKTKSDRMESDA RTRAQMLDSETAERRRQMFGDLEKERDKLNGEVENLRSFEREYRSRLKSYFTQQLEALSGGTEAPMSSGDEAPAPKRLRS ILGEDET
Sequences:
>Translated_247_residues MPLTPEDVSNKRFTPVRLREGYDMGEVDQFLDEVEAELARLTKENDDLRSKLATAQGSGGATETAPQPRVEERAPEPEPE PVAAPTPVVAASPVETIRVETVPEASNAAARLLEIATRNADELVEDAKNEADKIVGEARTKAERLESEAKTKSDRMESDA RTRAQMLDSETAERRRQMFGDLEKERDKLNGEVENLRSFEREYRSRLKSYFTQQLEALSGGTEAPMSSGDEAPAPKRLRS ILGEDET >Mature_246_residues PLTPEDVSNKRFTPVRLREGYDMGEVDQFLDEVEAELARLTKENDDLRSKLATAQGSGGATETAPQPRVEERAPEPEPEP VAAPTPVVAASPVETIRVETVPEASNAAARLLEIATRNADELVEDAKNEADKIVGEARTKAERLESEAKTKSDRMESDAR TRAQMLDSETAERRRQMFGDLEKERDKLNGEVENLRSFEREYRSRLKSYFTQQLEALSGGTEAPMSSGDEAPAPKRLRSI LGEDET
Specific function: Unknown
COG id: COG3599
COG function: function code D; Cell division initiation protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007793 - InterPro: IPR019933 [H]
Pfam domain/function: PF05103 DivIVA [H]
EC number: NA
Molecular weight: Translated: 27433; Mature: 27301
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLTPEDVSNKRFTPVRLREGYDMGEVDQFLDEVEAELARLTKENDDLRSKLATAQGSGG CCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC ATETAPQPRVEERAPEPEPEPVAAPTPVVAASPVETIRVETVPEASNAAARLLEIATRNA CCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHEEECCCCHHHHHHHHHHHHHCCH DELVEDAKNEADKIVGEARTKAERLESEAKTKSDRMESDARTRAQMLDSETAERRRQMFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLEKERDKLNGEVENLRSFEREYRSRLKSYFTQQLEALSGGTEAPMSSGDEAPAPKRLRS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH ILGEDET HHCCCCC >Mature Secondary Structure PLTPEDVSNKRFTPVRLREGYDMGEVDQFLDEVEAELARLTKENDDLRSKLATAQGSGG CCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC ATETAPQPRVEERAPEPEPEPVAAPTPVVAASPVETIRVETVPEASNAAARLLEIATRNA CCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHEEECCCCHHHHHHHHHHHHHCCH DELVEDAKNEADKIVGEARTKAERLESEAKTKSDRMESDARTRAQMLDSETAERRRQMFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLEKERDKLNGEVENLRSFEREYRSRLKSYFTQQLEALSGGTEAPMSSGDEAPAPKRLRS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH ILGEDET HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]