| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716517
Identifier: 119716517
GI number: 119716517
Start: 2440583
End: 2441125
Strand: Reverse
Name: 119716517
Synonym: Noca_2290
Alternate gene names: NA
Gene position: 2441125-2440583 (Counterclockwise)
Preceding gene: 119716518
Following gene: 119716516
Centisome position: 48.96
GC content: 68.51
Gene sequence:
>543_bases TTGTCCTCGATGGCTGCTCAGTCTCTCGCCTCGCAGGCATGGAGGGACCTTGCGGTTATCCACAGCCGGCCGCCGGCGGC CACCCGTCCGCCGGCGAGATCCGCGAGACTCGAGTCAGCGACACCTCTCGGCAGGAAGGACAACTCGGTGGACGACAACG ACCAGCTCGAAGCAGGCGGACACGCGACGGCCGCCCGCGAGCACGTCTACGGCTTCAACCGCGCCACGATGTGGGAGCGC GACCAGATCCCGGCCAAGACCTCGGACCAGCTGGCGGAGTTCGCCGACCTCGCGGCCGCTCTCCCCCAGGCCTTCTCGCA GCTCTCCAGCACGCTTGAGCGGGCCCTGGCTCACCAGGTGCTCAGCATGGATGCGATGACCGACGAGTCGGACCCGGCGA TGGCAGTCGACGTCGCCCGCCTCCACCTCGAGGAGGCCCGCGGTCTCGCGGTCAACCTCCACAAGCAACTCAACGCCGCG CGGAACGCGACCGCGCACATCATCAGCCAGGACGTCGACGGCGGGCAGGAGTCAATGTCCTAG
Upstream 100 bases:
>100_bases CGCTGACCGCCGCGGCGAGCCGGCGATAGGCCTCGACATCCTGGGGGCGTTGAACCACGCAGGGCGGACATCGCGAACGC GCCGCGCGATCAGGGCCCCT
Downstream 100 bases:
>100_bases GACCAGCCCTGACCCGGCCCCACTCGAACATCGCGAGATTTCTTTCGCGTCGGGTGATCGCCCCGGCGGGTCGACCTTCC TTTGGTGACCGAGAGATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSSMAAQSLASQAWRDLAVIHSRPPAATRPPARSARLESATPLGRKDNSVDDNDQLEAGGHATAAREHVYGFNRATMWER DQIPAKTSDQLAEFADLAAALPQAFSQLSSTLERALAHQVLSMDAMTDESDPAMAVDVARLHLEEARGLAVNLHKQLNAA RNATAHIISQDVDGGQESMS
Sequences:
>Translated_180_residues MSSMAAQSLASQAWRDLAVIHSRPPAATRPPARSARLESATPLGRKDNSVDDNDQLEAGGHATAAREHVYGFNRATMWER DQIPAKTSDQLAEFADLAAALPQAFSQLSSTLERALAHQVLSMDAMTDESDPAMAVDVARLHLEEARGLAVNLHKQLNAA RNATAHIISQDVDGGQESMS >Mature_179_residues SSMAAQSLASQAWRDLAVIHSRPPAATRPPARSARLESATPLGRKDNSVDDNDQLEAGGHATAAREHVYGFNRATMWERD QIPAKTSDQLAEFADLAAALPQAFSQLSSTLERALAHQVLSMDAMTDESDPAMAVDVARLHLEEARGLAVNLHKQLNAAR NATAHIISQDVDGGQESMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19337; Mature: 19205
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSMAAQSLASQAWRDLAVIHSRPPAATRPPARSARLESATPLGRKDNSVDDNDQLEAGG CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC HATAAREHVYGFNRATMWERDQIPAKTSDQLAEFADLAAALPQAFSQLSSTLERALAHQV CHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSMDAMTDESDPAMAVDVARLHLEEARGLAVNLHKQLNAARNATAHIISQDVDGGQESMS HHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHCCC >Mature Secondary Structure SSMAAQSLASQAWRDLAVIHSRPPAATRPPARSARLESATPLGRKDNSVDDNDQLEAGG CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC HATAAREHVYGFNRATMWERDQIPAKTSDQLAEFADLAAALPQAFSQLSSTLERALAHQV CHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSMDAMTDESDPAMAVDVARLHLEEARGLAVNLHKQLNAARNATAHIISQDVDGGQESMS HHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA