| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716516
Identifier: 119716516
GI number: 119716516
Start: 2439582
End: 2440298
Strand: Reverse
Name: 119716516
Synonym: Noca_2289
Alternate gene names: NA
Gene position: 2440298-2439582 (Counterclockwise)
Preceding gene: 119716517
Following gene: 119716514
Centisome position: 48.94
GC content: 70.99
Gene sequence:
>717_bases ATGACCACCGACACCACGCTGAGCGCCGCCGACGCTGTGTTCGAGGCCGAGCAGGCCGTGAGCAGAGCGCGCTGGGTCGT GGAGGAGCTCCAGGAGACGATCGCCTCCGCACTCCGCGTGCTCGACGACGCCGAACTCGACTCGGCCAAGGCCAAGCTGT CCGAGCGCGGCTCCTTCTACCTCGAGGCCGCCGGCGAGCACCTGGGCCGGCTGCACACGCGGTGCAACGACATGCCGGAG CTCACCCACGACCTATTCGCGCACCTCAACCGCGCATCGCAGTCCGTCACCGACGCCCGCACCCTCCTCGACCTGGCCGA CACCTCCGATCCCGTCATCGCCAGCGAGATCGCTCAGCTCAAGCCGCGCATCGCGGTCGTCGGCGAGATGGTCGCCCTCG CAAAGCCGGTCGCCCAGCTGGCTGCCCAGCACGCCGAGACCGCGCACCAGGCCAGCCGGGACGTCACTGCCCTGGGCCTG CTGGAGCCGGTCAACCTAGAGCGAAGCATCGCAACCGCCGGCAAGGAGCTCGGCCGCGCCGACGAGGACGTGCGCCTGCT CGGCAACATCGTCGACCACGCTGCGGCTAACGCCCGTCAGTCGGCCGGGATCGCCAGCGAGATCACCGACAACGCCCGCC GGCGGATGTCCGAGCAGAGCCGGGACCCGATCCCGAGCGCATCGTCGCGCCCGACGCCCCGGTCCCCGAGTCGGTAG
Upstream 100 bases:
>100_bases GCACCCACCTCGAGCAGGCCCTGGCTGCGCTCGATCGACTCCGCGAGGTACTGCCGCCGCCCACCGCTCCCCCGCCCGAA ACCAGTGACGGTGAGTCGGC
Downstream 100 bases:
>100_bases AGGGAGCCATGGACCTCGACCAGGGCAGGTCATGGACGAGCAGCTGACGATGGCCGCGAAGACGCTGGCCGGTGGTGCTA CGCCCGTGGCCTCGACGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MTTDTTLSAADAVFEAEQAVSRARWVVEELQETIASALRVLDDAELDSAKAKLSERGSFYLEAAGEHLGRLHTRCNDMPE LTHDLFAHLNRASQSVTDARTLLDLADTSDPVIASEIAQLKPRIAVVGEMVALAKPVAQLAAQHAETAHQASRDVTALGL LEPVNLERSIATAGKELGRADEDVRLLGNIVDHAAANARQSAGIASEITDNARRRMSEQSRDPIPSASSRPTPRSPSR
Sequences:
>Translated_238_residues MTTDTTLSAADAVFEAEQAVSRARWVVEELQETIASALRVLDDAELDSAKAKLSERGSFYLEAAGEHLGRLHTRCNDMPE LTHDLFAHLNRASQSVTDARTLLDLADTSDPVIASEIAQLKPRIAVVGEMVALAKPVAQLAAQHAETAHQASRDVTALGL LEPVNLERSIATAGKELGRADEDVRLLGNIVDHAAANARQSAGIASEITDNARRRMSEQSRDPIPSASSRPTPRSPSR >Mature_237_residues TTDTTLSAADAVFEAEQAVSRARWVVEELQETIASALRVLDDAELDSAKAKLSERGSFYLEAAGEHLGRLHTRCNDMPEL THDLFAHLNRASQSVTDARTLLDLADTSDPVIASEIAQLKPRIAVVGEMVALAKPVAQLAAQHAETAHQASRDVTALGLL EPVNLERSIATAGKELGRADEDVRLLGNIVDHAAANARQSAGIASEITDNARRRMSEQSRDPIPSASSRPTPRSPSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25573; Mature: 25442
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDTTLSAADAVFEAEQAVSRARWVVEELQETIASALRVLDDAELDSAKAKLSERGSFY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LEAAGEHLGRLHTRCNDMPELTHDLFAHLNRASQSVTDARTLLDLADTSDPVIASEIAQL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH KPRIAVVGEMVALAKPVAQLAAQHAETAHQASRDVTALGLLEPVNLERSIATAGKELGRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHCCC DEDVRLLGNIVDHAAANARQSAGIASEITDNARRRMSEQSRDPIPSASSRPTPRSPSR CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTDTTLSAADAVFEAEQAVSRARWVVEELQETIASALRVLDDAELDSAKAKLSERGSFY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LEAAGEHLGRLHTRCNDMPELTHDLFAHLNRASQSVTDARTLLDLADTSDPVIASEIAQL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH KPRIAVVGEMVALAKPVAQLAAQHAETAHQASRDVTALGLLEPVNLERSIATAGKELGRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHCCC DEDVRLLGNIVDHAAANARQSAGIASEITDNARRRMSEQSRDPIPSASSRPTPRSPSR CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA