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The map label for this gene is dksA [C]

Identifier: 119717278

GI number: 119717278

Start: 3252670

End: 3253521

Strand: Reverse

Name: dksA [C]

Synonym: Noca_3054

Alternate gene names: 119717278

Gene position: 3253521-3252670 (Counterclockwise)

Preceding gene: 119717279

Following gene: 119717277

Centisome position: 65.25

GC content: 70.77

Gene sequence:

>852_bases
ATGGCTCGCACCACGAGGAAGTCGCTCGCCGGACACGCGGCCTCTGCCGCCCGCAAGGTGATGCCGCGCCGGCCGGCGAA
GAAGGCTGCGACCGAGTCGACTCCGGGAGCCACGACGGCGAAGAAGAACGGCACGGCGGCGAAGGCGGCGCCCGCCAAGA
AGGCGGCGCCCGCGAAGAAGGCCGCGCCCGCGAAGAAGGCGGCACCCGCGAAGAAGGCCGCGCCCGCGAAGAAGGCGGCA
CCCGCGAAGAAGGCCGCGCCCGCGAAGAAGGCGGCACCCGCGAAGAAGGCGGCACCCGCGAAGAAGGCGGCACCCGCGAA
GAAGGCGGCACCCGCCAAGAAGGCGGCACCCGCCAAGAAGGCGGCACCCGCCAAGAAAGCGGCACCCGCCAAGAAGGCGA
CGCCCGCCAAGAAGGCGGCACCCGCCAAGAAGGCGGCACCGGCGAAGAAGGTGTCGCCCAGCGCACTCGTGGTCAAGGAG
GGCGAGGCCGCCTGGACCAAGGCCGAGCTCAAGGAGGTGCTCGACGAGCTGCACGAACAGCGCGAGCACAGCCAGCGGAT
CATCGAGGCCCAGGAAGCCGAGCTCGACGGCCTGATGCGCGACTCCGGTGACGGAGCCGGTCAGGACCAGGCGGACCTCG
GGGCGACCAGCTTCGAGCGCGACCACGAGCTGACCGTCCTCAACAGCGAGCGGGACAAGCTGGCCCAGATCGAGCGGGCC
CTGGCGCGCATCGACGACGGCACGTACGGCGTGTGCGAGTCCTGCGGCAACCCGATCGGCAAGATGCGGCTCATGGCGTT
CCCGCGTGCCACACTGTGCATGACATGCAAGCAGCGCGAGGAACGTCGCTGA

Upstream 100 bases:

>100_bases
CGCGGTGTGCCGCATTGGAGGCGTTGGGGATCACCGGCTACCCTCCACGCACACCTGTGGGTCCGACCCCACAGCCGCCG
AGGCCCGAGGAGGCCCGACC

Downstream 100 bases:

>100_bases
CCGGCGACCAGTCTGATCCGGCCCGGCCCCGACCGACCCGACCGCGACGGCACCGCCTGCTGGCCGTCTACGCCGCGGTC
GCGCTCACGGCGTACGCCGT

Product: zinc finger, DksA/TraR C4-type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MARTTRKSLAGHAASAARKVMPRRPAKKAATESTPGATTAKKNGTAAKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAA
PAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKATPAKKAAPAKKAAPAKKVSPSALVVKE
GEAAWTKAELKEVLDELHEQREHSQRIIEAQEAELDGLMRDSGDGAGQDQADLGATSFERDHELTVLNSERDKLAQIERA
LARIDDGTYGVCESCGNPIGKMRLMAFPRATLCMTCKQREERR

Sequences:

>Translated_283_residues
MARTTRKSLAGHAASAARKVMPRRPAKKAATESTPGATTAKKNGTAAKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAA
PAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKATPAKKAAPAKKAAPAKKVSPSALVVKE
GEAAWTKAELKEVLDELHEQREHSQRIIEAQEAELDGLMRDSGDGAGQDQADLGATSFERDHELTVLNSERDKLAQIERA
LARIDDGTYGVCESCGNPIGKMRLMAFPRATLCMTCKQREERR
>Mature_282_residues
ARTTRKSLAGHAASAARKVMPRRPAKKAATESTPGATTAKKNGTAAKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAP
AKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKATPAKKAAPAKKAAPAKKVSPSALVVKEG
EAAWTKAELKEVLDELHEQREHSQRIIEAQEAELDGLMRDSGDGAGQDQADLGATSFERDHELTVLNSERDKLAQIERAL
ARIDDGTYGVCESCGNPIGKMRLMAFPRATLCMTCKQREERR

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 7 G5 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011098
- InterPro:   IPR005877
- InterPro:   IPR019948
- InterPro:   IPR019931
- InterPro:   IPR001899 [H]

Pfam domain/function: PF07501 G5; PF00746 Gram_pos_anchor; PF04650 YSIRK_signal [H]

EC number: NA

Molecular weight: Translated: 29382; Mature: 29251

Theoretical pI: Translated: 11.03; Mature: 11.03

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTTRKSLAGHAASAARKVMPRRPAKKAATESTPGATTAKKNGTAAKAAPAKKAAPAKK
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCHHCCCCHHCCCCHH
AAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKK
CCCCHHCCCCHHCCCCHHCCCCHHCCCCHHCCCCHHCCCCHHCCCCHHCCCCHHCCCCHH
AAPAKKAAPAKKATPAKKAAPAKKAAPAKKVSPSALVVKEGEAAWTKAELKEVLDELHEQ
CCCCHHCCCCCCCCCCHHHCCCHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
REHSQRIIEAQEAELDGLMRDSGDGAGQDQADLGATSFERDHELTVLNSERDKLAQIERA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCEEEECCCHHHHHHHHHH
LARIDDGTYGVCESCGNPIGKMRLMAFPRATLCMTCKQREERR
HHHHCCCCCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARTTRKSLAGHAASAARKVMPRRPAKKAATESTPGATTAKKNGTAAKAAPAKKAAPAKK
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCHHCCCCHHCCCCHH
AAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKKAAPAKK
CCCCHHCCCCHHCCCCHHCCCCHHCCCCHHCCCCHHCCCCHHCCCCHHCCCCHHCCCCHH
AAPAKKAAPAKKATPAKKAAPAKKAAPAKKVSPSALVVKEGEAAWTKAELKEVLDELHEQ
CCCCHHCCCCCCCCCCHHHCCCHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
REHSQRIIEAQEAELDGLMRDSGDGAGQDQADLGATSFERDHELTVLNSERDKLAQIERA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCEEEECCCHHHHHHHHHH
LARIDDGTYGVCESCGNPIGKMRLMAFPRATLCMTCKQREERR
HHHHCCCCCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12950922 [H]