Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119716593
Identifier: 119716593
GI number: 119716593
Start: 2521860
End: 2523098
Strand: Reverse
Name: 119716593
Synonym: Noca_2366
Alternate gene names: NA
Gene position: 2523098-2521860 (Counterclockwise)
Preceding gene: 119716595
Following gene: 119716590
Centisome position: 50.6
GC content: 67.31
Gene sequence:
>1239_bases ATGGAAGTGATCCACGTCCGGTGTGCGGGCATGGACGTGTCGAAGAAGGACGCCAAGGTCTGCGTCCGACATGCGGGAGC AGGTCGGCGCAAGACCGTGGAAACGGTCACGACCTGGACCTCAATGACCGGCCAGATCCTGGCGCTGCGCGAGCATCTGA TCGCCGAGCAGGTCACGTGTGTGGTGATGGAGGCAACCGGTGACTACTGGAAGCCGTTCTACTACCTGCTCGAAGACCTG CCCGGTGTCGAGGTGATGCTGGTCAACGCCCGCCATGTCAAGACCCTGCCGGGACGCAAGAGCGACGTCGCCGACGCGAC CTGGCTGGCCCAGCTCGGTGCGCACGGCCTGGTCCGGGCCTCGTTCGTGCCACCCGAACCGATCCGGCAACTGCGGGACC TGACCCGGGCACGGACCGCGATCACCCGCGAACGTGGCCGGGAGGTCCAACGGCTGGAGAAGCTGCTGGAGGACGCCGGG ATCAAGCTGTCCGCGGTCGCCTCCGACATCATGGGCGTCTCAGGACGGGCCATGCTCGAAGCGCTGATCGCCGGCGACCG CGATCCCGCCGGGCTTGCCGACCTGGCCAGGCGTCGACTGCGGTCCAAGATCCCTGAACTGACCGAAGCGCTCGCTGGCC GGTTCACCGAACACCACGCGTTCCTCGCCCGGGTCCACCTGGATCTCATCGACCGACACACCGCCGCCGTCGAGCAGTTG ACTGAGCGGATCGAGGTGGTGATCGAGCCGTTTCAGGGCTTCCACGACCTGATCTGCACGATCCCGGGAATCTCCACGAT CACCGCCGACATCATCACCGCCGAGACCGGCGCGGACATGACCCGGTTCCCCACTGCCAAGCACCTCGCCTCTTGGGCCG GGACCACACCCGGCAGCAACGAGTCCGCCGGGAAGGTGAAGTCCTCACGGACCAGGCCCGGGAACCCCTACCTGCAGGGC GCACTCGGGGCGGCCGCGATGGCGTGCTCACAGAACCGGACCACCTACCTCGGCGCGCGCTACCGGCGGATCGCCAGCCG GCGCGGCCCGCTGAAGGCCAACGTCGCGATCCAGCACTCCATGCTCATCGCGATCTGGCACATGGGCACCACCGGCACCC TCTACGACGACCCTGGAGGCGAGTTCTTCAACCGCCTCCACCCCGACCGCACCAAGATGCGAGCCATCAGCCAGCTCGAA GCCATGGGCTACCGCGTCACCCTCGACCACGCGAGCTGA
Upstream 100 bases:
>100_bases AACCGTGGATTGGTGCCAGCGAGCCCGAGCGTCAGACTTTCGAATCTCCCTGCCCTCCTCACGACGGACGCCTGGATCCG ATCGCGAGGAGGAGATGGCC
Downstream 100 bases:
>100_bases AGACCTCTGACGCGAAGGCCCACCCGCTGGGGTGAATCTTCGCGTCAGAGGCCCTTTCGAGGGTCTCTTTCCATTTCGGG GAACCTGCGAGGAGCAAGCA
Product: transposase IS116/IS110/IS902 family protein
Products: NA
Alternate protein names: ISPpu9 Transposase; LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives; Pyruvate Water Dikinase; Transposon; ISAfe3 Transposase; Phosphoenolpyruvate Synthase; Transposase For Insertion Sequences
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MEVIHVRCAGMDVSKKDAKVCVRHAGAGRRKTVETVTTWTSMTGQILALREHLIAEQVTCVVMEATGDYWKPFYYLLEDL PGVEVMLVNARHVKTLPGRKSDVADATWLAQLGAHGLVRASFVPPEPIRQLRDLTRARTAITRERGREVQRLEKLLEDAG IKLSAVASDIMGVSGRAMLEALIAGDRDPAGLADLARRRLRSKIPELTEALAGRFTEHHAFLARVHLDLIDRHTAAVEQL TERIEVVIEPFQGFHDLICTIPGISTITADIITAETGADMTRFPTAKHLASWAGTTPGSNESAGKVKSSRTRPGNPYLQG ALGAAAMACSQNRTTYLGARYRRIASRRGPLKANVAIQHSMLIAIWHMGTTGTLYDDPGGEFFNRLHPDRTKMRAISQLE AMGYRVTLDHAS
Sequences:
>Translated_412_residues MEVIHVRCAGMDVSKKDAKVCVRHAGAGRRKTVETVTTWTSMTGQILALREHLIAEQVTCVVMEATGDYWKPFYYLLEDL PGVEVMLVNARHVKTLPGRKSDVADATWLAQLGAHGLVRASFVPPEPIRQLRDLTRARTAITRERGREVQRLEKLLEDAG IKLSAVASDIMGVSGRAMLEALIAGDRDPAGLADLARRRLRSKIPELTEALAGRFTEHHAFLARVHLDLIDRHTAAVEQL TERIEVVIEPFQGFHDLICTIPGISTITADIITAETGADMTRFPTAKHLASWAGTTPGSNESAGKVKSSRTRPGNPYLQG ALGAAAMACSQNRTTYLGARYRRIASRRGPLKANVAIQHSMLIAIWHMGTTGTLYDDPGGEFFNRLHPDRTKMRAISQLE AMGYRVTLDHAS >Mature_412_residues MEVIHVRCAGMDVSKKDAKVCVRHAGAGRRKTVETVTTWTSMTGQILALREHLIAEQVTCVVMEATGDYWKPFYYLLEDL PGVEVMLVNARHVKTLPGRKSDVADATWLAQLGAHGLVRASFVPPEPIRQLRDLTRARTAITRERGREVQRLEKLLEDAG IKLSAVASDIMGVSGRAMLEALIAGDRDPAGLADLARRRLRSKIPELTEALAGRFTEHHAFLARVHLDLIDRHTAAVEQL TERIEVVIEPFQGFHDLICTIPGISTITADIITAETGADMTRFPTAKHLASWAGTTPGSNESAGKVKSSRTRPGNPYLQG ALGAAAMACSQNRTTYLGARYRRIASRRGPLKANVAIQHSMLIAIWHMGTTGTLYDDPGGEFFNRLHPDRTKMRAISQLE AMGYRVTLDHAS
Specific function: Unknown
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45297; Mature: 45297
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVIHVRCAGMDVSKKDAKVCVRHAGAGRRKTVETVTTWTSMTGQILALREHLIAEQVTC CCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE VVMEATGDYWKPFYYLLEDLPGVEVMLVNARHVKTLPGRKSDVADATWLAQLGAHGLVRA EEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEE SFVPPEPIRQLRDLTRARTAITRERGREVQRLEKLLEDAGIKLSAVASDIMGVSGRAMLE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHCCCHHHHHH ALIAGDRDPAGLADLARRRLRSKIPELTEALAGRFTEHHAFLARVHLDLIDRHTAAVEQL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TERIEVVIEPFQGFHDLICTIPGISTITADIITAETGADMTRFPTAKHLASWAGTTPGSN HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEECCCCCCHHCCCHHHHHHHCCCCCCCC ESAGKVKSSRTRPGNPYLQGALGAAAMACSQNRTTYLGARYRRIASRRGPLKANVAIQHS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEECEEEHHH MLIAIWHMGTTGTLYDDPGGEFFNRLHPDRTKMRAISQLEAMGYRVTLDHAS EEEEEEECCCCCCEEECCCHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCC >Mature Secondary Structure MEVIHVRCAGMDVSKKDAKVCVRHAGAGRRKTVETVTTWTSMTGQILALREHLIAEQVTC CCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE VVMEATGDYWKPFYYLLEDLPGVEVMLVNARHVKTLPGRKSDVADATWLAQLGAHGLVRA EEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEE SFVPPEPIRQLRDLTRARTAITRERGREVQRLEKLLEDAGIKLSAVASDIMGVSGRAMLE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHCCCHHHHHH ALIAGDRDPAGLADLARRRLRSKIPELTEALAGRFTEHHAFLARVHLDLIDRHTAAVEQL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TERIEVVIEPFQGFHDLICTIPGISTITADIITAETGADMTRFPTAKHLASWAGTTPGSN HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEECCCCCCHHCCCHHHHHHHCCCCCCCC ESAGKVKSSRTRPGNPYLQGALGAAAMACSQNRTTYLGARYRRIASRRGPLKANVAIQHS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEECEEEHHH MLIAIWHMGTTGTLYDDPGGEFFNRLHPDRTKMRAISQLEAMGYRVTLDHAS EEEEEEECCCCCCEEECCCHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA