Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717273
Identifier: 119717273
GI number: 119717273
Start: 3246163
End: 3246768
Strand: Reverse
Name: 119717273
Synonym: Noca_3049
Alternate gene names: NA
Gene position: 3246768-3246163 (Counterclockwise)
Preceding gene: 119717274
Following gene: 119717272
Centisome position: 65.12
GC content: 73.1
Gene sequence:
>606_bases GTGAGCCACCCCGGGCATCGAACCTCCTTGCGCTCCGGCCTGGTCCAGCTCCTGATCGGCGTGGTCGTCCTCGCCGCCGC CGGGGCACTCGCCGGGGTGGTGTGGGAGTGGGTCTGGACCGCGCCCGCGGGTGTCGTCGCCGACCACCGGTGGCTCGCCG AGGACGAGGCCGGCCTGCGCGGGCAGTTCTCCGGCACCGGCTGGTTCGTGATCGTCGCCACCATCACCGGACTGCTCGCG GGCGGTCTCGTCGCGACCTTCCTCGACCGGGTGCCGCTGCTCACCCTGCTCACCGTCATCCTCGGCTCCGCGGTCGGCAC CTGGGTGATGCTGAGCGTCGGCTCGGCCCTCGGGCCGCCCGACCCGACCCAGCTCGCGCTCACCGCGAAGAACGGCACGC ACCTGCCCGACGAGCTCGACGTGTCCCGCCGTACGCCGTGGGTCTCGATGCCCGCCGGAGCGCTGGTCGCACTCACCCTG GTCTTCTTCGGGTTCGCGCCGGGGCGCCGGCACCACCACGACCACGATCACCCCCTCGATCACCACCACCACGACCATCC CGAGCACCGCTCGGATCGGCACTCTCCGGACCACCGCGCCGGGTAG
Upstream 100 bases:
>100_bases AGACCTTGGTCATGCGCCTCGACGACCGGCTCCGGGTCACCCCGAGCCCGGCGCTGTTCGCCGACCTCAAGCAGCTGCTG GGGCCCGGGTGCCTGACGGG
Downstream 100 bases:
>100_bases GCTCCCGCCCGTGGAGAACAGCCCGGAGTACCTCGAGAGCGGAGCCGGCGAACCGCTCCGGACCCCGTCCGAACCGACCG GTGGCGGGCGCCGCCGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MSHPGHRTSLRSGLVQLLIGVVVLAAAGALAGVVWEWVWTAPAGVVADHRWLAEDEAGLRGQFSGTGWFVIVATITGLLA GGLVATFLDRVPLLTLLTVILGSAVGTWVMLSVGSALGPPDPTQLALTAKNGTHLPDELDVSRRTPWVSMPAGALVALTL VFFGFAPGRRHHHDHDHPLDHHHHDHPEHRSDRHSPDHRAG
Sequences:
>Translated_201_residues MSHPGHRTSLRSGLVQLLIGVVVLAAAGALAGVVWEWVWTAPAGVVADHRWLAEDEAGLRGQFSGTGWFVIVATITGLLA GGLVATFLDRVPLLTLLTVILGSAVGTWVMLSVGSALGPPDPTQLALTAKNGTHLPDELDVSRRTPWVSMPAGALVALTL VFFGFAPGRRHHHDHDHPLDHHHHDHPEHRSDRHSPDHRAG >Mature_200_residues SHPGHRTSLRSGLVQLLIGVVVLAAAGALAGVVWEWVWTAPAGVVADHRWLAEDEAGLRGQFSGTGWFVIVATITGLLAG GLVATFLDRVPLLTLLTVILGSAVGTWVMLSVGSALGPPDPTQLALTAKNGTHLPDELDVSRRTPWVSMPAGALVALTLV FFGFAPGRRHHHDHDHPLDHHHHDHPEHRSDRHSPDHRAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21502; Mature: 21371
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHPGHRTSLRSGLVQLLIGVVVLAAAGALAGVVWEWVWTAPAGVVADHRWLAEDEAGLR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHCCCCCCCCC GQFSGTGWFVIVATITGLLAGGLVATFLDRVPLLTLLTVILGSAVGTWVMLSVGSALGPP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DPTQLALTAKNGTHLPDELDVSRRTPWVSMPAGALVALTLVFFGFAPGRRHHHDHDHPLD CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC HHHHDHPEHRSDRHSPDHRAG CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SHPGHRTSLRSGLVQLLIGVVVLAAAGALAGVVWEWVWTAPAGVVADHRWLAEDEAGLR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHCCCCCCCCC GQFSGTGWFVIVATITGLLAGGLVATFLDRVPLLTLLTVILGSAVGTWVMLSVGSALGPP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DPTQLALTAKNGTHLPDELDVSRRTPWVSMPAGALVALTLVFFGFAPGRRHHHDHDHPLD CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC HHHHDHPEHRSDRHSPDHRAG CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA