Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716593

Identifier: 119716593

GI number: 119716593

Start: 2521860

End: 2523098

Strand: Reverse

Name: 119716593

Synonym: Noca_2366

Alternate gene names: NA

Gene position: 2523098-2521860 (Counterclockwise)

Preceding gene: 119716595

Following gene: 119716590

Centisome position: 50.6

GC content: 67.31

Gene sequence:

>1239_bases
ATGGAAGTGATCCACGTCCGGTGTGCGGGCATGGACGTGTCGAAGAAGGACGCCAAGGTCTGCGTCCGACATGCGGGAGC
AGGTCGGCGCAAGACCGTGGAAACGGTCACGACCTGGACCTCAATGACCGGCCAGATCCTGGCGCTGCGCGAGCATCTGA
TCGCCGAGCAGGTCACGTGTGTGGTGATGGAGGCAACCGGTGACTACTGGAAGCCGTTCTACTACCTGCTCGAAGACCTG
CCCGGTGTCGAGGTGATGCTGGTCAACGCCCGCCATGTCAAGACCCTGCCGGGACGCAAGAGCGACGTCGCCGACGCGAC
CTGGCTGGCCCAGCTCGGTGCGCACGGCCTGGTCCGGGCCTCGTTCGTGCCACCCGAACCGATCCGGCAACTGCGGGACC
TGACCCGGGCACGGACCGCGATCACCCGCGAACGTGGCCGGGAGGTCCAACGGCTGGAGAAGCTGCTGGAGGACGCCGGG
ATCAAGCTGTCCGCGGTCGCCTCCGACATCATGGGCGTCTCAGGACGGGCCATGCTCGAAGCGCTGATCGCCGGCGACCG
CGATCCCGCCGGGCTTGCCGACCTGGCCAGGCGTCGACTGCGGTCCAAGATCCCTGAACTGACCGAAGCGCTCGCTGGCC
GGTTCACCGAACACCACGCGTTCCTCGCCCGGGTCCACCTGGATCTCATCGACCGACACACCGCCGCCGTCGAGCAGTTG
ACTGAGCGGATCGAGGTGGTGATCGAGCCGTTTCAGGGCTTCCACGACCTGATCTGCACGATCCCGGGAATCTCCACGAT
CACCGCCGACATCATCACCGCCGAGACCGGCGCGGACATGACCCGGTTCCCCACTGCCAAGCACCTCGCCTCTTGGGCCG
GGACCACACCCGGCAGCAACGAGTCCGCCGGGAAGGTGAAGTCCTCACGGACCAGGCCCGGGAACCCCTACCTGCAGGGC
GCACTCGGGGCGGCCGCGATGGCGTGCTCACAGAACCGGACCACCTACCTCGGCGCGCGCTACCGGCGGATCGCCAGCCG
GCGCGGCCCGCTGAAGGCCAACGTCGCGATCCAGCACTCCATGCTCATCGCGATCTGGCACATGGGCACCACCGGCACCC
TCTACGACGACCCTGGAGGCGAGTTCTTCAACCGCCTCCACCCCGACCGCACCAAGATGCGAGCCATCAGCCAGCTCGAA
GCCATGGGCTACCGCGTCACCCTCGACCACGCGAGCTGA

Upstream 100 bases:

>100_bases
AACCGTGGATTGGTGCCAGCGAGCCCGAGCGTCAGACTTTCGAATCTCCCTGCCCTCCTCACGACGGACGCCTGGATCCG
ATCGCGAGGAGGAGATGGCC

Downstream 100 bases:

>100_bases
AGACCTCTGACGCGAAGGCCCACCCGCTGGGGTGAATCTTCGCGTCAGAGGCCCTTTCGAGGGTCTCTTTCCATTTCGGG
GAACCTGCGAGGAGCAAGCA

Product: transposase IS116/IS110/IS902 family protein

Products: NA

Alternate protein names: ISPpu9 Transposase; LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives; Pyruvate Water Dikinase; Transposon; ISAfe3 Transposase; Phosphoenolpyruvate Synthase; Transposase For Insertion Sequences

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MEVIHVRCAGMDVSKKDAKVCVRHAGAGRRKTVETVTTWTSMTGQILALREHLIAEQVTCVVMEATGDYWKPFYYLLEDL
PGVEVMLVNARHVKTLPGRKSDVADATWLAQLGAHGLVRASFVPPEPIRQLRDLTRARTAITRERGREVQRLEKLLEDAG
IKLSAVASDIMGVSGRAMLEALIAGDRDPAGLADLARRRLRSKIPELTEALAGRFTEHHAFLARVHLDLIDRHTAAVEQL
TERIEVVIEPFQGFHDLICTIPGISTITADIITAETGADMTRFPTAKHLASWAGTTPGSNESAGKVKSSRTRPGNPYLQG
ALGAAAMACSQNRTTYLGARYRRIASRRGPLKANVAIQHSMLIAIWHMGTTGTLYDDPGGEFFNRLHPDRTKMRAISQLE
AMGYRVTLDHAS

Sequences:

>Translated_412_residues
MEVIHVRCAGMDVSKKDAKVCVRHAGAGRRKTVETVTTWTSMTGQILALREHLIAEQVTCVVMEATGDYWKPFYYLLEDL
PGVEVMLVNARHVKTLPGRKSDVADATWLAQLGAHGLVRASFVPPEPIRQLRDLTRARTAITRERGREVQRLEKLLEDAG
IKLSAVASDIMGVSGRAMLEALIAGDRDPAGLADLARRRLRSKIPELTEALAGRFTEHHAFLARVHLDLIDRHTAAVEQL
TERIEVVIEPFQGFHDLICTIPGISTITADIITAETGADMTRFPTAKHLASWAGTTPGSNESAGKVKSSRTRPGNPYLQG
ALGAAAMACSQNRTTYLGARYRRIASRRGPLKANVAIQHSMLIAIWHMGTTGTLYDDPGGEFFNRLHPDRTKMRAISQLE
AMGYRVTLDHAS
>Mature_412_residues
MEVIHVRCAGMDVSKKDAKVCVRHAGAGRRKTVETVTTWTSMTGQILALREHLIAEQVTCVVMEATGDYWKPFYYLLEDL
PGVEVMLVNARHVKTLPGRKSDVADATWLAQLGAHGLVRASFVPPEPIRQLRDLTRARTAITRERGREVQRLEKLLEDAG
IKLSAVASDIMGVSGRAMLEALIAGDRDPAGLADLARRRLRSKIPELTEALAGRFTEHHAFLARVHLDLIDRHTAAVEQL
TERIEVVIEPFQGFHDLICTIPGISTITADIITAETGADMTRFPTAKHLASWAGTTPGSNESAGKVKSSRTRPGNPYLQG
ALGAAAMACSQNRTTYLGARYRRIASRRGPLKANVAIQHSMLIAIWHMGTTGTLYDDPGGEFFNRLHPDRTKMRAISQLE
AMGYRVTLDHAS

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45297; Mature: 45297

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVIHVRCAGMDVSKKDAKVCVRHAGAGRRKTVETVTTWTSMTGQILALREHLIAEQVTC
CCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
VVMEATGDYWKPFYYLLEDLPGVEVMLVNARHVKTLPGRKSDVADATWLAQLGAHGLVRA
EEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEE
SFVPPEPIRQLRDLTRARTAITRERGREVQRLEKLLEDAGIKLSAVASDIMGVSGRAMLE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHCCCHHHHHH
ALIAGDRDPAGLADLARRRLRSKIPELTEALAGRFTEHHAFLARVHLDLIDRHTAAVEQL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TERIEVVIEPFQGFHDLICTIPGISTITADIITAETGADMTRFPTAKHLASWAGTTPGSN
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEECCCCCCHHCCCHHHHHHHCCCCCCCC
ESAGKVKSSRTRPGNPYLQGALGAAAMACSQNRTTYLGARYRRIASRRGPLKANVAIQHS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEECEEEHHH
MLIAIWHMGTTGTLYDDPGGEFFNRLHPDRTKMRAISQLEAMGYRVTLDHAS
EEEEEEECCCCCCEEECCCHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCC
>Mature Secondary Structure
MEVIHVRCAGMDVSKKDAKVCVRHAGAGRRKTVETVTTWTSMTGQILALREHLIAEQVTC
CCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
VVMEATGDYWKPFYYLLEDLPGVEVMLVNARHVKTLPGRKSDVADATWLAQLGAHGLVRA
EEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEE
SFVPPEPIRQLRDLTRARTAITRERGREVQRLEKLLEDAGIKLSAVASDIMGVSGRAMLE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHCCCHHHHHH
ALIAGDRDPAGLADLARRRLRSKIPELTEALAGRFTEHHAFLARVHLDLIDRHTAAVEQL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TERIEVVIEPFQGFHDLICTIPGISTITADIITAETGADMTRFPTAKHLASWAGTTPGSN
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEECCCCCCHHCCCHHHHHHHCCCCCCCC
ESAGKVKSSRTRPGNPYLQGALGAAAMACSQNRTTYLGARYRRIASRRGPLKANVAIQHS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEECEEEHHH
MLIAIWHMGTTGTLYDDPGGEFFNRLHPDRTKMRAISQLEAMGYRVTLDHAS
EEEEEEECCCCCCEEECCCHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA