Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119715207
Identifier: 119715207
GI number: 119715207
Start: 1010857
End: 1011603
Strand: Direct
Name: 119715207
Synonym: Noca_0962
Alternate gene names: NA
Gene position: 1010857-1011603 (Clockwise)
Preceding gene: 119715206
Following gene: 119715210
Centisome position: 20.27
GC content: 74.56
Gene sequence:
>747_bases GTGAGCACCGCGCCGTTCTGGGTCAGCGCGTTCCTCGACTTCGCGCCCGACGACTTCGAGCGCGGCGTCGAGTTCTGGCA GGGCGTCACCGGCTACGAGCTCTCCGAGCGGCGCGGCGTCGACGGTGCCTTCGCCACGCTGGTGCCGCCGGACGGCGACG ACTACCTGCGCGTGCAGCGCCTGGGCGGGGGCGACGGGCGGGTGCACCTCGACCTGCACGTCGAGAGCCCGACCATCGCG GCCGAGGCCGCGATCGAGCTCGGCGCGCACGTGCTGATGCGGCACGAGCAGGGGTACGTCGTGCTCCGCTCGCCCGGGGG GTTCGTGTTCTGCTTCGTGCGCCACCACGCGTCGCGGCGCCCGGCGCCGGTGACCTGGGGCGCCGGGCGCTCCTACGTCG ACCAGGTGTGCCTGGACATCCCCCCGGAGCACCACTCGGCGGAGGTCGCGTTCTGGCAGGCGCTGACCGGCTGGGACTTC GAGGACCTCGACAACTCGGTCTCGCCGGAGTTCTCCCGGCTCCGGCCGCCCGACGAGCAGCCGCTGCGCTGGCTGCTGCA GCGCCTCGACGGCACCGGCGGCGCGGTCACCGCGCACCTCGACCTGGCCGCCGACGACCGGGAGGCCGAGGCGGCCCGGC ACGTCGAGCTGGGCGCCACGGTCGCCCGCGTCCACGAGCACTGGACGGTGCTGACCGACCCCGTCGGGACGGCGTACTGC ATCACGGGGAGGAAGCCGCCGCGTTGA
Upstream 100 bases:
>100_bases ATCCGGGCGGGCACACCCTGCTCGTGGACGGCACGGGCCGGGCCGAGGGTGACGACGTGGTCGTCACGCCGGCCGCCGCC ATCCTGCACCGGGCCGCCCC
Downstream 100 bases:
>100_bases CCCGCGTGGACCACGACGGGGCACGCCGACCTGATCCGCGAGTCCATCGACGGAGCCGTCGGGGAGTGACCTGCGACGCG GCCCGTTCCGACGTCAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MSTAPFWVSAFLDFAPDDFERGVEFWQGVTGYELSERRGVDGAFATLVPPDGDDYLRVQRLGGGDGRVHLDLHVESPTIA AEAAIELGAHVLMRHEQGYVVLRSPGGFVFCFVRHHASRRPAPVTWGAGRSYVDQVCLDIPPEHHSAEVAFWQALTGWDF EDLDNSVSPEFSRLRPPDEQPLRWLLQRLDGTGGAVTAHLDLAADDREAEAARHVELGATVARVHEHWTVLTDPVGTAYC ITGRKPPR
Sequences:
>Translated_248_residues MSTAPFWVSAFLDFAPDDFERGVEFWQGVTGYELSERRGVDGAFATLVPPDGDDYLRVQRLGGGDGRVHLDLHVESPTIA AEAAIELGAHVLMRHEQGYVVLRSPGGFVFCFVRHHASRRPAPVTWGAGRSYVDQVCLDIPPEHHSAEVAFWQALTGWDF EDLDNSVSPEFSRLRPPDEQPLRWLLQRLDGTGGAVTAHLDLAADDREAEAARHVELGATVARVHEHWTVLTDPVGTAYC ITGRKPPR >Mature_247_residues STAPFWVSAFLDFAPDDFERGVEFWQGVTGYELSERRGVDGAFATLVPPDGDDYLRVQRLGGGDGRVHLDLHVESPTIAA EAAIELGAHVLMRHEQGYVVLRSPGGFVFCFVRHHASRRPAPVTWGAGRSYVDQVCLDIPPEHHSAEVAFWQALTGWDFE DLDNSVSPEFSRLRPPDEQPLRWLLQRLDGTGGAVTAHLDLAADDREAEAARHVELGATVARVHEHWTVLTDPVGTAYCI TGRKPPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27442; Mature: 27311
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAPFWVSAFLDFAPDDFERGVEFWQGVTGYELSERRGVDGAFATLVPPDGDDYLRVQR CCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEECCCCCCEEEEEE LGGGDGRVHLDLHVESPTIAAEAAIELGAHVLMRHEQGYVVLRSPGGFVFCFVRHHASRR ECCCCCEEEEEEEECCCCHHHHHHHHHHHHEEEEECCCEEEEECCCCEEEEEEEHHCCCC PAPVTWGAGRSYVDQVCLDIPPEHHSAEVAFWQALTGWDFEDLDNSVSPEFSRLRPPDEQ CCCEEECCCHHHHHHHHHCCCCCCCCCCEEEEHHHCCCCHHHCCCCCCCCHHHCCCCCHH PLRWLLQRLDGTGGAVTAHLDLAADDREAEAARHVELGATVARVHEHWTVLTDPVGTAYC HHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEE ITGRKPPR ECCCCCCC >Mature Secondary Structure STAPFWVSAFLDFAPDDFERGVEFWQGVTGYELSERRGVDGAFATLVPPDGDDYLRVQR CCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEECCCCCCEEEEEE LGGGDGRVHLDLHVESPTIAAEAAIELGAHVLMRHEQGYVVLRSPGGFVFCFVRHHASRR ECCCCCEEEEEEEECCCCHHHHHHHHHHHHEEEEECCCEEEEECCCCEEEEEEEHHCCCC PAPVTWGAGRSYVDQVCLDIPPEHHSAEVAFWQALTGWDFEDLDNSVSPEFSRLRPPDEQ CCCEEECCCHHHHHHHHHCCCCCCCCCCEEEEHHHCCCCHHHCCCCCCCCHHHCCCCCHH PLRWLLQRLDGTGGAVTAHLDLAADDREAEAARHVELGATVARVHEHWTVLTDPVGTAYC HHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEE ITGRKPPR ECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA