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The map label for this gene is cbiX [H]

Identifier: 119716575

GI number: 119716575

Start: 2501590

End: 2502333

Strand: Reverse

Name: cbiX [H]

Synonym: Noca_2348

Alternate gene names: 119716575

Gene position: 2502333-2501590 (Counterclockwise)

Preceding gene: 119716576

Following gene: 119716563

Centisome position: 50.19

GC content: 75.81

Gene sequence:

>744_bases
ATGGCTGCTCCTGCTCTGGTGGCCCTCGCTCACGGCAGTCGTGACCCGCGGTCTGCCGCCACGATCAAGGCCCTGGTCGA
CGAGGTCCGGGCGCTGCGCCCGGACCTGCGCATCGAGCCGGCGTTCCTCGAGCTCTCCCGACCGTCGTTCACGACCGTCG
TGGACCGCCTCGTGAAGGCGGGCTTCGACGAGATCGTGGTCGTCCCGCTGCTGCTCACGGAGGCGTTCCACGCCAAGGTC
GACGTGCCAAGCGCCGTCGCCGAGGCGGCCGAGCGGCACCCGGGCCTGCAGGTCCGCGCGACCTCGATCCTCGGGCTCGA
GGCGCGGTTCCTCGAGGTGCTGGACGTGCGCATGCGCGAGGCGCTGCGCGCGGCTCGGGCCCGCGAGCTCGACGCCCTGG
TGCTCGCCGCGGCCGGCTCGAGCGACCCGCTCGCCAACCAGTCCGTCGCCCGGCTCGCCCGTGTGTGGGGCTCGCGCCAC
AAGCTGCCCGTGACCGCCGCGTTCGCCTCGGCCTCCCCCCCGACCACCGGCGAGGCGGTGCGCGCTTTCCGCGGCGAGGG
GCGGCGCCACATCGCCGTGGCCTCGCTCTTCCTCGCCCCGGGCTTCCTGCCGGACCGCGCCGCCGAGCTGGCCCTGGAGG
CGGGCGCGATCGCGGTGTCCCAGCCGCTCGGCGCCCACCCGGAGCTGGCCCGCACCGTGCTGGCGCGGTACGCCGTCGGC
GCGGTCGAGCTGGTGCCCGTCTGA

Upstream 100 bases:

>100_bases
GGATCCCGCACCCCAGCCCGGCCGACAGCGTGGCCGACCGCGGCTTGCCCGAGATGCACTCCCCCGCACCAACCGCACGC
ACACGTAAGGAGGCGGCGTG

Downstream 100 bases:

>100_bases
GCTAGGAGACCAGCTGCTCGACCAGGCGCTCGAGCTGGCGTGCGGGGTCGCGGGTCAGCCCGCCGTGGACCGGGCCGGGC
TGGAGGACGGTGCTGCGCGG

Product: cobalamin (vitamin B12) biosynthesis CbiX protein

Products: NA

Alternate protein names: CbiXL [H]

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MAAPALVALAHGSRDPRSAATIKALVDEVRALRPDLRIEPAFLELSRPSFTTVVDRLVKAGFDEIVVVPLLLTEAFHAKV
DVPSAVAEAAERHPGLQVRATSILGLEARFLEVLDVRMREALRAARARELDALVLAAAGSSDPLANQSVARLARVWGSRH
KLPVTAAFASASPPTTGEAVRAFRGEGRRHIAVASLFLAPGFLPDRAAELALEAGAIAVSQPLGAHPELARTVLARYAVG
AVELVPV

Sequences:

>Translated_247_residues
MAAPALVALAHGSRDPRSAATIKALVDEVRALRPDLRIEPAFLELSRPSFTTVVDRLVKAGFDEIVVVPLLLTEAFHAKV
DVPSAVAEAAERHPGLQVRATSILGLEARFLEVLDVRMREALRAARARELDALVLAAAGSSDPLANQSVARLARVWGSRH
KLPVTAAFASASPPTTGEAVRAFRGEGRRHIAVASLFLAPGFLPDRAAELALEAGAIAVSQPLGAHPELARTVLARYAVG
AVELVPV
>Mature_246_residues
AAPALVALAHGSRDPRSAATIKALVDEVRALRPDLRIEPAFLELSRPSFTTVVDRLVKAGFDEIVVVPLLLTEAFHAKVD
VPSAVAEAAERHPGLQVRATSILGLEARFLEVLDVRMREALRAARARELDALVLAAAGSSDPLANQSVARLARVWGSRHK
LPVTAAFASASPPTTGEAVRAFRGEGRRHIAVASLFLAPGFLPDRAAELALEAGAIAVSQPLGAHPELARTVLARYAVGA
VELVPV

Specific function: Chelates cobalt to the cobalamin precursor as part of the anaerobic pathway to cobalamin biosynthesis [H]

COG id: COG2138

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiX family. CbiXL subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002762 [H]

Pfam domain/function: PF01903 CbiX [H]

EC number: =4.99.1.3 [H]

Molecular weight: Translated: 26091; Mature: 25960

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPALVALAHGSRDPRSAATIKALVDEVRALRPDLRIEPAFLELSRPSFTTVVDRLVKA
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHEECCCCHHHHHHHHHHHC
GFDEIVVVPLLLTEAFHAKVDVPSAVAEAAERHPGLQVRATSILGLEARFLEVLDVRMRE
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHH
ALRAARARELDALVLAAAGSSDPLANQSVARLARVWGSRHKLPVTAAFASASPPTTGEAV
HHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHH
RAFRGEGRRHIAVASLFLAPGFLPDRAAELALEAGAIAVSQPLGAHPELARTVLARYAVG
HHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHC
AVELVPV
CEEEECC
>Mature Secondary Structure 
AAPALVALAHGSRDPRSAATIKALVDEVRALRPDLRIEPAFLELSRPSFTTVVDRLVKA
CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHEECCCCHHHHHHHHHHHC
GFDEIVVVPLLLTEAFHAKVDVPSAVAEAAERHPGLQVRATSILGLEARFLEVLDVRMRE
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHH
ALRAARARELDALVLAAAGSSDPLANQSVARLARVWGSRHKLPVTAAFASASPPTTGEAV
HHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHH
RAFRGEGRRHIAVASLFLAPGFLPDRAAELALEAGAIAVSQPLGAHPELARTVLARYAVG
HHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHC
AVELVPV
CEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9742225; 12917443 [H]