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The map label for this gene is ybgL [C]

Identifier: 119717202

GI number: 119717202

Start: 3165346

End: 3166041

Strand: Reverse

Name: ybgL [C]

Synonym: Noca_2978

Alternate gene names: 119717202

Gene position: 3166041-3165346 (Counterclockwise)

Preceding gene: 119717205

Following gene: 119717201

Centisome position: 63.5

GC content: 75.0

Gene sequence:

>696_bases
ATGGCGCGACCCCGGATCGACCTCAACGCCGACCTCGGTGAGGAGATCACCGACGACGCGGCGCTGCTGGCCGTCGTGAC
GAGCGCGAACGTCGCCTGCGGCTACCACGCCGGCAGTCGGGCCGTGATGCGCGCGGTCTGTGCCGAGGCGGTCCGGCGCG
AGGTCAGCCTGGGCGCCCAGGTCTCCTACGACGACCGCGAGAACTTCGGGCGGGTCCCGCTCTCGGTGTCCTACGACGTG
CTCCGCGAGCACGTCGCCGACCAGGTCGGCGTGCTCTCCGAGATCGCGACCGCCGAGGGCACCGCGGTCCGGTACCTCAA
ACCGCACGGCGCGCTCTACCACCGGGTGCTCGACGACGAGGTGCAGGCCCGGGCGGTCCTCGACGGATCCGGTGGACTGC
CCGTGCTGGGGATGCCCGGCGCGCTGCTGCGGCTGGCCGAGGCCGCCGGCCGGGCGGTGTTCCGCGAGGGCTTCCCCGAC
CGGGGCTACGCCGCGGACGGTCGGCTGCTGCCGCGCTCGGCACCCGGCGCCCTGGTCGAGGACACCGACCGGGTGGTCGC
GCAGGCGGTGGCGCTCGCGGCGCGCGTCGACTCGGTGTGCCTGCACGGCGACTCGCCCGGCGCGGTGGGCCACGCGCTCG
CCGTACGGCGGTCGCTGCAGGATGCCGGCTTCACGCTGCGCTCCTTCGTGACCTAG

Upstream 100 bases:

>100_bases
TCGACCCGCTGGTGGCCGTGGTGCTCGGCGGTGGTCGGGCGACGCTCGGCGACGGGTGGGACGAGGGAGGGCTGCATGGC
CGCGACGATAGCGTCGGGCC

Downstream 100 bases:

>100_bases
CGGGCGTCGAGGCGAGCCCGTCACCCACAGGTTGGTCCACAGGTCTGGACCGGGTCCTGTGCACAGCGTGCTCGAGTGGT
GGATAGCGGGGCGCCGCCTG

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MARPRIDLNADLGEEITDDAALLAVVTSANVACGYHAGSRAVMRAVCAEAVRREVSLGAQVSYDDRENFGRVPLSVSYDV
LREHVADQVGVLSEIATAEGTAVRYLKPHGALYHRVLDDEVQARAVLDGSGGLPVLGMPGALLRLAEAAGRAVFREGFPD
RGYAADGRLLPRSAPGALVEDTDRVVAQAVALAARVDSVCLHGDSPGAVGHALAVRRSLQDAGFTLRSFVT

Sequences:

>Translated_231_residues
MARPRIDLNADLGEEITDDAALLAVVTSANVACGYHAGSRAVMRAVCAEAVRREVSLGAQVSYDDRENFGRVPLSVSYDV
LREHVADQVGVLSEIATAEGTAVRYLKPHGALYHRVLDDEVQARAVLDGSGGLPVLGMPGALLRLAEAAGRAVFREGFPD
RGYAADGRLLPRSAPGALVEDTDRVVAQAVALAARVDSVCLHGDSPGAVGHALAVRRSLQDAGFTLRSFVT
>Mature_230_residues
ARPRIDLNADLGEEITDDAALLAVVTSANVACGYHAGSRAVMRAVCAEAVRREVSLGAQVSYDDRENFGRVPLSVSYDVL
REHVADQVGVLSEIATAEGTAVRYLKPHGALYHRVLDDEVQARAVLDGSGGLPVLGMPGALLRLAEAAGRAVFREGFPDR
GYAADGRLLPRSAPGALVEDTDRVVAQAVALAARVDSVCLHGDSPGAVGHALAVRRSLQDAGFTLRSFVT

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=237, Percent_Identity=40.9282700421941, Blast_Score=163, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 24297; Mature: 24166

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPRIDLNADLGEEITDDAALLAVVTSANVACGYHAGSRAVMRAVCAEAVRREVSLGAQ
CCCCCCCCCCCCCCHHHCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCE
VSYDDRENFGRVPLSVSYDVLREHVADQVGVLSEIATAEGTAVRYLKPHGALYHRVLDDE
ECCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH
VQARAVLDGSGGLPVLGMPGALLRLAEAAGRAVFREGFPDRGYAADGRLLPRSAPGALVE
HHHEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCHHH
DTDRVVAQAVALAARVDSVCLHGDSPGAVGHALAVRRSLQDAGFTLRSFVT
HHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHCC
>Mature Secondary Structure 
ARPRIDLNADLGEEITDDAALLAVVTSANVACGYHAGSRAVMRAVCAEAVRREVSLGAQ
CCCCCCCCCCCCCHHHCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCE
VSYDDRENFGRVPLSVSYDVLREHVADQVGVLSEIATAEGTAVRYLKPHGALYHRVLDDE
ECCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH
VQARAVLDGSGGLPVLGMPGALLRLAEAAGRAVFREGFPDRGYAADGRLLPRSAPGALVE
HHHEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCHHH
DTDRVVAQAVALAARVDSVCLHGDSPGAVGHALAVRRSLQDAGFTLRSFVT
HHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572948; 12692562 [H]