| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716518
Identifier: 119716518
GI number: 119716518
Start: 2441485
End: 2442834
Strand: Reverse
Name: 119716518
Synonym: Noca_2291
Alternate gene names: NA
Gene position: 2442834-2441485 (Counterclockwise)
Preceding gene: 119716519
Following gene: 119716517
Centisome position: 49.0
GC content: 69.41
Gene sequence:
>1350_bases GTGGCGCTGGTGGATCAGAGCCCGTACACGCCCGGCGCTGGCCACAACCCGCCCGTCCTGGCAGGACGCGACGGCCTTCT CCGTGACTGGCACTTGGTGCTCAACGACATTGTCTCTGGCGGCCGCGTCCGCGCCCAGGACATGATCCTTGCCGGCCCGC GCGGCGTGGGGAAGACCGTCACGGTGAGCGCATTCGCGGACCTCGCTCAGGAGCAAGGCTTCGAGGTGGTCAACCTCCAG GCTGTCTCGGGCCACGCTGGTCTGGTAGAAGCGCTGCTCCAGCGCGCTCGCACCCGTATGGCCGAGGAGGCCGGCCCGTG GCAGCGCGCCCGCAAAACCTTCGAGCGGATCGGTGGGGTCAACCTCAGCATCGCGGGCATCGGTGCCGGGATCTCCACTC GCCAATCCAACGCCGCAGCACCAGGCTTGGACGCGGGAACGCTCGCTGACGCCCTGGCCACGCTGGCTACCGAAGTACGG AAGGACGCCCACAGCGGGGGCCTGCTGATCACCGTCGATGAGCTCCAGGTCGCCTCTGGTCCTGACCTCGCCCTGCTCGC GGCGACACTGCACCGACTCAACGTCGACCACCCCTCCTCGCCGGTCCTCTTCGCCGGCACCGGGCTGCCCTTCACTCCCG ATGCGCTCCGCAAGGCCGGCGTGACCCACCCAGATCGCCTCTTCGTGCTGGAGCCCATCCCCCTCACTCTCGAACCCGAT GACGCCCGCTACGCCGTGGTGGAGCCGGCACGCCGGGCCGGCGTCGCGTGGACCCCCGAGGCGGCGGCAGCCGTGGTCGA GGCGAGCAACGGCTACCCGGCCCACGTGCAGCTGTTCGCCCACGCCATTTGGACATCCGCGCCCGGGCCCGACCAGATCA CCCTCGGCGACGTCGAAGCCGCACTCCCCCAGGTCGCCGACATGCTCGAGCGCCGCACCCTTGGCCCCCGATGGGACCGA ATCAGCGATCGACAGATGGAGTTCCTTGCCGCACTCGCTCTGCACGGCGGGCGCGCCTCGACAGCGGCGATCGCCAAGAC TCTCGGTCGCTCCCAGCAAGAGCTGTCCTGGCTCCGTGAGGAGCTCATCGAGGAGGGCGACGTCTACGCACCCAAGCGCG GCCAGCTGGCGATGGCGGTCCCGCTCTTCAACCGCTTCGTTCTGAGCCACTACGAACGCACGCGACCCGAAGCAGCGACC GAACTGCTGAGCTTGCAGAAGATGATCGCGAACGCCGGGCTGGATCCCTCAGCAACGCACGCGGGTCGGGACATGCTTCG CCGGAGCGAGCAGAACGAACCCCGCCAGTTGCCACCGCCCAGCGGCGGATCTGGGCGGCCGCGTTCCTGA
Upstream 100 bases:
>100_bases GACACGCCGGTCACATGCGCGAGAGCTCGTCCGGCCTAGTGAGCCGACTGCCACCTAGACTGACCTAGAAACTCCTCGAA ATCTAGGTGAGTCTAGGAAG
Downstream 100 bases:
>100_bases GTGGCGGCGCGCACCGCGACCAGACCGGTGGTGGCATAATTCGGTTACTTAACGCAGCTGTGTAACGGGCTCGGAGCGGG CCGACACGGACCGCGATAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; AAA ATPase
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MALVDQSPYTPGAGHNPPVLAGRDGLLRDWHLVLNDIVSGGRVRAQDMILAGPRGVGKTVTVSAFADLAQEQGFEVVNLQ AVSGHAGLVEALLQRARTRMAEEAGPWQRARKTFERIGGVNLSIAGIGAGISTRQSNAAAPGLDAGTLADALATLATEVR KDAHSGGLLITVDELQVASGPDLALLAATLHRLNVDHPSSPVLFAGTGLPFTPDALRKAGVTHPDRLFVLEPIPLTLEPD DARYAVVEPARRAGVAWTPEAAAAVVEASNGYPAHVQLFAHAIWTSAPGPDQITLGDVEAALPQVADMLERRTLGPRWDR ISDRQMEFLAALALHGGRASTAAIAKTLGRSQQELSWLREELIEEGDVYAPKRGQLAMAVPLFNRFVLSHYERTRPEAAT ELLSLQKMIANAGLDPSATHAGRDMLRRSEQNEPRQLPPPSGGSGRPRS
Sequences:
>Translated_449_residues MALVDQSPYTPGAGHNPPVLAGRDGLLRDWHLVLNDIVSGGRVRAQDMILAGPRGVGKTVTVSAFADLAQEQGFEVVNLQ AVSGHAGLVEALLQRARTRMAEEAGPWQRARKTFERIGGVNLSIAGIGAGISTRQSNAAAPGLDAGTLADALATLATEVR KDAHSGGLLITVDELQVASGPDLALLAATLHRLNVDHPSSPVLFAGTGLPFTPDALRKAGVTHPDRLFVLEPIPLTLEPD DARYAVVEPARRAGVAWTPEAAAAVVEASNGYPAHVQLFAHAIWTSAPGPDQITLGDVEAALPQVADMLERRTLGPRWDR ISDRQMEFLAALALHGGRASTAAIAKTLGRSQQELSWLREELIEEGDVYAPKRGQLAMAVPLFNRFVLSHYERTRPEAAT ELLSLQKMIANAGLDPSATHAGRDMLRRSEQNEPRQLPPPSGGSGRPRS >Mature_448_residues ALVDQSPYTPGAGHNPPVLAGRDGLLRDWHLVLNDIVSGGRVRAQDMILAGPRGVGKTVTVSAFADLAQEQGFEVVNLQA VSGHAGLVEALLQRARTRMAEEAGPWQRARKTFERIGGVNLSIAGIGAGISTRQSNAAAPGLDAGTLADALATLATEVRK DAHSGGLLITVDELQVASGPDLALLAATLHRLNVDHPSSPVLFAGTGLPFTPDALRKAGVTHPDRLFVLEPIPLTLEPDD ARYAVVEPARRAGVAWTPEAAAAVVEASNGYPAHVQLFAHAIWTSAPGPDQITLGDVEAALPQVADMLERRTLGPRWDRI SDRQMEFLAALALHGGRASTAAIAKTLGRSQQELSWLREELIEEGDVYAPKRGQLAMAVPLFNRFVLSHYERTRPEAATE LLSLQKMIANAGLDPSATHAGRDMLRRSEQNEPRQLPPPSGGSGRPRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47799; Mature: 47668
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALVDQSPYTPGAGHNPPVLAGRDGLLRDWHLVLNDIVSGGRVRAQDMILAGPRGVGKTV CCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCEEECCEEEECCCCCCCEE TVSAFADLAQEQGFEVVNLQAVSGHAGLVEALLQRARTRMAEEAGPWQRARKTFERIGGV EHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC NLSIAGIGAGISTRQSNAAAPGLDAGTLADALATLATEVRKDAHSGGLLITVDELQVASG EEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEECCC PDLALLAATLHRLNVDHPSSPVLFAGTGLPFTPDALRKAGVTHPDRLFVLEPIPLTLEPD CCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCEEEECCCCEEECCC DARYAVVEPARRAGVAWTPEAAAAVVEASNGYPAHVQLFAHAIWTSAPGPDQITLGDVEA CCCEEEECCHHHCCCCCCCHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCEEECHHHH ALPQVADMLERRTLGPRWDRISDRQMEFLAALALHGGRASTAAIAKTLGRSQQELSWLRE HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH ELIEEGDVYAPKRGQLAMAVPLFNRFVLSHYERTRPEAATELLSLQKMIANAGLDPSATH HHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHH AGRDMLRRSEQNEPRQLPPPSGGSGRPRS HHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ALVDQSPYTPGAGHNPPVLAGRDGLLRDWHLVLNDIVSGGRVRAQDMILAGPRGVGKTV CCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCEEECCEEEECCCCCCCEE TVSAFADLAQEQGFEVVNLQAVSGHAGLVEALLQRARTRMAEEAGPWQRARKTFERIGGV EHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC NLSIAGIGAGISTRQSNAAAPGLDAGTLADALATLATEVRKDAHSGGLLITVDELQVASG EEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEECCC PDLALLAATLHRLNVDHPSSPVLFAGTGLPFTPDALRKAGVTHPDRLFVLEPIPLTLEPD CCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCEEEECCCCEEECCC DARYAVVEPARRAGVAWTPEAAAAVVEASNGYPAHVQLFAHAIWTSAPGPDQITLGDVEA CCCEEEECCHHHCCCCCCCHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCEEECHHHH ALPQVADMLERRTLGPRWDRISDRQMEFLAALALHGGRASTAAIAKTLGRSQQELSWLRE HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH ELIEEGDVYAPKRGQLAMAVPLFNRFVLSHYERTRPEAATELLSLQKMIANAGLDPSATH HHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHH AGRDMLRRSEQNEPRQLPPPSGGSGRPRS HHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA