Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119715206
Identifier: 119715206
GI number: 119715206
Start: 1010546
End: 1010860
Strand: Direct
Name: 119715206
Synonym: Noca_0961
Alternate gene names: NA
Gene position: 1010546-1010860 (Clockwise)
Preceding gene: 119715205
Following gene: 119715207
Centisome position: 20.27
GC content: 76.83
Gene sequence:
>315_bases ATGAGCATCCCGGTGGACCTCGCCGACCTCGCGGCGACGCTCGCGGACTTCGACCGCGGCTACCTGCTGACCACGACCGA CGGGCGGGTCAAGGCGGTGTCGGTGCGAGCCGCGCCGGCCGACGGCGTGCTGCGGATCGCCGCCCCCGGGGGCGGTTCGC TCGCGAACCTCGCCGCCAACCCGGGGGTCACCCTGCTGTTCGCGCCCCGCGATCCGGGCGGGCACACCCTGCTCGTGGAC GGCACGGGCCGGGCCGAGGGTGACGACGTGGTCGTCACGCCGGCCGCCGCCATCCTGCACCGGGCCGCCCCGTGA
Upstream 100 bases:
>100_bases CGGACGAGGAGGAGCGGCTGGCCGCCCTCGTCGCCGAGCTCACCGCCGGCGCCGCGGAAACACGTGCCGCCGGCGAGCGC TGGGTCGATAGCCTCACCAC
Downstream 100 bases:
>100_bases GCACCGCGCCGTTCTGGGTCAGCGCGTTCCTCGACTTCGCGCCCGACGACTTCGAGCGCGGCGTCGAGTTCTGGCAGGGC GTCACCGGCTACGAGCTCTC
Product: pyridoxamine 5'-phosphate oxidase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MSIPVDLADLAATLADFDRGYLLTTTDGRVKAVSVRAAPADGVLRIAAPGGGSLANLAANPGVTLLFAPRDPGGHTLLVD GTGRAEGDDVVVTPAAAILHRAAP
Sequences:
>Translated_104_residues MSIPVDLADLAATLADFDRGYLLTTTDGRVKAVSVRAAPADGVLRIAAPGGGSLANLAANPGVTLLFAPRDPGGHTLLVD GTGRAEGDDVVVTPAAAILHRAAP >Mature_103_residues SIPVDLADLAATLADFDRGYLLTTTDGRVKAVSVRAAPADGVLRIAAPGGGSLANLAANPGVTLLFAPRDPGGHTLLVDG TGRAEGDDVVVTPAAAILHRAAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10366; Mature: 10235
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPVDLADLAATLADFDRGYLLTTTDGRVKAVSVRAAPADGVLRIAAPGGGSLANLAAN CCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCCCCEEEEECCCCCCEEEEECC PGVTLLFAPRDPGGHTLLVDGTGRAEGDDVVVTPAAAILHRAAP CCEEEEEECCCCCCCEEEEECCCCCCCCCEEEECHHHHHCCCCC >Mature Secondary Structure SIPVDLADLAATLADFDRGYLLTTTDGRVKAVSVRAAPADGVLRIAAPGGGSLANLAAN CCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCCCCEEEEECCCCCCEEEEECC PGVTLLFAPRDPGGHTLLVDGTGRAEGDDVVVTPAAAILHRAAP CCEEEEEECCCCCCCEEEEECCCCCCCCCEEEECHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA