Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119717272

Identifier: 119717272

GI number: 119717272

Start: 3244551

End: 3246152

Strand: Reverse

Name: 119717272

Synonym: Noca_3048

Alternate gene names: NA

Gene position: 3246152-3244551 (Counterclockwise)

Preceding gene: 119717273

Following gene: 119717269

Centisome position: 65.11

GC content: 73.16

Gene sequence:

>1602_bases
GTGGAGAACAGCCCGGAGTACCTCGAGAGCGGAGCCGGCGAACCGCTCCGGACCCCGTCCGAACCGACCGGTGGCGGGCG
CCGCCGCACCGGCTGGATCGTCGGCGGGGCGGTGGCCTTCGTCGCCCTGGTCGGCGCCGGCGCGTGGGCGGCCTGGTCGT
TCTTCGCCACCGGCCCGCAGCCGGCCGAGGCACTGCCCGGCTCGACGATCGCCTACGCCAGCGTCGACCTCGACCCGAGC
GGTGGCCAGAAGATCGAGGCGCTGCGGACGCTGCGCAAGTTCCCGGCGTTCAAGGACCACATCGGGCTCCAGACCGACGA
CGACGTCCGTCAACGGATCTTCGAGGAGATCCAGGGCTCCGGCGCCTGCCCGGACCTCGACTACGGCGACGACGTCGAGC
CCTGGCTCGGCGACCGGATCGCCGTCGCCGCGGTCGACGCGGGCGAGGACGCTCTGTCTCCCGTGTTCGTGCTCCAGGTG
AGCGACGAGGACCAGGCGGACCAGGGGCTGGCGAAGATCCAGGACTGCAGCGGCGGCGACGGCGGCGCCTGGTCGATCGC
CGACGGCTGGGCGCTGGTGGGGGAGACCCAGGAGATCGTCGACCGGGTCGCCGCCGACGCCGCGAAGTCCCCGCTCTCGG
ACGACGAGGACTACCGCACCTGGACCGACGCGGCCGGCGACGCCGGGATCGCGACGGCCTACCTCGCCCCCGAGGCCGGG
CAGGTCCTCGCCGACAACCTCGGCGGACTGATGCCGCCGATGTACGGGCTCGGCGAGGCCGTCCCCGGCTCCGACACCGA
CCTGATGCCCTCCGAGGTCACCCAGGGCCTCGAGGAGTTCCGCGGCCTGGCCGCCACCCTCCGCTTCGACGACGGCTCGC
TCGAGCTGGAGGTGGCCGCCGACACCGGCAGGTCCCAGGACGCGCTCGACGGCGCCGACGGCGGGGACGACGTGCTGGCA
ACGCTGCCCGACGACACCGCGGCCGCGCTGGGCCTCGGGTTCGCCGACGGGTGGTTCGGCGACCTCGTCGACCAGTTCGC
CGGCCAGCTCGGCGGTGACCTGAGCGGCGACGAGCTCCTCGACGAGCTCTCCTCAGAGTCCGGCCTCGACCTGCCCGAGG
ACGTCGAGACGCTGACCGGCGAGTCCGCCGCGCTGGCCATCGGGGGCGACTTCGACCTCGAGACGTTCGTGAACTCCACG
GACGGCAGCGGCGTGCCGGTCGGGCTGAAGGTCCAGGGCGACCCGGACGCGATCGAGACGGTGCTGGACAAGCTGCGCCC
CCAGCTCGACGGCGCCGAGTCCTTCCTCGGCAGTGACAGCGACGGCGACCTGATCGCCATCGGCCCCGACGGCGACTACC
GCCAGCAGCTGCTCGAGGACGGGGACCTCGGGGACTCCGAGGTGTTCGAGAACGTCGTGCGCGAGGCCGGAGACGCGGCC
GCGATCCTGTTCGTGAACTTCGACGCCGGGGACTGGCTGGCCAGCCTCGCGGACGGTGACCCGGAGGTCGAGGAGAACCT
CGAGCCGCTGCAGGGCCTCGGCCTGAGCGGCTGGCTCCAGGACGACGCCAGCCACGTGGTGCTCCGGCTCACGACCGACT
GA

Upstream 100 bases:

>100_bases
CACGACCACGATCACCCCCTCGATCACCACCACCACGACCATCCCGAGCACCGCTCGGATCGGCACTCTCCGGACCACCG
CGCCGGGTAGGCTCCCGCCC

Downstream 100 bases:

>100_bases
TCGGCGCCACGGTCGCCCCCGTCACTCGCACCAGGTCGGCCGGCGCGATCGCCAGGTCCAGGCCGCGGCGTCCGCCCGAG
ACGTAGACGGTGTCGAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MENSPEYLESGAGEPLRTPSEPTGGGRRRTGWIVGGAVAFVALVGAGAWAAWSFFATGPQPAEALPGSTIAYASVDLDPS
GGQKIEALRTLRKFPAFKDHIGLQTDDDVRQRIFEEIQGSGACPDLDYGDDVEPWLGDRIAVAAVDAGEDALSPVFVLQV
SDEDQADQGLAKIQDCSGGDGGAWSIADGWALVGETQEIVDRVAADAAKSPLSDDEDYRTWTDAAGDAGIATAYLAPEAG
QVLADNLGGLMPPMYGLGEAVPGSDTDLMPSEVTQGLEEFRGLAATLRFDDGSLELEVAADTGRSQDALDGADGGDDVLA
TLPDDTAAALGLGFADGWFGDLVDQFAGQLGGDLSGDELLDELSSESGLDLPEDVETLTGESAALAIGGDFDLETFVNST
DGSGVPVGLKVQGDPDAIETVLDKLRPQLDGAESFLGSDSDGDLIAIGPDGDYRQQLLEDGDLGDSEVFENVVREAGDAA
AILFVNFDAGDWLASLADGDPEVEENLEPLQGLGLSGWLQDDASHVVLRLTTD

Sequences:

>Translated_533_residues
MENSPEYLESGAGEPLRTPSEPTGGGRRRTGWIVGGAVAFVALVGAGAWAAWSFFATGPQPAEALPGSTIAYASVDLDPS
GGQKIEALRTLRKFPAFKDHIGLQTDDDVRQRIFEEIQGSGACPDLDYGDDVEPWLGDRIAVAAVDAGEDALSPVFVLQV
SDEDQADQGLAKIQDCSGGDGGAWSIADGWALVGETQEIVDRVAADAAKSPLSDDEDYRTWTDAAGDAGIATAYLAPEAG
QVLADNLGGLMPPMYGLGEAVPGSDTDLMPSEVTQGLEEFRGLAATLRFDDGSLELEVAADTGRSQDALDGADGGDDVLA
TLPDDTAAALGLGFADGWFGDLVDQFAGQLGGDLSGDELLDELSSESGLDLPEDVETLTGESAALAIGGDFDLETFVNST
DGSGVPVGLKVQGDPDAIETVLDKLRPQLDGAESFLGSDSDGDLIAIGPDGDYRQQLLEDGDLGDSEVFENVVREAGDAA
AILFVNFDAGDWLASLADGDPEVEENLEPLQGLGLSGWLQDDASHVVLRLTTD
>Mature_533_residues
MENSPEYLESGAGEPLRTPSEPTGGGRRRTGWIVGGAVAFVALVGAGAWAAWSFFATGPQPAEALPGSTIAYASVDLDPS
GGQKIEALRTLRKFPAFKDHIGLQTDDDVRQRIFEEIQGSGACPDLDYGDDVEPWLGDRIAVAAVDAGEDALSPVFVLQV
SDEDQADQGLAKIQDCSGGDGGAWSIADGWALVGETQEIVDRVAADAAKSPLSDDEDYRTWTDAAGDAGIATAYLAPEAG
QVLADNLGGLMPPMYGLGEAVPGSDTDLMPSEVTQGLEEFRGLAATLRFDDGSLELEVAADTGRSQDALDGADGGDDVLA
TLPDDTAAALGLGFADGWFGDLVDQFAGQLGGDLSGDELLDELSSESGLDLPEDVETLTGESAALAIGGDFDLETFVNST
DGSGVPVGLKVQGDPDAIETVLDKLRPQLDGAESFLGSDSDGDLIAIGPDGDYRQQLLEDGDLGDSEVFENVVREAGDAA
AILFVNFDAGDWLASLADGDPEVEENLEPLQGLGLSGWLQDDASHVVLRLTTD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55345; Mature: 55345

Theoretical pI: Translated: 3.50; Mature: 3.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENSPEYLESGAGEPLRTPSEPTGGGRRRTGWIVGGAVAFVALVGAGAWAAWSFFATGPQ
CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHCCCCC
PAEALPGSTIAYASVDLDPSGGQKIEALRTLRKFPAFKDHIGLQTDDDVRQRIFEEIQGS
CHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHCCC
GACPDLDYGDDVEPWLGDRIAVAAVDAGEDALSPVFVLQVSDEDQADQGLAKIQDCSGGD
CCCCCCCCCCCCCHHCCCEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCC
GGAWSIADGWALVGETQEIVDRVAADAAKSPLSDDEDYRTWTDAAGDAGIATAYLAPEAG
CCEEEECCCEEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCEEEEECCCCC
QVLADNLGGLMPPMYGLGEAVPGSDTDLMPSEVTQGLEEFRGLAATLRFDDGSLELEVAA
HHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEC
DTGRSQDALDGADGGDDVLATLPDDTAAALGLGFADGWFGDLVDQFAGQLGGDLSGDELL
CCCCCCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHH
DELSSESGLDLPEDVETLTGESAALAIGGDFDLETFVNSTDGSGVPVGLKVQGDPDAIET
HHHCCCCCCCCCHHHHHHCCCCEEEEECCCCCHHHHHCCCCCCCCEEEEEECCCHHHHHH
VLDKLRPQLDGAESFLGSDSDGDLIAIGPDGDYRQQLLEDGDLGDSEVFENVVREAGDAA
HHHHHCCCCCCHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEE
AILFVNFDAGDWLASLADGDPEVEENLEPLQGLGLSGWLQDDASHVVLRLTTD
EEEEEEECCHHHHHHHCCCCCCHHHCCCHHHCCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MENSPEYLESGAGEPLRTPSEPTGGGRRRTGWIVGGAVAFVALVGAGAWAAWSFFATGPQ
CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHCCCCC
PAEALPGSTIAYASVDLDPSGGQKIEALRTLRKFPAFKDHIGLQTDDDVRQRIFEEIQGS
CHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHCCC
GACPDLDYGDDVEPWLGDRIAVAAVDAGEDALSPVFVLQVSDEDQADQGLAKIQDCSGGD
CCCCCCCCCCCCCHHCCCEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCC
GGAWSIADGWALVGETQEIVDRVAADAAKSPLSDDEDYRTWTDAAGDAGIATAYLAPEAG
CCEEEECCCEEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCEEEEECCCCC
QVLADNLGGLMPPMYGLGEAVPGSDTDLMPSEVTQGLEEFRGLAATLRFDDGSLELEVAA
HHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEC
DTGRSQDALDGADGGDDVLATLPDDTAAALGLGFADGWFGDLVDQFAGQLGGDLSGDELL
CCCCCCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHH
DELSSESGLDLPEDVETLTGESAALAIGGDFDLETFVNSTDGSGVPVGLKVQGDPDAIET
HHHCCCCCCCCCHHHHHHCCCCEEEEECCCCCHHHHHCCCCCCCCEEEEEECCCHHHHHH
VLDKLRPQLDGAESFLGSDSDGDLIAIGPDGDYRQQLLEDGDLGDSEVFENVVREAGDAA
HHHHHCCCCCCHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEE
AILFVNFDAGDWLASLADGDPEVEENLEPLQGLGLSGWLQDDASHVVLRLTTD
EEEEEEECCHHHHHHHCCCCCCHHHCCCHHHCCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA