| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716563
Identifier: 119716563
GI number: 119716563
Start: 2492399
End: 2492833
Strand: Reverse
Name: 119716563
Synonym: Noca_2336
Alternate gene names: NA
Gene position: 2492833-2492399 (Counterclockwise)
Preceding gene: 119716575
Following gene: 119716562
Centisome position: 50.0
GC content: 76.55
Gene sequence:
>435_bases GTGCGGGCAGCTACCGCCCGCGGGCGGCTGCTCGTCGACGTCTTCGAGGGCTGGCTCGGGATCCTGGTGCTGGCCGTCCT GGCCTCCGGCACCGTGCTGCGAGCGCGGTGGCTGCCGCGGTTCGCACCGCTCAGCGGCGCGGTGGCGCTGCTGGCGCTGG CGGCACTGAACCCGGACGCCTGGATCGCCGAGCACAACCTGGACCGGTACGCCGAGACCGGGCGGGTGGACTGGACCTAC CTGCGCGGTCTCTCGGACGATGCCGTCCCCGCGCTGGCGCGGGTCGATCCCGCCGACCGGGTCTGCGCGCTGGCCGGCCG GGAGCCCGCCGACGACGACTGGCTGGAGTGGAACCTGGGACGCTCCCGGGCCACCGGCCTCCTCGACCCGGCCGCCGGGT CCGCGGACCCGGCGGGCCAGTGCCGGGACGACTGA
Upstream 100 bases:
>100_bases CCGCCCGGGCCGGACCACTGGACGGCCCGCCTGGCCAGCACCGAACCCGGCGACCACCTCCTGGTGGCCGAGCGGGCCGG CGCGCTGGTGGGCTACAGCT
Downstream 100 bases:
>100_bases CCTCGCGCCCGTCCTAGGCTGCGGCCATGACCCGCACCTCGGCCCGCTCCGGATCGCCCTTCGAGTCCTCCATCGGCTTC AGCCGCGCGGTCCGCGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MRAATARGRLLVDVFEGWLGILVLAVLASGTVLRARWLPRFAPLSGAVALLALAALNPDAWIAEHNLDRYAETGRVDWTY LRGLSDDAVPALARVDPADRVCALAGREPADDDWLEWNLGRSRATGLLDPAAGSADPAGQCRDD
Sequences:
>Translated_144_residues MRAATARGRLLVDVFEGWLGILVLAVLASGTVLRARWLPRFAPLSGAVALLALAALNPDAWIAEHNLDRYAETGRVDWTY LRGLSDDAVPALARVDPADRVCALAGREPADDDWLEWNLGRSRATGLLDPAAGSADPAGQCRDD >Mature_144_residues MRAATARGRLLVDVFEGWLGILVLAVLASGTVLRARWLPRFAPLSGAVALLALAALNPDAWIAEHNLDRYAETGRVDWTY LRGLSDDAVPALARVDPADRVCALAGREPADDDWLEWNLGRSRATGLLDPAAGSADPAGQCRDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15445; Mature: 15445
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAATARGRLLVDVFEGWLGILVLAVLASGTVLRARWLPRFAPLSGAVALLALAALNPDA CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEHHHCCCCCCHHHHHHHHHHHHCCCCC WIAEHNLDRYAETGRVDWTYLRGLSDDAVPALARVDPADRVCALAGREPADDDWLEWNLG HHHHCCHHHHHHCCCCCHHHHCCCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCEEECCC RSRATGLLDPAAGSADPAGQCRDD CCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRAATARGRLLVDVFEGWLGILVLAVLASGTVLRARWLPRFAPLSGAVALLALAALNPDA CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEHHHCCCCCCHHHHHHHHHHHHCCCCC WIAEHNLDRYAETGRVDWTYLRGLSDDAVPALARVDPADRVCALAGREPADDDWLEWNLG HHHHCCHHHHHHCCCCCHHHHCCCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCEEECCC RSRATGLLDPAAGSADPAGQCRDD CCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA