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The map label for this gene is 119715249

Identifier: 119715249

GI number: 119715249

Start: 1059033

End: 1060097

Strand: Direct

Name: 119715249

Synonym: Noca_1006

Alternate gene names: NA

Gene position: 1059033-1060097 (Clockwise)

Preceding gene: 119715248

Following gene: 119715252

Centisome position: 21.24

GC content: 76.34

Gene sequence:

>1065_bases
GTGGCCCCGGGCCCTGAGCGGGCGCGTCCTGCCGGGACGACCCTGGGGTGTCGGGGTCCGGGCCCTCCGGGCCCCTCCGG
GGAGGGCGTGATGGAGCTGCCGACCGGGTTCGACGCCGAGGACCTGGGCGAGGTCCTCGACGCGCTCCCGTCGCTGGTCG
CGTACGTCGACGCCGCGGGCGGTCTGCGCTACGCGAACGCGGCATCCCGGTCCTGGCTGCACCGGACACCCGCTGAGGTC
GTCGGGCGCCCGGTGGAGCAGCTGCTCGACGAGGCCGGGTGCGCGTCGACCCATGACCGGCTCCTCGCCGCCCTCGCGGG
CACCACCCAGCGCTTCGAGCGCTCGCTCCCGCTGGACGAGGGTCGGGTGCGGCACGCGCTGATCGAGATGGTCCCGCGGT
GTCGCGGGGACCGCTCCGACGGGTGCTACGTGCTGGTCACCAACATCACCCGGCGCGTCGAGGCCGAGGCCGGGCACGCC
GCCAGCGTGGTGCGCTCGGCGCTGCTGACGGAGCGGAACGCGCGGGCGGCCGGCGTCAGCGACTCGGCACTCCAGGAGCT
CTTCGCGATCGGGCTCCAGCTCGATCGGATGGTGCGCCACCCCGAGTCGGCGACCGCCGAGGCAGCCCCGATCCTCGAGC
ACCTCGCGCGCACCGTCGACGCCCTGCGCGGCTCGGTGCGGCACCTGATCGTCGAGTCCCAGCCGGGCTCCACGTCCGGG
GCGGTGCGCTACGTGGTCGAGCTGTGGTCGGGCGGCCCGGTCGGCTTCGAGGGGCCGGTCGACGACCTGGCGCCGGAGGT
GGCGCACGAGCTGCTCGGTGCGCTGAGCGAGATCCTCGCGGCCGCCGCCCGGCACGACCCCGAGGGGATCGCCGTGCACG
TGCGGGTGGCCGGTGGAGTGCTGGTGGCGGTCGTGACGGTCCAGGGCGGCCGCCGCGGCGACGGCCCCGTGGGCACCGAC
GTCGAGGCCCTCGGGCCGCGGACCCTGCGACCGGGCGCGACGATCACCGTGGTCGGTGACGACCTCGCGCGCACCCTGAT
CACCTGGCGCCGCCCGGTCGGCTGA

Upstream 100 bases:

>100_bases
GGCGCGACCCGATCGCGCCCCTGAGCCTTTGGTCCTCGGGTCCCGGCGCCCGCCGTGTCGCGTGGCCCGGGCCACCTCGG
GGCCAAGGTCCCCGACGGTC

Downstream 100 bases:

>100_bases
CCCCGCAGCGGAGCGGCGGGTGTCGCCGCCGACCGCGCCATCCCCTGTCGTGGCACGGCCGGCGGCCGCCTGAGGGGGCG
GCGCCGGCGTTGCCCAGAGG

Product: PAS domain-containing protein

Products: NA

Alternate protein names: Multi-Sensor Hybrid Histidine Kinase; PAS Sensor Protein; Diguanylate Cyclase With PAS/PAC Sensor; Histidine Kinase-Response Regulator Hybrid Protein; PAS/PAC Sensor Signal Transduction Histidine Kinase; PAS Domain-Containing Protein; PAS/PAC Sensor Protein

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MAPGPERARPAGTTLGCRGPGPPGPSGEGVMELPTGFDAEDLGEVLDALPSLVAYVDAAGGLRYANAASRSWLHRTPAEV
VGRPVEQLLDEAGCASTHDRLLAALAGTTQRFERSLPLDEGRVRHALIEMVPRCRGDRSDGCYVLVTNITRRVEAEAGHA
ASVVRSALLTERNARAAGVSDSALQELFAIGLQLDRMVRHPESATAEAAPILEHLARTVDALRGSVRHLIVESQPGSTSG
AVRYVVELWSGGPVGFEGPVDDLAPEVAHELLGALSEILAAAARHDPEGIAVHVRVAGGVLVAVVTVQGGRRGDGPVGTD
VEALGPRTLRPGATITVVGDDLARTLITWRRPVG

Sequences:

>Translated_354_residues
MAPGPERARPAGTTLGCRGPGPPGPSGEGVMELPTGFDAEDLGEVLDALPSLVAYVDAAGGLRYANAASRSWLHRTPAEV
VGRPVEQLLDEAGCASTHDRLLAALAGTTQRFERSLPLDEGRVRHALIEMVPRCRGDRSDGCYVLVTNITRRVEAEAGHA
ASVVRSALLTERNARAAGVSDSALQELFAIGLQLDRMVRHPESATAEAAPILEHLARTVDALRGSVRHLIVESQPGSTSG
AVRYVVELWSGGPVGFEGPVDDLAPEVAHELLGALSEILAAAARHDPEGIAVHVRVAGGVLVAVVTVQGGRRGDGPVGTD
VEALGPRTLRPGATITVVGDDLARTLITWRRPVG
>Mature_353_residues
APGPERARPAGTTLGCRGPGPPGPSGEGVMELPTGFDAEDLGEVLDALPSLVAYVDAAGGLRYANAASRSWLHRTPAEVV
GRPVEQLLDEAGCASTHDRLLAALAGTTQRFERSLPLDEGRVRHALIEMVPRCRGDRSDGCYVLVTNITRRVEAEAGHAA
SVVRSALLTERNARAAGVSDSALQELFAIGLQLDRMVRHPESATAEAAPILEHLARTVDALRGSVRHLIVESQPGSTSGA
VRYVVELWSGGPVGFEGPVDDLAPEVAHELLGALSEILAAAARHDPEGIAVHVRVAGGVLVAVVTVQGGRRGDGPVGTDV
EALGPRTLRPGATITVVGDDLARTLITWRRPVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37005; Mature: 36874

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPGPERARPAGTTLGCRGPGPPGPSGEGVMELPTGFDAEDLGEVLDALPSLVAYVDAAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC
GLRYANAASRSWLHRTPAEVVGRPVEQLLDEAGCASTHDRLLAALAGTTQRFERSLPLDE
CCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
GRVRHALIEMVPRCRGDRSDGCYVLVTNITRRVEAEAGHAASVVRSALLTERNARAAGVS
HHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC
DSALQELFAIGLQLDRMVRHPESATAEAAPILEHLARTVDALRGSVRHLIVESQPGSTSG
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHH
AVRYVVELWSGGPVGFEGPVDDLAPEVAHELLGALSEILAAAARHDPEGIAVHVRVAGGV
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCE
LVAVVTVQGGRRGDGPVGTDVEALGPRTLRPGATITVVGDDLARTLITWRRPVG
EEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCEEEEECHHHHHHHHHHCCCCC
>Mature Secondary Structure 
APGPERARPAGTTLGCRGPGPPGPSGEGVMELPTGFDAEDLGEVLDALPSLVAYVDAAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC
GLRYANAASRSWLHRTPAEVVGRPVEQLLDEAGCASTHDRLLAALAGTTQRFERSLPLDE
CCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
GRVRHALIEMVPRCRGDRSDGCYVLVTNITRRVEAEAGHAASVVRSALLTERNARAAGVS
HHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC
DSALQELFAIGLQLDRMVRHPESATAEAAPILEHLARTVDALRGSVRHLIVESQPGSTSG
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHH
AVRYVVELWSGGPVGFEGPVDDLAPEVAHELLGALSEILAAAARHDPEGIAVHVRVAGGV
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCE
LVAVVTVQGGRRGDGPVGTDVEALGPRTLRPGATITVVGDDLARTLITWRRPVG
EEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCEEEEECHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA