Click here to switch to the map view.

The map label for this gene is speE2 [H]

Identifier: 119715300

GI number: 119715300

Start: 1119060

End: 1119743

Strand: Reverse

Name: speE2 [H]

Synonym: Noca_1060

Alternate gene names: 119715300

Gene position: 1119743-1119060 (Counterclockwise)

Preceding gene: 119715301

Following gene: 119715299

Centisome position: 22.46

GC content: 73.54

Gene sequence:

>684_bases
GTGGAGTACGTCGAGATCGCGCGCGCGGAGACCGCGCGCGGCGAGCTGGTCCTGCGCGAGCGCCGCGCGGACAACGCGCC
GACCTCCCTGGAGCTGCGCGCCAACGGCGTGTTCGTCATGGACACCCTCGAGGTCGGCTCCGAGCAGGCGCTCGCGGAGG
CCGCGCTCGCCCAGGTCCAGCAGCCGCGGGCGGTCGTGGTCGCCGGCCTCGGCCTCGGGTTCACCATGCACGCGGTGCTC
GCCGATCAACGGGTGGAGAAGGTCGCCGTCGTCGAGATCGAGCAGGCGCTGGTCGACTGGATGCGGGCCGGCACGATCCC
GCACGGCCCGGGGCTGCTCGCGGACGAGCGGGTCACGGTGGTCGTCGCCGACATCGGCGAGGCGATGGCCGAGGCCCGGC
CGGCGTCGTACGACCTGATCCTCCTCGACGTCGACAACGGGCCGGGCTACCTGGTGCACGACGTCAACGCGGCGCTCTAC
GAGCAGCCGTTCCTCGAGGCCGCCGCCCGCGCGCTGCGGCCCGGCGGCGCCCTGGCGATCTGGTCGGCGGCCGAGGCTCC
GGTCCTCGGCCGGACGATGGACTCGGTGTTCGGCAACGTCGAGGCGACGCCGTACGAGGTGCTGCTGCAGGACCGCGACG
AGCAGTACTGGCTCTACGCGGCGCGGGTAACGTCCGACGCATGA

Upstream 100 bases:

>100_bases
ACGCGCCCCCATCGCGACGTCGTACGAAACGGTCGCTCAGCGAGCTGTTCGACTGACACCGACGGTCCACCGTCGGGTCG
CGTCCGCAAGACTGGGCGCC

Downstream 100 bases:

>100_bases
CCCTTGACGACACCGCGGACTTCCGCGTCGAGCACGACAGCATGGGCGAGGTCCGCGTCCCCGCGGACGCGCTCTGGCGG
GCCCAGACCCAGCGAGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: Putrescine aminopropyltransferase 2; PAPT 2; SPDSY 2 [H]

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MEYVEIARAETARGELVLRERRADNAPTSLELRANGVFVMDTLEVGSEQALAEAALAQVQQPRAVVVAGLGLGFTMHAVL
ADQRVEKVAVVEIEQALVDWMRAGTIPHGPGLLADERVTVVVADIGEAMAEARPASYDLILLDVDNGPGYLVHDVNAALY
EQPFLEAAARALRPGGALAIWSAAEAPVLGRTMDSVFGNVEATPYEVLLQDRDEQYWLYAARVTSDA

Sequences:

>Translated_227_residues
MEYVEIARAETARGELVLRERRADNAPTSLELRANGVFVMDTLEVGSEQALAEAALAQVQQPRAVVVAGLGLGFTMHAVL
ADQRVEKVAVVEIEQALVDWMRAGTIPHGPGLLADERVTVVVADIGEAMAEARPASYDLILLDVDNGPGYLVHDVNAALY
EQPFLEAAARALRPGGALAIWSAAEAPVLGRTMDSVFGNVEATPYEVLLQDRDEQYWLYAARVTSDA
>Mature_227_residues
MEYVEIARAETARGELVLRERRADNAPTSLELRANGVFVMDTLEVGSEQALAEAALAQVQQPRAVVVAGLGLGFTMHAVL
ADQRVEKVAVVEIEQALVDWMRAGTIPHGPGLLADERVTVVVADIGEAMAEARPASYDLILLDVDNGPGYLVHDVNAALY
EQPFLEAAARALRPGGALAIWSAAEAPVLGRTMDSVFGNVEATPYEVLLQDRDEQYWLYAARVTSDA

Specific function: Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor [H]

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spermidine/spermine synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001045 [H]

Pfam domain/function: PF01564 Spermine_synth [H]

EC number: =2.5.1.16 [H]

Molecular weight: Translated: 24453; Mature: 24453

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: PS51006 SPERMIDINE_SYNTHASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYVEIARAETARGELVLRERRADNAPTSLELRANGVFVMDTLEVGSEQALAEAALAQVQ
CCHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHHC
QPRAVVVAGLGLGFTMHAVLADQRVEKVAVVEIEQALVDWMRAGTIPHGPGLLADERVTV
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
VVADIGEAMAEARPASYDLILLDVDNGPGYLVHDVNAALYEQPFLEAAARALRPGGALAI
EEEHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEE
WSAAEAPVLGRTMDSVFGNVEATPYEVLLQDRDEQYWLYAARVTSDA
ECCCCCCHHHHHHHHHHCCCCCCHHEEEEECCCCEEEEEEEEEECCC
>Mature Secondary Structure
MEYVEIARAETARGELVLRERRADNAPTSLELRANGVFVMDTLEVGSEQALAEAALAQVQ
CCHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHHC
QPRAVVVAGLGLGFTMHAVLADQRVEKVAVVEIEQALVDWMRAGTIPHGPGLLADERVTV
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
VVADIGEAMAEARPASYDLILLDVDNGPGYLVHDVNAALYEQPFLEAAARALRPGGALAI
EEEHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEE
WSAAEAPVLGRTMDSVFGNVEATPYEVLLQDRDEQYWLYAARVTSDA
ECCCCCCHHHHHHHHHHCCCCCCHHEEEEECCCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]