Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119716595
Identifier: 119716595
GI number: 119716595
Start: 2524645
End: 2525001
Strand: Reverse
Name: 119716595
Synonym: Noca_2368
Alternate gene names: NA
Gene position: 2525001-2524645 (Counterclockwise)
Preceding gene: 119716596
Following gene: 119716593
Centisome position: 50.64
GC content: 71.43
Gene sequence:
>357_bases GTGGACCTCCCGGCGACCTTCGGCTACGACCCCGCCGACCCGTGGGCGGTGTGGATCACCTTCCGCGGCCCGCGCGACGA GGTCCGCTGGGCGGTCGGGCGCGACCTGCTGCTGCAGGGCCTGACCGATCCGGCCGGCGAGGGCGACATCCAGCTGTGGC CGAGTATCGACGAGCATGGCCGCGCCGCGGTCGTAATGGAGCTCTGCTCCCCGGACGGCCGCCTGGTGACCCAGCTGCAC ACCCACGAGCTCTATCGTTTCCTGACCCGCACGCTCGCGATCGTGCCGGTCGGGTCGGAGGCGATCGACCTCGACGACCT CGTCGCCGAACTCACCGGGATCTCACGCGCGGAGTAG
Upstream 100 bases:
>100_bases CGGCCGGGTGCTCCGTCCCCCCACCGTGACGCAGCAGCCCCGGGCTCGAGCCATCGCCCAAGACCTGTCCCTCCAGTGCC TCGATGCCTCGGGGCATGCC
Downstream 100 bases:
>100_bases CAGCTCCGGCTCCCGACTCCGCCACACCTCGCGGACCGCGGTCGTGACCGGGCCGGGCGCGGGGACCTCGCGCTCGTCCC AGCGCGCGACGGCCTGCACG
Product: sporulation and cell division protein SsgA
Products: NA
Alternate protein names: Regulator; Regulatory Protein; Protein Regulatory Protein; SsgD Protein; SsgG Protein; SsgA Family Transcriptional Regulator; SsgA-Like Regulator
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MDLPATFGYDPADPWAVWITFRGPRDEVRWAVGRDLLLQGLTDPAGEGDIQLWPSIDEHGRAAVVMELCSPDGRLVTQLH THELYRFLTRTLAIVPVGSEAIDLDDLVAELTGISRAE
Sequences:
>Translated_118_residues MDLPATFGYDPADPWAVWITFRGPRDEVRWAVGRDLLLQGLTDPAGEGDIQLWPSIDEHGRAAVVMELCSPDGRLVTQLH THELYRFLTRTLAIVPVGSEAIDLDDLVAELTGISRAE >Mature_118_residues MDLPATFGYDPADPWAVWITFRGPRDEVRWAVGRDLLLQGLTDPAGEGDIQLWPSIDEHGRAAVVMELCSPDGRLVTQLH THELYRFLTRTLAIVPVGSEAIDLDDLVAELTGISRAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13067; Mature: 13067
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLPATFGYDPADPWAVWITFRGPRDEVRWAVGRDLLLQGLTDPAGEGDIQLWPSIDEHG CCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCC RAAVVMELCSPDGRLVTQLHTHELYRFLTRTLAIVPVGSEAIDLDDLVAELTGISRAE CEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCCCCC >Mature Secondary Structure MDLPATFGYDPADPWAVWITFRGPRDEVRWAVGRDLLLQGLTDPAGEGDIQLWPSIDEHG CCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCC RAAVVMELCSPDGRLVTQLHTHELYRFLTRTLAIVPVGSEAIDLDDLVAELTGISRAE CEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA