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The map label for this gene is pcaC [H]

Identifier: 119715252

GI number: 119715252

Start: 1063015

End: 1064223

Strand: Direct

Name: pcaC [H]

Synonym: Noca_1011

Alternate gene names: 119715252

Gene position: 1063015-1064223 (Clockwise)

Preceding gene: 119715249

Following gene: 119715254

Centisome position: 21.32

GC content: 74.86

Gene sequence:

>1209_bases
ATGAACCCCACCGTCACCGCGGTCCGGATGACCCTGACCCAGCACCGTTCGGACCTGCCGCTGCTCGTGCTCGGCCCGTC
GCTCGGCACCACGGCCACCACGCTGTGGAGCGCCTGTGCGGGCCACCTCGCCGACGCCTTCGACATCCTCGCCTGGGACC
TGCCGGGCCACGGCCACAACCGGGCCGCCGCAGAGGCGTTCACGATGGCCGGGCTCGCCGCAGGCGTGCTGCACGTCGTC
GACGAGGTGCTCGCCGAGCGAGGCGAGCCGGGCGGTTCGTTCCACTACGCCGGCGACTCGGTCGGCGGCGCCGTCGGGCT
GCAGCTGCTCCTCGACGCCCCGGAGCGGGTCACCGCGGCGGTGCTGCTGTGCACCGGCCCGCAGATCGGCACCGCCGAGT
CGTGGACCGAGCGGATCGAGAAGGTGCGGTCCTCGGGCACCTCGAGCCTGGTGTCGGCCTCCGCCGAGCGCTGGTTCGCG
CCGGGGTTCCTCGAGCGCGACCCCGAGTGCGGGTCGGCGCTGCTGCACGCACTCCAGGACGCCGACGACAAGGGCTACGC
CCAGGTGTGCGGTGCGCTGGCCGACTTCGACGTGCGCGACCGGCTCGGCGAGATCGCGGCTCCGGTGCTCGCCGTGGCGG
GTGCGGACGACGTCGTCTGCCCGCCGGAGCTGCTCCAGTCGGTCGCCGAGGGGGTGCAGCGCGGCCGGGCGGTCACGCTG
GGAGGGGTCGCCCATCTCGCGCCGGCCGAGGCGCCCGACGAGGTGGCCCGGCTGCTGCGCCGGCACCTGCTCGGCGAGCA
GCCCGTCGACGCCCGGCCGGTGCCGAGCGACGAGCGGTACGCCGCCGGGCTCGCCGTACGCCGCGAGGTGCTCGGCGACG
AGCACGTCGACCGGGCCACCGCGGCCGTCACCGACCTGACCGGGGACTTCCAGGAGCTGATCACCCGCTACGCCTGGGGC
GAGATCTGGACCCGGCCCGGCCTGGACCGGCGCAGCCGCTCGATGATCACCCTCACCGCGCTGGTAGCCCGCGGCCACCA
CGAGGAGCTCGCGCTGCACCTGCGCGCCGCCCTGCGCAACGGCCTCAGTGTCGCCGAGATCAAGGAGGTCCTGCTCCAGA
CCGCGGTCTACTGCGGCGTCCCCGACGCCAACACCGCCTTCCGGATCGCCCAGGAGGTGCTGGGGGAGGACGGCGCCGGC
TCGCTGTAA

Upstream 100 bases:

>100_bases
AGGTCGCCGGACGCCCACCCGCCCCGTCGTACCTCGGCGACGCGGACCGCCAGGTCGACCGCGCCGTCGCGCGTGGCCGC
AAGCTCCTCGAAAGGGACCG

Downstream 100 bases:

>100_bases
CGCCCGGTTACCCTGCCCACCGGCCCAGCTGCAGCACGGTGGGAGGAAGGGGTAACAGGGCGTTACAGGTGGACACGCGC
CCCCTGCTGAGCGGCCCCGG

Product: 4-carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MNPTVTAVRMTLTQHRSDLPLLVLGPSLGTTATTLWSACAGHLADAFDILAWDLPGHGHNRAAAEAFTMAGLAAGVLHVV
DEVLAERGEPGGSFHYAGDSVGGAVGLQLLLDAPERVTAAVLLCTGPQIGTAESWTERIEKVRSSGTSSLVSASAERWFA
PGFLERDPECGSALLHALQDADDKGYAQVCGALADFDVRDRLGEIAAPVLAVAGADDVVCPPELLQSVAEGVQRGRAVTL
GGVAHLAPAEAPDEVARLLRRHLLGEQPVDARPVPSDERYAAGLAVRREVLGDEHVDRATAAVTDLTGDFQELITRYAWG
EIWTRPGLDRRSRSMITLTALVARGHHEELALHLRAALRNGLSVAEIKEVLLQTAVYCGVPDANTAFRIAQEVLGEDGAG
SL

Sequences:

>Translated_402_residues
MNPTVTAVRMTLTQHRSDLPLLVLGPSLGTTATTLWSACAGHLADAFDILAWDLPGHGHNRAAAEAFTMAGLAAGVLHVV
DEVLAERGEPGGSFHYAGDSVGGAVGLQLLLDAPERVTAAVLLCTGPQIGTAESWTERIEKVRSSGTSSLVSASAERWFA
PGFLERDPECGSALLHALQDADDKGYAQVCGALADFDVRDRLGEIAAPVLAVAGADDVVCPPELLQSVAEGVQRGRAVTL
GGVAHLAPAEAPDEVARLLRRHLLGEQPVDARPVPSDERYAAGLAVRREVLGDEHVDRATAAVTDLTGDFQELITRYAWG
EIWTRPGLDRRSRSMITLTALVARGHHEELALHLRAALRNGLSVAEIKEVLLQTAVYCGVPDANTAFRIAQEVLGEDGAG
SL
>Mature_402_residues
MNPTVTAVRMTLTQHRSDLPLLVLGPSLGTTATTLWSACAGHLADAFDILAWDLPGHGHNRAAAEAFTMAGLAAGVLHVV
DEVLAERGEPGGSFHYAGDSVGGAVGLQLLLDAPERVTAAVLLCTGPQIGTAESWTERIEKVRSSGTSSLVSASAERWFA
PGFLERDPECGSALLHALQDADDKGYAQVCGALADFDVRDRLGEIAAPVLAVAGADDVVCPPELLQSVAEGVQRGRAVTL
GGVAHLAPAEAPDEVARLLRRHLLGEQPVDARPVPSDERYAAGLAVRREVLGDEHVDRATAAVTDLTGDFQELITRYAWG
EIWTRPGLDRRSRSMITLTALVARGHHEELALHLRAALRNGLSVAEIKEVLLQTAVYCGVPDANTAFRIAQEVLGEDGAG
SL

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 42444; Mature: 42444

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPTVTAVRMTLTQHRSDLPLLVLGPSLGTTATTLWSACAGHLADAFDILAWDLPGHGHN
CCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
RAAAEAFTMAGLAAGVLHVVDEVLAERGEPGGSFHYAGDSVGGAVGLQLLLDAPERVTAA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCHHHHEE
VLLCTGPQIGTAESWTERIEKVRSSGTSSLVSASAERWFAPGFLERDPECGSALLHALQD
EEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC
ADDKGYAQVCGALADFDVRDRLGEIAAPVLAVAGADDVVCPPELLQSVAEGVQRGRAVTL
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEE
GGVAHLAPAEAPDEVARLLRRHLLGEQPVDARPVPSDERYAAGLAVRREVLGDEHVDRAT
CCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHH
AAVTDLTGDFQELITRYAWGEIWTRPGLDRRSRSMITLTALVARGHHEELALHLRAALRN
HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
GLSVAEIKEVLLQTAVYCGVPDANTAFRIAQEVLGEDGAGSL
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNPTVTAVRMTLTQHRSDLPLLVLGPSLGTTATTLWSACAGHLADAFDILAWDLPGHGHN
CCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
RAAAEAFTMAGLAAGVLHVVDEVLAERGEPGGSFHYAGDSVGGAVGLQLLLDAPERVTAA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCHHHHEE
VLLCTGPQIGTAESWTERIEKVRSSGTSSLVSASAERWFAPGFLERDPECGSALLHALQD
EEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC
ADDKGYAQVCGALADFDVRDRLGEIAAPVLAVAGADDVVCPPELLQSVAEGVQRGRAVTL
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEE
GGVAHLAPAEAPDEVARLLRRHLLGEQPVDARPVPSDERYAAGLAVRREVLGDEHVDRAT
CCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHH
AAVTDLTGDFQELITRYAWGEIWTRPGLDRRSRSMITLTALVARGHHEELALHLRAALRN
HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
GLSVAEIKEVLLQTAVYCGVPDANTAFRIAQEVLGEDGAGSL
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]