Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716611

Identifier: 119716611

GI number: 119716611

Start: 2539517

End: 2540512

Strand: Reverse

Name: 119716611

Synonym: Noca_2384

Alternate gene names: NA

Gene position: 2540512-2539517 (Counterclockwise)

Preceding gene: 119716621

Following gene: 119716602

Centisome position: 50.95

GC content: 71.49

Gene sequence:

>996_bases
ATGTTCGATCGATACCCCCTCCTGCATCCGGACCGGCACGGTCTGATCACCCGCCGTGGGGCGAGGGCCGCCGGGCTCGA
CGATGCCGACCTGCGACACCTGGTGAAGCACGGCCGGCTGATCCGGATGCGGCGCGGGGTGTTCGTCGAGGCGGAGCACT
GGAACATGCTCGACGAGTTCCGTGGCCGCCCCCTGCTGCGGGTCCGGGCCGCACAGGAATCTCTGCAGCGCGACCACGTG
CTGAGCCACGACTCGGCGGCCTTGGTGCTCGAGCTCGGGTGCCCGGACCCCCGGACGGCGCTCGTCCACGTCACCCGCCC
CAAAGTCCACGGTGACGCAGACCGCGCCGGCATCAAGCATCACCTCGCGCCGTACTCCGCCGACCAGGTGCTGGTGGTCG
ACGGCCTGCAGGTCCTTGACCCGGCGCGCACCGCGCTCGACATGGCGCGCGAGCACGGGCTGGTCGCCGGTGTCGCGTGC
TGCGACGCCGCGCTCCGCCGCGGCGCCACCTGCACCGATCTCGACCGGGCCCGTCAGGCGATGCGCTGCTGGCCTGGCAG
CCGAGTGATGGACGCTGCCGTCAGGCTCGCCGATCGCGGCGCCGAGTCGTGGTTGGAGTCCGAGGCTCGGGTCTTCGTGA
CCTCGCTCGGCATCGGCCGCCCCCAGACCCAGTTCGGGTTGACCGACGGCAGCCGCACGGTCTGGTGCGACATGAGGGTC
GGCCGTCACATCTTCGAGGCGGACGGACGACTCAAGTACACGGCCGCCAACGCGCTCGGCCAGGACCCGGAGGCGGTGCT
CTGGAACGAGAAGGAGCGTCAGGACTTCATCCTCGGCTTCAAACTCGGGGTCTCCAGAATCACGGCCTTCGACTGCCGCG
CCGGGGCGCGGGCCGCCCGCCAGCGGCTGCTGCGGGAGCACGCCGACACCTGTGCCCGCTTCGGCACCGACATCAGCGAC
CTCGCGCCGTACGTCGTCCGTCGGACCGGGCCCTGA

Upstream 100 bases:

>100_bases
GCGCCCGCCGGACGTCCACATCGACCGGGCGATCCAGGTTCTCCACAGCCGCGCAATCCGCCGATGCAAGCGCCCCCCGG
CTTGGGCGAGCCTCTCCGGC

Downstream 100 bases:

>100_bases
GCGACCACCGCGAGCTGTAACGCCCGTTTACCCCAGCTAGCCACCGTGTTGCAGCAGGGTCGGCACAAGGGGTAACCCGG
CGTTACAGCGAACGGCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MFDRYPLLHPDRHGLITRRGARAAGLDDADLRHLVKHGRLIRMRRGVFVEAEHWNMLDEFRGRPLLRVRAAQESLQRDHV
LSHDSAALVLELGCPDPRTALVHVTRPKVHGDADRAGIKHHLAPYSADQVLVVDGLQVLDPARTALDMAREHGLVAGVAC
CDAALRRGATCTDLDRARQAMRCWPGSRVMDAAVRLADRGAESWLESEARVFVTSLGIGRPQTQFGLTDGSRTVWCDMRV
GRHIFEADGRLKYTAANALGQDPEAVLWNEKERQDFILGFKLGVSRITAFDCRAGARAARQRLLREHADTCARFGTDISD
LAPYVVRRTGP

Sequences:

>Translated_331_residues
MFDRYPLLHPDRHGLITRRGARAAGLDDADLRHLVKHGRLIRMRRGVFVEAEHWNMLDEFRGRPLLRVRAAQESLQRDHV
LSHDSAALVLELGCPDPRTALVHVTRPKVHGDADRAGIKHHLAPYSADQVLVVDGLQVLDPARTALDMAREHGLVAGVAC
CDAALRRGATCTDLDRARQAMRCWPGSRVMDAAVRLADRGAESWLESEARVFVTSLGIGRPQTQFGLTDGSRTVWCDMRV
GRHIFEADGRLKYTAANALGQDPEAVLWNEKERQDFILGFKLGVSRITAFDCRAGARAARQRLLREHADTCARFGTDISD
LAPYVVRRTGP
>Mature_331_residues
MFDRYPLLHPDRHGLITRRGARAAGLDDADLRHLVKHGRLIRMRRGVFVEAEHWNMLDEFRGRPLLRVRAAQESLQRDHV
LSHDSAALVLELGCPDPRTALVHVTRPKVHGDADRAGIKHHLAPYSADQVLVVDGLQVLDPARTALDMAREHGLVAGVAC
CDAALRRGATCTDLDRARQAMRCWPGSRVMDAAVRLADRGAESWLESEARVFVTSLGIGRPQTQFGLTDGSRTVWCDMRV
GRHIFEADGRLKYTAANALGQDPEAVLWNEKERQDFILGFKLGVSRITAFDCRAGARAARQRLLREHADTCARFGTDISD
LAPYVVRRTGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36868; Mature: 36868

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDRYPLLHPDRHGLITRRGARAAGLDDADLRHLVKHGRLIRMRRGVFVEAEHWNMLDEF
CCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCEEEEECCEEEEEHHCCHHHHH
RGRPLLRVRAAQESLQRDHVLSHDSAALVLELGCPDPRTALVHVTRPKVHGDADRAGIKH
CCCCEEEHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCHHHCHHH
HLAPYSADQVLVVDGLQVLDPARTALDMAREHGLVAGVACCDAALRRGATCTDLDRARQA
HCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHH
MRCWPGSRVMDAAVRLADRGAESWLESEARVFVTSLGIGRPQTQFGLTDGSRTVWCDMRV
HHCCCCCHHHHHHHHHHHCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEHHH
GRHIFEADGRLKYTAANALGQDPEAVLWNEKERQDFILGFKLGVSRITAFDCRAGARAAR
CCHHHHCCCEEEEEEHHHCCCCCCEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHH
QRLLREHADTCARFGTDISDLAPYVVRRTGP
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MFDRYPLLHPDRHGLITRRGARAAGLDDADLRHLVKHGRLIRMRRGVFVEAEHWNMLDEF
CCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCEEEEECCEEEEEHHCCHHHHH
RGRPLLRVRAAQESLQRDHVLSHDSAALVLELGCPDPRTALVHVTRPKVHGDADRAGIKH
CCCCEEEHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCHHHCHHH
HLAPYSADQVLVVDGLQVLDPARTALDMAREHGLVAGVACCDAALRRGATCTDLDRARQA
HCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHH
MRCWPGSRVMDAAVRLADRGAESWLESEARVFVTSLGIGRPQTQFGLTDGSRTVWCDMRV
HHCCCCCHHHHHHHHHHHCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEHHH
GRHIFEADGRLKYTAANALGQDPEAVLWNEKERQDFILGFKLGVSRITAFDCRAGARAAR
CCHHHHCCCEEEEEEHHHCCCCCCEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHH
QRLLREHADTCARFGTDISDLAPYVVRRTGP
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA