Definition | Nocardioides sp. JS614 chromosome, complete genome. |
---|---|
Accession | NC_008699 |
Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119717280
Identifier: 119717280
GI number: 119717280
Start: 3254550
End: 3254840
Strand: Reverse
Name: 119717280
Synonym: Noca_3056
Alternate gene names: NA
Gene position: 3254840-3254550 (Counterclockwise)
Preceding gene: 119717281
Following gene: 119717279
Centisome position: 65.28
GC content: 63.92
Gene sequence:
>291_bases GTGCACGTGGTCGGGTCGATCATCGAGATCGTCCTCTGGGTCTTCATCGCCCTGCTCTGGATCCGGTTCGTCGTGGACTG GGTGCAGATCTTCGCCCGGTCCTGGGTGCCGCGGGGTCCGATGCTGCTGGTCCTGGAGGCCGTCTACTCCACCACCGACC CGCCGATCAAGGCGTTGCGCCGGGTGATCCCGCCGCTGCGGATCGGGAGCATCTCGCTCGACCTGAGCTTCCTGATCGTG ATGATCACTGCCTACGTGCTCCTCCAGATCAACCGGGAGATCATGCTCTGA
Upstream 100 bases:
>100_bases CAAGGTCTTCCTGCTCTCACCGCCGAACGTCTCGGTGGCTGCCGAGGACAAGCAGCGCATCGCTGAGGGCGGATTCTTCA ACCAGAGCTGAGGGCAGCAC
Downstream 100 bases:
>100_bases TGGACCCGGTACGCCGCGCGGAAGTGGTCCCGGGCAGTGCGCCGGGCCCGGGAGCAGGCGCTATTGTTCGACGGACAGTT TCTTTGACGATCAATGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; YGGT Family Protein
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MHVVGSIIEIVLWVFIALLWIRFVVDWVQIFARSWVPRGPMLLVLEAVYSTTDPPIKALRRVIPPLRIGSISLDLSFLIV MITAYVLLQINREIML
Sequences:
>Translated_96_residues MHVVGSIIEIVLWVFIALLWIRFVVDWVQIFARSWVPRGPMLLVLEAVYSTTDPPIKALRRVIPPLRIGSISLDLSFLIV MITAYVLLQINREIML >Mature_96_residues MHVVGSIIEIVLWVFIALLWIRFVVDWVQIFARSWVPRGPMLLVLEAVYSTTDPPIKALRRVIPPLRIGSISLDLSFLIV MITAYVLLQINREIML
Specific function: Unknown
COG id: COG0762
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11057; Mature: 11057
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVVGSIIEIVLWVFIALLWIRFVVDWVQIFARSWVPRGPMLLVLEAVYSTTDPPIKALR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHH RVIPPLRIGSISLDLSFLIVMITAYVLLQINREIML HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHVVGSIIEIVLWVFIALLWIRFVVDWVQIFARSWVPRGPMLLVLEAVYSTTDPPIKALR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHH RVIPPLRIGSISLDLSFLIVMITAYVLLQINREIML HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA