Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119716611
Identifier: 119716611
GI number: 119716611
Start: 2539517
End: 2540512
Strand: Reverse
Name: 119716611
Synonym: Noca_2384
Alternate gene names: NA
Gene position: 2540512-2539517 (Counterclockwise)
Preceding gene: 119716621
Following gene: 119716602
Centisome position: 50.95
GC content: 71.49
Gene sequence:
>996_bases ATGTTCGATCGATACCCCCTCCTGCATCCGGACCGGCACGGTCTGATCACCCGCCGTGGGGCGAGGGCCGCCGGGCTCGA CGATGCCGACCTGCGACACCTGGTGAAGCACGGCCGGCTGATCCGGATGCGGCGCGGGGTGTTCGTCGAGGCGGAGCACT GGAACATGCTCGACGAGTTCCGTGGCCGCCCCCTGCTGCGGGTCCGGGCCGCACAGGAATCTCTGCAGCGCGACCACGTG CTGAGCCACGACTCGGCGGCCTTGGTGCTCGAGCTCGGGTGCCCGGACCCCCGGACGGCGCTCGTCCACGTCACCCGCCC CAAAGTCCACGGTGACGCAGACCGCGCCGGCATCAAGCATCACCTCGCGCCGTACTCCGCCGACCAGGTGCTGGTGGTCG ACGGCCTGCAGGTCCTTGACCCGGCGCGCACCGCGCTCGACATGGCGCGCGAGCACGGGCTGGTCGCCGGTGTCGCGTGC TGCGACGCCGCGCTCCGCCGCGGCGCCACCTGCACCGATCTCGACCGGGCCCGTCAGGCGATGCGCTGCTGGCCTGGCAG CCGAGTGATGGACGCTGCCGTCAGGCTCGCCGATCGCGGCGCCGAGTCGTGGTTGGAGTCCGAGGCTCGGGTCTTCGTGA CCTCGCTCGGCATCGGCCGCCCCCAGACCCAGTTCGGGTTGACCGACGGCAGCCGCACGGTCTGGTGCGACATGAGGGTC GGCCGTCACATCTTCGAGGCGGACGGACGACTCAAGTACACGGCCGCCAACGCGCTCGGCCAGGACCCGGAGGCGGTGCT CTGGAACGAGAAGGAGCGTCAGGACTTCATCCTCGGCTTCAAACTCGGGGTCTCCAGAATCACGGCCTTCGACTGCCGCG CCGGGGCGCGGGCCGCCCGCCAGCGGCTGCTGCGGGAGCACGCCGACACCTGTGCCCGCTTCGGCACCGACATCAGCGAC CTCGCGCCGTACGTCGTCCGTCGGACCGGGCCCTGA
Upstream 100 bases:
>100_bases GCGCCCGCCGGACGTCCACATCGACCGGGCGATCCAGGTTCTCCACAGCCGCGCAATCCGCCGATGCAAGCGCCCCCCGG CTTGGGCGAGCCTCTCCGGC
Downstream 100 bases:
>100_bases GCGACCACCGCGAGCTGTAACGCCCGTTTACCCCAGCTAGCCACCGTGTTGCAGCAGGGTCGGCACAAGGGGTAACCCGG CGTTACAGCGAACGGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MFDRYPLLHPDRHGLITRRGARAAGLDDADLRHLVKHGRLIRMRRGVFVEAEHWNMLDEFRGRPLLRVRAAQESLQRDHV LSHDSAALVLELGCPDPRTALVHVTRPKVHGDADRAGIKHHLAPYSADQVLVVDGLQVLDPARTALDMAREHGLVAGVAC CDAALRRGATCTDLDRARQAMRCWPGSRVMDAAVRLADRGAESWLESEARVFVTSLGIGRPQTQFGLTDGSRTVWCDMRV GRHIFEADGRLKYTAANALGQDPEAVLWNEKERQDFILGFKLGVSRITAFDCRAGARAARQRLLREHADTCARFGTDISD LAPYVVRRTGP
Sequences:
>Translated_331_residues MFDRYPLLHPDRHGLITRRGARAAGLDDADLRHLVKHGRLIRMRRGVFVEAEHWNMLDEFRGRPLLRVRAAQESLQRDHV LSHDSAALVLELGCPDPRTALVHVTRPKVHGDADRAGIKHHLAPYSADQVLVVDGLQVLDPARTALDMAREHGLVAGVAC CDAALRRGATCTDLDRARQAMRCWPGSRVMDAAVRLADRGAESWLESEARVFVTSLGIGRPQTQFGLTDGSRTVWCDMRV GRHIFEADGRLKYTAANALGQDPEAVLWNEKERQDFILGFKLGVSRITAFDCRAGARAARQRLLREHADTCARFGTDISD LAPYVVRRTGP >Mature_331_residues MFDRYPLLHPDRHGLITRRGARAAGLDDADLRHLVKHGRLIRMRRGVFVEAEHWNMLDEFRGRPLLRVRAAQESLQRDHV LSHDSAALVLELGCPDPRTALVHVTRPKVHGDADRAGIKHHLAPYSADQVLVVDGLQVLDPARTALDMAREHGLVAGVAC CDAALRRGATCTDLDRARQAMRCWPGSRVMDAAVRLADRGAESWLESEARVFVTSLGIGRPQTQFGLTDGSRTVWCDMRV GRHIFEADGRLKYTAANALGQDPEAVLWNEKERQDFILGFKLGVSRITAFDCRAGARAARQRLLREHADTCARFGTDISD LAPYVVRRTGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36868; Mature: 36868
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDRYPLLHPDRHGLITRRGARAAGLDDADLRHLVKHGRLIRMRRGVFVEAEHWNMLDEF CCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCEEEEECCEEEEEHHCCHHHHH RGRPLLRVRAAQESLQRDHVLSHDSAALVLELGCPDPRTALVHVTRPKVHGDADRAGIKH CCCCEEEHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCHHHCHHH HLAPYSADQVLVVDGLQVLDPARTALDMAREHGLVAGVACCDAALRRGATCTDLDRARQA HCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHH MRCWPGSRVMDAAVRLADRGAESWLESEARVFVTSLGIGRPQTQFGLTDGSRTVWCDMRV HHCCCCCHHHHHHHHHHHCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEHHH GRHIFEADGRLKYTAANALGQDPEAVLWNEKERQDFILGFKLGVSRITAFDCRAGARAAR CCHHHHCCCEEEEEEHHHCCCCCCEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHH QRLLREHADTCARFGTDISDLAPYVVRRTGP HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC >Mature Secondary Structure MFDRYPLLHPDRHGLITRRGARAAGLDDADLRHLVKHGRLIRMRRGVFVEAEHWNMLDEF CCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCEEEEECCEEEEEHHCCHHHHH RGRPLLRVRAAQESLQRDHVLSHDSAALVLELGCPDPRTALVHVTRPKVHGDADRAGIKH CCCCEEEHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCHHHCHHH HLAPYSADQVLVVDGLQVLDPARTALDMAREHGLVAGVACCDAALRRGATCTDLDRARQA HCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHH MRCWPGSRVMDAAVRLADRGAESWLESEARVFVTSLGIGRPQTQFGLTDGSRTVWCDMRV HHCCCCCHHHHHHHHHHHCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEHHH GRHIFEADGRLKYTAANALGQDPEAVLWNEKERQDFILGFKLGVSRITAFDCRAGARAAR CCHHHHCCCEEEEEEHHHCCCCCCEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHH QRLLREHADTCARFGTDISDLAPYVVRRTGP HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA