Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716518

Identifier: 119716518

GI number: 119716518

Start: 2441485

End: 2442834

Strand: Reverse

Name: 119716518

Synonym: Noca_2291

Alternate gene names: NA

Gene position: 2442834-2441485 (Counterclockwise)

Preceding gene: 119716519

Following gene: 119716517

Centisome position: 49.0

GC content: 69.41

Gene sequence:

>1350_bases
GTGGCGCTGGTGGATCAGAGCCCGTACACGCCCGGCGCTGGCCACAACCCGCCCGTCCTGGCAGGACGCGACGGCCTTCT
CCGTGACTGGCACTTGGTGCTCAACGACATTGTCTCTGGCGGCCGCGTCCGCGCCCAGGACATGATCCTTGCCGGCCCGC
GCGGCGTGGGGAAGACCGTCACGGTGAGCGCATTCGCGGACCTCGCTCAGGAGCAAGGCTTCGAGGTGGTCAACCTCCAG
GCTGTCTCGGGCCACGCTGGTCTGGTAGAAGCGCTGCTCCAGCGCGCTCGCACCCGTATGGCCGAGGAGGCCGGCCCGTG
GCAGCGCGCCCGCAAAACCTTCGAGCGGATCGGTGGGGTCAACCTCAGCATCGCGGGCATCGGTGCCGGGATCTCCACTC
GCCAATCCAACGCCGCAGCACCAGGCTTGGACGCGGGAACGCTCGCTGACGCCCTGGCCACGCTGGCTACCGAAGTACGG
AAGGACGCCCACAGCGGGGGCCTGCTGATCACCGTCGATGAGCTCCAGGTCGCCTCTGGTCCTGACCTCGCCCTGCTCGC
GGCGACACTGCACCGACTCAACGTCGACCACCCCTCCTCGCCGGTCCTCTTCGCCGGCACCGGGCTGCCCTTCACTCCCG
ATGCGCTCCGCAAGGCCGGCGTGACCCACCCAGATCGCCTCTTCGTGCTGGAGCCCATCCCCCTCACTCTCGAACCCGAT
GACGCCCGCTACGCCGTGGTGGAGCCGGCACGCCGGGCCGGCGTCGCGTGGACCCCCGAGGCGGCGGCAGCCGTGGTCGA
GGCGAGCAACGGCTACCCGGCCCACGTGCAGCTGTTCGCCCACGCCATTTGGACATCCGCGCCCGGGCCCGACCAGATCA
CCCTCGGCGACGTCGAAGCCGCACTCCCCCAGGTCGCCGACATGCTCGAGCGCCGCACCCTTGGCCCCCGATGGGACCGA
ATCAGCGATCGACAGATGGAGTTCCTTGCCGCACTCGCTCTGCACGGCGGGCGCGCCTCGACAGCGGCGATCGCCAAGAC
TCTCGGTCGCTCCCAGCAAGAGCTGTCCTGGCTCCGTGAGGAGCTCATCGAGGAGGGCGACGTCTACGCACCCAAGCGCG
GCCAGCTGGCGATGGCGGTCCCGCTCTTCAACCGCTTCGTTCTGAGCCACTACGAACGCACGCGACCCGAAGCAGCGACC
GAACTGCTGAGCTTGCAGAAGATGATCGCGAACGCCGGGCTGGATCCCTCAGCAACGCACGCGGGTCGGGACATGCTTCG
CCGGAGCGAGCAGAACGAACCCCGCCAGTTGCCACCGCCCAGCGGCGGATCTGGGCGGCCGCGTTCCTGA

Upstream 100 bases:

>100_bases
GACACGCCGGTCACATGCGCGAGAGCTCGTCCGGCCTAGTGAGCCGACTGCCACCTAGACTGACCTAGAAACTCCTCGAA
ATCTAGGTGAGTCTAGGAAG

Downstream 100 bases:

>100_bases
GTGGCGGCGCGCACCGCGACCAGACCGGTGGTGGCATAATTCGGTTACTTAACGCAGCTGTGTAACGGGCTCGGAGCGGG
CCGACACGGACCGCGATAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; AAA ATPase

Number of amino acids: Translated: 449; Mature: 448

Protein sequence:

>449_residues
MALVDQSPYTPGAGHNPPVLAGRDGLLRDWHLVLNDIVSGGRVRAQDMILAGPRGVGKTVTVSAFADLAQEQGFEVVNLQ
AVSGHAGLVEALLQRARTRMAEEAGPWQRARKTFERIGGVNLSIAGIGAGISTRQSNAAAPGLDAGTLADALATLATEVR
KDAHSGGLLITVDELQVASGPDLALLAATLHRLNVDHPSSPVLFAGTGLPFTPDALRKAGVTHPDRLFVLEPIPLTLEPD
DARYAVVEPARRAGVAWTPEAAAAVVEASNGYPAHVQLFAHAIWTSAPGPDQITLGDVEAALPQVADMLERRTLGPRWDR
ISDRQMEFLAALALHGGRASTAAIAKTLGRSQQELSWLREELIEEGDVYAPKRGQLAMAVPLFNRFVLSHYERTRPEAAT
ELLSLQKMIANAGLDPSATHAGRDMLRRSEQNEPRQLPPPSGGSGRPRS

Sequences:

>Translated_449_residues
MALVDQSPYTPGAGHNPPVLAGRDGLLRDWHLVLNDIVSGGRVRAQDMILAGPRGVGKTVTVSAFADLAQEQGFEVVNLQ
AVSGHAGLVEALLQRARTRMAEEAGPWQRARKTFERIGGVNLSIAGIGAGISTRQSNAAAPGLDAGTLADALATLATEVR
KDAHSGGLLITVDELQVASGPDLALLAATLHRLNVDHPSSPVLFAGTGLPFTPDALRKAGVTHPDRLFVLEPIPLTLEPD
DARYAVVEPARRAGVAWTPEAAAAVVEASNGYPAHVQLFAHAIWTSAPGPDQITLGDVEAALPQVADMLERRTLGPRWDR
ISDRQMEFLAALALHGGRASTAAIAKTLGRSQQELSWLREELIEEGDVYAPKRGQLAMAVPLFNRFVLSHYERTRPEAAT
ELLSLQKMIANAGLDPSATHAGRDMLRRSEQNEPRQLPPPSGGSGRPRS
>Mature_448_residues
ALVDQSPYTPGAGHNPPVLAGRDGLLRDWHLVLNDIVSGGRVRAQDMILAGPRGVGKTVTVSAFADLAQEQGFEVVNLQA
VSGHAGLVEALLQRARTRMAEEAGPWQRARKTFERIGGVNLSIAGIGAGISTRQSNAAAPGLDAGTLADALATLATEVRK
DAHSGGLLITVDELQVASGPDLALLAATLHRLNVDHPSSPVLFAGTGLPFTPDALRKAGVTHPDRLFVLEPIPLTLEPDD
ARYAVVEPARRAGVAWTPEAAAAVVEASNGYPAHVQLFAHAIWTSAPGPDQITLGDVEAALPQVADMLERRTLGPRWDRI
SDRQMEFLAALALHGGRASTAAIAKTLGRSQQELSWLREELIEEGDVYAPKRGQLAMAVPLFNRFVLSHYERTRPEAATE
LLSLQKMIANAGLDPSATHAGRDMLRRSEQNEPRQLPPPSGGSGRPRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47799; Mature: 47668

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALVDQSPYTPGAGHNPPVLAGRDGLLRDWHLVLNDIVSGGRVRAQDMILAGPRGVGKTV
CCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCEEECCEEEECCCCCCCEE
TVSAFADLAQEQGFEVVNLQAVSGHAGLVEALLQRARTRMAEEAGPWQRARKTFERIGGV
EHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
NLSIAGIGAGISTRQSNAAAPGLDAGTLADALATLATEVRKDAHSGGLLITVDELQVASG
EEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEECCC
PDLALLAATLHRLNVDHPSSPVLFAGTGLPFTPDALRKAGVTHPDRLFVLEPIPLTLEPD
CCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCEEEECCCCEEECCC
DARYAVVEPARRAGVAWTPEAAAAVVEASNGYPAHVQLFAHAIWTSAPGPDQITLGDVEA
CCCEEEECCHHHCCCCCCCHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCEEECHHHH
ALPQVADMLERRTLGPRWDRISDRQMEFLAALALHGGRASTAAIAKTLGRSQQELSWLRE
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH
ELIEEGDVYAPKRGQLAMAVPLFNRFVLSHYERTRPEAATELLSLQKMIANAGLDPSATH
HHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHH
AGRDMLRRSEQNEPRQLPPPSGGSGRPRS
HHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALVDQSPYTPGAGHNPPVLAGRDGLLRDWHLVLNDIVSGGRVRAQDMILAGPRGVGKTV
CCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCEEECCEEEECCCCCCCEE
TVSAFADLAQEQGFEVVNLQAVSGHAGLVEALLQRARTRMAEEAGPWQRARKTFERIGGV
EHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
NLSIAGIGAGISTRQSNAAAPGLDAGTLADALATLATEVRKDAHSGGLLITVDELQVASG
EEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEECCC
PDLALLAATLHRLNVDHPSSPVLFAGTGLPFTPDALRKAGVTHPDRLFVLEPIPLTLEPD
CCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCEEEECCCCEEECCC
DARYAVVEPARRAGVAWTPEAAAAVVEASNGYPAHVQLFAHAIWTSAPGPDQITLGDVEA
CCCEEEECCHHHCCCCCCCHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCEEECHHHH
ALPQVADMLERRTLGPRWDRISDRQMEFLAALALHGGRASTAAIAKTLGRSQQELSWLRE
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH
ELIEEGDVYAPKRGQLAMAVPLFNRFVLSHYERTRPEAATELLSLQKMIANAGLDPSATH
HHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHH
AGRDMLRRSEQNEPRQLPPPSGGSGRPRS
HHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA