Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119716621
Identifier: 119716621
GI number: 119716621
Start: 2550434
End: 2551663
Strand: Reverse
Name: 119716621
Synonym: Noca_2394
Alternate gene names: NA
Gene position: 2551663-2550434 (Counterclockwise)
Preceding gene: 119716680
Following gene: 119716611
Centisome position: 51.18
GC content: 72.52
Gene sequence:
>1230_bases GTGGTGACTAGCCATCAGTGGGGCCGAGTAGACGACGACGGCACCGTCTACGTCAGGACCGCCGACGGGGAGCGTCCCGT CGGCCAGTACCCCGAGGGCACCCCAGCTGAGGCACTGAAGTTCTTCACCGAGCGCTTCGACGCACTCGCGTTCGAGGTGG AGCTGCTCGAGAAGCGGGTCCAGTCCGGGGTGATGTCGCCGGACGAGGCCACCGCGTCCGTGCGCACGGTGCGCACCCAG GTCGAGGAGGCGCACGCAGTCGGCGACCTCGCCGCCCTCGTGGCGCGCCTGGACGCGCTCGGTCCGGTGCTCGAGGTGCA GCGCGAGGCCCGCAAGGCCGAGCGGGCACAGCGATCCGCCGAGTCCCGCGCCAGCAAGGAGCGGATCGTCACCGAGGCGG AGCAGCTCGCCGAGGGCTCCGACTGGCGCAACGGCGCCAACCGGATGCGCGAGCTGCTCGACGAGTGGAAGGCGCTGCCG CGGATCGACCGGTCGTCCGACGACGCGCTCTGGCGCCGGTTCTCCACCGCGCGCACGGCGTACACCCGGCGCCGCAAGGC GCACTTCGCCGAGCAGCACGAGAAGCGAGACACCGCCCGGGTGGTCAAGGAGCGGCTGGCCGCGGAGGCCGAGGAGCTCG CCACCTCCACGGAGTGGGGTCCCACCGCCGGCCGGTACCGCGACCTGATGCGCCAGTGGAAGGCCGCCGGCCCCGCGCCC CGCGACGTCGACGACGCGCTCTGGAAGCGCTTCCGCGGTGCCCAGGACGCCTTCTTCGGTGCGCGCGACGCCGCCGCGGC CGAGCAGGACCAGGAGTTCGCCGCCAACGCGCAGGTGAAGGAGCAGCTGCTCACCGAGGCCGAGGCGCTGGTGCCCGTCA CCGACCTGGAGGCTGCCAAGCGGACCTTCCGCGACATCGCGGAGCGGTGGGACGCCGCCGGCAAGGTCCCCCGCGACCGG ATGAAGGAGCTCGAGGGCCGGATCCGCAAGGTCGAGCAGGAGATCCGCGGCGTCGAGGAGGACCAGTGGCGCCGCTCGGA CCCGGAGAAGTCCGCCCGCGCCGACGACATGGTCTCCAAGCTCGAGGCCGCGATCGCCCAGGTCGAGGCCGACCTCGAGA AGGCGCGCGCCGCCGGCAACGAGCGCAAGATCAAGGAGCTGGAGGAGAACCTCGCCTCCCGGCAGATGTTCCTCGAGACC GCCAAGCGGGCCAGCGCCGACTTCAGCTGA
Upstream 100 bases:
>100_bases CCGCGGGCGGTCGATCCGGCTTCATGACTAGCATGGGCTCCTGCGCGCCGCCGCCGGCGGACGTCGATCGCATATCGCAC TTCGAGGGAACCGGGACAAC
Downstream 100 bases:
>100_bases GCGGCCCGGCCGGGCCCCGTCGCCCTACCTGACGCCCCGCAGGTCGTCGAGCCGGTCGCGCAGCGCCCGCAGCTCCTGCC CGCTCAGGCGGGGCGCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: ATPase; Methyl-Accepting Chemotaxis Protein; DNA Repair ATPase
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MVTSHQWGRVDDDGTVYVRTADGERPVGQYPEGTPAEALKFFTERFDALAFEVELLEKRVQSGVMSPDEATASVRTVRTQ VEEAHAVGDLAALVARLDALGPVLEVQREARKAERAQRSAESRASKERIVTEAEQLAEGSDWRNGANRMRELLDEWKALP RIDRSSDDALWRRFSTARTAYTRRRKAHFAEQHEKRDTARVVKERLAAEAEELATSTEWGPTAGRYRDLMRQWKAAGPAP RDVDDALWKRFRGAQDAFFGARDAAAAEQDQEFAANAQVKEQLLTEAEALVPVTDLEAAKRTFRDIAERWDAAGKVPRDR MKELEGRIRKVEQEIRGVEEDQWRRSDPEKSARADDMVSKLEAAIAQVEADLEKARAAGNERKIKELEENLASRQMFLET AKRASADFS
Sequences:
>Translated_409_residues MVTSHQWGRVDDDGTVYVRTADGERPVGQYPEGTPAEALKFFTERFDALAFEVELLEKRVQSGVMSPDEATASVRTVRTQ VEEAHAVGDLAALVARLDALGPVLEVQREARKAERAQRSAESRASKERIVTEAEQLAEGSDWRNGANRMRELLDEWKALP RIDRSSDDALWRRFSTARTAYTRRRKAHFAEQHEKRDTARVVKERLAAEAEELATSTEWGPTAGRYRDLMRQWKAAGPAP RDVDDALWKRFRGAQDAFFGARDAAAAEQDQEFAANAQVKEQLLTEAEALVPVTDLEAAKRTFRDIAERWDAAGKVPRDR MKELEGRIRKVEQEIRGVEEDQWRRSDPEKSARADDMVSKLEAAIAQVEADLEKARAAGNERKIKELEENLASRQMFLET AKRASADFS >Mature_409_residues MVTSHQWGRVDDDGTVYVRTADGERPVGQYPEGTPAEALKFFTERFDALAFEVELLEKRVQSGVMSPDEATASVRTVRTQ VEEAHAVGDLAALVARLDALGPVLEVQREARKAERAQRSAESRASKERIVTEAEQLAEGSDWRNGANRMRELLDEWKALP RIDRSSDDALWRRFSTARTAYTRRRKAHFAEQHEKRDTARVVKERLAAEAEELATSTEWGPTAGRYRDLMRQWKAAGPAP RDVDDALWKRFRGAQDAFFGARDAAAAEQDQEFAANAQVKEQLLTEAEALVPVTDLEAAKRTFRDIAERWDAAGKVPRDR MKELEGRIRKVEQEIRGVEEDQWRRSDPEKSARADDMVSKLEAAIAQVEADLEKARAAGNERKIKELEENLASRQMFLET AKRASADFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46238; Mature: 46238
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTSHQWGRVDDDGTVYVRTADGERPVGQYPEGTPAEALKFFTERFDALAFEVELLEKRV CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QSGVMSPDEATASVRTVRTQVEEAHAVGDLAALVARLDALGPVLEVQREARKAERAQRSA HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESRASKERIVTEAEQLAEGSDWRNGANRMRELLDEWKALPRIDRSSDDALWRRFSTARTA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH YTRRRKAHFAEQHEKRDTARVVKERLAAEAEELATSTEWGPTAGRYRDLMRQWKAAGPAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCC RDVDDALWKRFRGAQDAFFGARDAAAAEQDQEFAANAQVKEQLLTEAEALVPVTDLEAAK CCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH RTFRDIAERWDAAGKVPRDRMKELEGRIRKVEQEIRGVEEDQWRRSDPEKSARADDMVSK HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHH LEAAIAQVEADLEKARAAGNERKIKELEENLASRQMFLETAKRASADFS HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVTSHQWGRVDDDGTVYVRTADGERPVGQYPEGTPAEALKFFTERFDALAFEVELLEKRV CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QSGVMSPDEATASVRTVRTQVEEAHAVGDLAALVARLDALGPVLEVQREARKAERAQRSA HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESRASKERIVTEAEQLAEGSDWRNGANRMRELLDEWKALPRIDRSSDDALWRRFSTARTA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH YTRRRKAHFAEQHEKRDTARVVKERLAAEAEELATSTEWGPTAGRYRDLMRQWKAAGPAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCC RDVDDALWKRFRGAQDAFFGARDAAAAEQDQEFAANAQVKEQLLTEAEALVPVTDLEAAK CCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH RTFRDIAERWDAAGKVPRDRMKELEGRIRKVEQEIRGVEEDQWRRSDPEKSARADDMVSK HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHH LEAAIAQVEADLEKARAAGNERKIKELEENLASRQMFLETAKRASADFS HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA